RNA–Protein interactions for RNA: ENST00000491220.1

ATRAID-206, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 2

Gene ATRAID, Length 198 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-206ENST00000491220 NISCHQ9Y2I1 1504 aa7.15□□□□□ -1.27
ATRAID-206ENST00000491220 ABCC9O60706 1549 aa6.74□□□□□ -1.33
ATRAID-206ENST00000491220 DNAJC5BQ9UF47 199 aa6.51□□□□□ -1.37
ATRAID-206ENST00000491220 CCDC180Q9P1Z9 1646 aa6.5□□□□□ -1.37
ATRAID-206ENST00000491220 RB1CC1Q8TDY2 1594 aa6.29□□□□□ -1.4
ATRAID-206ENST00000491220 PABPN1Q86U42 306 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATRAID-206ENST00000491220 UNC13AQ9UPW8 1703 aa6.19□□□□□ -1.42
ATRAID-206ENST00000491220 NACADO15069 1562 aa6.18□□□□□ -1.42
ATRAID-206ENST00000491220 BICRAQ9NZM4 1560 aa6.14□□□□□ -1.43
ATRAID-206ENST00000491220 DCAF8L2P0C7V8 631 aa6.12□□□□□ -1.43
ATRAID-206ENST00000491220 DNAJC5Q9H3Z4 198 aa6.09□□□□□ -1.43
ATRAID-206ENST00000491220 CECR2Q9BXF3 1484 aa6.08□□□□□ -1.44
ATRAID-206ENST00000491220 CC2D2AQ9P2K1 1620 aa6.07□□□□□ -1.44
ATRAID-206ENST00000491220 MYO15BQ96JP2 1530 aa6.01□□□□□ -1.45
ATRAID-206ENST00000491220 EIF4G1Q04637 1599 aaKnown RBP6□□□□□ -1.45
ATRAID-206ENST00000491220 SHROOM4Q9ULL8 1493 aa5.98□□□□□ -1.45
ATRAID-206ENST00000491220 SCRIBQ14160 1630 aa5.96□□□□□ -1.46
ATRAID-206ENST00000491220 ZCCHC6Q5VYS8 1495 aaKnown RBP5.89□□□□□ -1.47
ATRAID-206ENST00000491220 DCAF1Q9Y4B6 1507 aa5.87□□□□□ -1.47
ATRAID-206ENST00000491220 CUX2O14529 1486 aa5.86□□□□□ -1.47
ATRAID-206ENST00000491220 ERCC6Q03468 1493 aa5.82□□□□□ -1.48
ATRAID-206ENST00000491220 TRIM41Q8WV44 630 aa5.77□□□□□ -1.49
ATRAID-206ENST00000491220 NESP48681 1621 aa5.74□□□□□ -1.49
ATRAID-206ENST00000491220 THOC2Q8NI27 1593 aaKnown RBP5.72□□□□□ -1.49
ATRAID-206ENST00000491220 NCAPD3P42695 1498 aa5.71□□□□□ -1.5
ATRAID-206ENST00000491220 ATAD2BQ9ULI0 1458 aa5.69□□□□□ -1.5
ATRAID-206ENST00000491220 SMARCA2P51531 1590 aa5.68□□□□□ -1.5
ATRAID-206ENST00000491220 CHIC1Q5VXU3 224 aa5.68□□□□□ -1.5
ATRAID-206ENST00000491220 HMGXB3Q12766 1538 aa5.66□□□□□ -1.5
ATRAID-206ENST00000491220 KIF21AQ7Z4S6 1674 aa5.66□□□□□ -1.5
ATRAID-206ENST00000491220 AEBP2Q6ZN18 517 aaPredicted RBP5.65□□□□□ -1.5
ATRAID-206ENST00000491220 SMARCA4P51532 1647 aa5.63□□□□□ -1.51
ATRAID-206ENST00000491220 LAMC3Q9Y6N6 1575 aa5.63□□□□□ -1.51
ATRAID-206ENST00000491220 BAZ1BQ9UIG0 1483 aaKnown RBP5.62□□□□□ -1.51
ATRAID-206ENST00000491220 BAZ1AQ9NRL2 1556 aaPredicted RBP5.6□□□□□ -1.51
ATRAID-206ENST00000491220 PDS5BQ9NTI5 1447 aa5.58□□□□□ -1.52
ATRAID-206ENST00000491220 MRC2Q9UBG0 1479 aa5.58□□□□□ -1.52
ATRAID-206ENST00000491220 WDR62O43379 1518 aa5.57□□□□□ -1.52
ATRAID-206ENST00000491220 PEG3Q9GZU2 1588 aa5.56□□□□□ -1.52
ATRAID-206ENST00000491220 OSCARQ8IYS5 282 aa5.54□□□□□ -1.52
ATRAID-206ENST00000491220 RIMBP3CA6NJZ7 1639 aa5.54□□□□□ -1.52
ATRAID-206ENST00000491220 RIMBP3BA6NNM3 1639 aa5.54□□□□□ -1.52
ATRAID-206ENST00000491220 RIMBP3Q9UFD9 1639 aa5.54□□□□□ -1.52
ATRAID-206ENST00000491220 MROH2BQ7Z745 1585 aa5.53□□□□□ -1.52
ATRAID-206ENST00000491220 CADPSQ9ULU8 1353 aa5.53□□□□□ -1.52
ATRAID-206ENST00000491220 CEP164Q9UPV0 1460 aa5.51□□□□□ -1.53
ATRAID-206ENST00000491220 ARHGEF11O15085 1522 aa5.49□□□□□ -1.53
ATRAID-206ENST00000491220 FANCD2Q9BXW9 1451 aa5.49□□□□□ -1.53
ATRAID-206ENST00000491220 URB2Q14146 1524 aaKnown RBP5.47□□□□□ -1.53
ATRAID-206ENST00000491220 TRHP20396 242 aaPredicted RBP5.46□□□□□ -1.54
ATRAID-206ENST00000491220 WIZO95785 1651 aa5.46□□□□□ -1.54
ATRAID-206ENST00000491220 CYB5RLQ6IPT4 315 aa5.45□□□□□ -1.54
ATRAID-206ENST00000491220 ZNF608Q9ULD9 1512 aaPredicted RBP5.44□□□□□ -1.54
ATRAID-206ENST00000491220 ARAP1Q96P48 1450 aa5.44□□□□□ -1.54
ATRAID-206ENST00000491220 CFTRP13569 1480 aa5.43□□□□□ -1.54
ATRAID-206ENST00000491220 CHD1O14646 1710 aa5.41□□□□□ -1.54
ATRAID-206ENST00000491220 EIF4G3O43432 1585 aaKnown RBP5.4□□□□□ -1.55
ATRAID-206ENST00000491220 IFT140Q96RY7 1462 aa5.39□□□□□ -1.55
ATRAID-206ENST00000491220 PRDM2Q13029 1718 aa5.38□□□□□ -1.55
ATRAID-206ENST00000491220 RSF1Q96T23 1441 aaPredicted RBP5.36□□□□□ -1.55
ATRAID-206ENST00000491220 TOPBP1Q92547 1522 aa5.36□□□□□ -1.55
ATRAID-206ENST00000491220 TOP2AP11388 1531 aaKnown RBP5.35□□□□□ -1.55
ATRAID-206ENST00000491220 AQRO60306 1485 aaKnown RBP eCLIP5.35□□□□□ -1.55
ATRAID-206ENST00000491220 FBLN2P98095 1184 aa5.35□□□□□ -1.55
ATRAID-206ENST00000491220 TARBP1Q13395 1621 aaKnown RBP5.34□□□□□ -1.56
ATRAID-206ENST00000491220 CLASP1Q7Z460 1538 aa5.33□□□□□ -1.56
ATRAID-206ENST00000491220 DNMBPQ6XZF7 1577 aa5.32□□□□□ -1.56
ATRAID-206ENST00000491220 POLA1P09884 1462 aaPredicted RBP5.3□□□□□ -1.56
ATRAID-206ENST00000491220 SNAPC4Q5SXM2 1469 aa5.3□□□□□ -1.56
ATRAID-206ENST00000