RNA–Protein interactions for RNA: ENST00000491344.7

SLC38A6-204, Transcript of solute carrier family 38 member 6, humanhuman

TSL 1 (best)

Gene SLC38A6, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-204ENST00000491344 NISCHQ9Y2I1 1504 aa19.64■□□□□ 0.74
SLC38A6-204ENST00000491344 CCDC180Q9P1Z9 1646 aa17.09■□□□□ 0.33
SLC38A6-204ENST00000491344 ZCCHC6Q5VYS8 1495 aaKnown RBP16.49■□□□□ 0.23
SLC38A6-204ENST00000491344 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
SLC38A6-204ENST00000491344 ABCC9O60706 1549 aa16.36■□□□□ 0.21
SLC38A6-204ENST00000491344 SHROOM4Q9ULL8 1493 aa16.17■□□□□ 0.18
SLC38A6-204ENST00000491344 DCAF1Q9Y4B6 1507 aa16.15■□□□□ 0.18
SLC38A6-204ENST00000491344 MYO15BQ96JP2 1530 aa15.95■□□□□ 0.14
SLC38A6-204ENST00000491344 NACADO15069 1562 aa15.93■□□□□ 0.14
SLC38A6-204ENST00000491344 SCRIBQ14160 1630 aa15.85■□□□□ 0.13
SLC38A6-204ENST00000491344 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
SLC38A6-204ENST00000491344 UNC13AQ9UPW8 1703 aa15.59■□□□□ 0.09
SLC38A6-204ENST00000491344 SUPT5HO00267 1087 aaKnown RBP15.5■□□□□ 0.07
SLC38A6-204ENST00000491344 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
SLC38A6-204ENST00000491344 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
SLC38A6-204ENST00000491344 CECR2Q9BXF3 1484 aa15.35■□□□□ 0.05
SLC38A6-204ENST00000491344 RSF1Q96T23 1441 aaPredicted RBP15.25■□□□□ 0.03
SLC38A6-204ENST00000491344 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
SLC38A6-204ENST00000491344 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
SLC38A6-204ENST00000491344 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
SLC38A6-204ENST00000491344 WIZO95785 1651 aa15.12■□□□□ 0.01
SLC38A6-204ENST00000491344 EIF4G1Q04637 1599 aaKnown RBP14.95□□□□□ -0.02
SLC38A6-204ENST00000491344 TOP2AP11388 1531 aaKnown RBP14.89□□□□□ -0.03
SLC38A6-204ENST00000491344 ATAD2BQ9ULI0 1458 aa14.88□□□□□ -0.03
SLC38A6-204ENST00000491344 PEG3Q9GZU2 1588 aa14.88□□□□□ -0.03
SLC38A6-204ENST00000491344 SMARCA2P51531 1590 aa14.83□□□□□ -0.04
SLC38A6-204ENST00000491344 BAZ1BQ9UIG0 1483 aaKnown RBP14.81□□□□□ -0.04
SLC38A6-204ENST00000491344 CCDC88BA6NC98 1476 aa14.77□□□□□ -0.04
SLC38A6-204ENST00000491344 CC2D2AQ9P2K1 1620 aa14.76□□□□□ -0.05
SLC38A6-204ENST00000491344 CHIC1Q5VXU3 224 aa14.74□□□□□ -0.05
SLC38A6-204ENST00000491344 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
SLC38A6-204ENST00000491344 HMGXB3Q12766 1538 aa14.7□□□□□ -0.06
SLC38A6-204ENST00000491344 DNAJC5BQ9UF47 199 aa14.53□□□□□ -0.08
SLC38A6-204ENST00000491344 ABCC8Q09428 1581 aa14.52□□□□□ -0.09
SLC38A6-204ENST00000491344 TRIM41Q8WV44 630 aa14.5□□□□□ -0.09
SLC38A6-204ENST00000491344 CFTRP13569 1480 aa14.4□□□□□ -0.1
SLC38A6-204ENST00000491344 CADPSQ9ULU8 1353 aa14.37□□□□□ -0.11
SLC38A6-204ENST00000491344 NESP48681 1621 aa14.36□□□□□ -0.11
SLC38A6-204ENST00000491344 WRNQ14191 1432 aaPredicted RBP eCLIP14.35□□□□□ -0.11
SLC38A6-204ENST00000491344 FAM9AQ8IZU1 332 aaPredicted RBP14.34□□□□□ -0.11
SLC38A6-204ENST00000491344 SYNJ1O43426 1573 aa14.33□□□□□ -0.12
SLC38A6-204ENST00000491344 PRDM2Q13029 1718 aa14.31□□□□□ -0.12
SLC38A6-204ENST00000491344 LOC105371045A0A1W2PR82 267 aa14.25□□□□□ -0.13
SLC38A6-204ENST00000491344 FANCD2Q9BXW9 1451 aa14.24□□□□□ -0.13
SLC38A6-204ENST00000491344 LAMC3Q9Y6N6 1575 aa14.23□□□□□ -0.13
SLC38A6-204ENST00000491344 CUX1P39880 1505 aa14.23□□□□□ -0.13
SLC38A6-204ENST00000491344 EHMT2Q96KQ7 1210 aa14.23□□□□□ -0.13
SLC38A6-204ENST00000491344 TOP2BQ02880 1626 aa14.22□□□□□ -0.13
SLC38A6-204ENST00000491344 SOGA1O94964 1423 aa14.21□□□□□ -0.13
SLC38A6-204ENST00000491344 BIVM-ERCC5R4GMW8 1640 aa14.2□□□□□ -0.14
SLC38A6-204ENST00000491344 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
SLC38A6-204ENST00000491344 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
SLC38A6-204ENST00000491344 CEP164Q9UPV0 1460 aa14.15□□□□□ -0.14
SLC38A6-204ENST00000491344 PDS5BQ9NTI5 1447 aa14.13□□□□□ -0.15
SLC38A6-204ENST00000491344 FGD5Q6ZNL6 1462 aa14.09□□□□□ -0.15
SLC38A6-204ENST00000491344 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.15
SLC38A6-204ENST00000491344 TOPBP1Q92547 1522 aa14.08□□□□□ -0.16
SLC38A6-204ENST00000491344 DNMBPQ6XZF7 1577 aa14.07□□□□□ -0.16
SLC38A6-204ENST00000491344 CSRNP3Q8WYN3 585 aa14.04□□□□□ -0.16
SLC38A6-204ENST00000491344 EEA1Q15075 1411 aa14.03□□□□□ -0.16
SLC38A6-204ENST00000491344 POLA1P09884 1462 aaPredicted RBP14.02□□□□□ -0.17
SLC38A6-204ENST00000491344 RAD54L2Q9Y4B4 1467 aa14.02□□□□□ -0.17
SLC38A6-204ENST00000491344 ERCC6Q03468 1493 aa14□□□□□ -0.17
SLC38A6-204ENST00000491344 CUX2O14529 1486 aa13.99□□□□□ -0.17
SLC38A6-204ENST00000491344 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
SLC38A6-204ENST00000491344 KIF27Q86VH2 1401 aa13.96□□□□□ -0.17
SLC38A6-204ENST00000491344 UBTFP17480 764 aaKnown RBP13.91□□□□□ -0.18
SLC38A6-204ENST00000491344 RAPGEF2Q9Y4G8 1499 aa13.91□□□□□ -0.18
SLC38A6-204ENST00000491344 GOLGA3Q08378 1498 aa13.91□□□□□ -0.18
SLC38A6-204ENST00000491344 ABCA10Q8WWZ4 1543 aa13.91□□□□□ -0.18
SLC38A6-204ENST00000491344 KIF21BO75037 1637 aa13.9□□□□□ -0.18
SLC38A6-204ENST00000491344 THOC2Q8NI27 1593 aaKnown RBP13.9□□□□□ -0.18
SLC38A6-204ENST00000491344 WDR62O43379 1518 aa13.89□□□□□ -0.19
SLC38A6-204ENST00000491344 WDR97A6NE52 1622 aa13.89□□□□□ -0.19
SLC38A6-204ENST00000491344 TDRD9Q8NDG6 1382 aaKnown RBP13.88□□□□□ -0.19
SLC38A6-204ENST00000491344 IGF1RP08069 1367 aa13.86□□□□□ -0.19
SLC38A6-204ENST00000491344 TARBP1Q13395 1621 aaKnown RBP13.86□□□□□ -0.19
SLC38A6-204ENST00000491344 PRXQ9BXM0 1461 aa13.86□□□□□ -0.19
SLC38A6-204ENST00000491344 TNIKQ9UKE5 1360 aa13.84□□□□□ -0.19
SLC38A6-204ENST00000491344 RANGAP1P46060 587 aaPredicted RBP13.82□□□□□ -0.2
SLC38A6-204ENST00000491344 ABCA5Q8WWZ7 1642 aa13.82□□□□□ -0.2
SLC38A6-204ENST00000491344 CEP162Q5TB80 1403 aa13.82□□□□□ -0.2
SLC38A6-204ENST00000491344 AQRO60306 1485 aaKnown RBP eCLIP13.8□□□□□ -0.2
SLC38A6-204ENST00000491344 GAPVD1Q14C86 1478 aa13.8□□□□□ -0.2
SLC38A6-204ENST00000491344 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
SLC38A6-204ENST00000491344 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
SLC38A6-204ENST00000491344 CARMIL1Q5VZK9 1371 aa13.8□□□□□ -0.2
SLC38A6-204ENST00000491344 IFT140Q96RY7 1462 aa13.78□□□□□ -0.2
SLC38A6-204ENST00000491344 PBRM1Q86U86 1689 aa13.74□□□□□ -0.21
SLC38A6-204ENST00000491344 CUL7Q14999 1698 aa13.73□□□□□ -0.21
SLC38A6-204ENST00000491344 EIF4G3O43432 1585 aaKnown RBP13.72□□□□□ -0.21
SLC38A6-204ENST00000491344 CLIP1P30622 1438 aa13.71□□□□□ -0.22
SLC38A6-204ENST00000491344 GRIN2BQ13224 1484 aa13.68□□□□□ -0.22
SLC38A6-204ENST00000491344 PPARGC1BQ86YN6 1023 aaKnown RBP13.66□□□□□ -0.22
SLC38A6-204ENST00000491344 ADAMTS12P58397 1594 aa13.65□□□□□ -0.22
SLC38A6-204ENST00000491344 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.22
SLC38A6-204ENST00000491344 FHAD1B1AJZ9 1412 aa13.62□□□□□ -0.23
SLC38A6-204ENST00000491344 CTTNBP2Q8WZ74 1663 aa13.61□□□□□ -0.23
SLC38A6-204ENST00000491344 ARAP1Q96P48 1450 aa13.59□□□□□ -0.23
SLC38A6-204ENST00000491344 ARHGAP35Q9NRY4 1499 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms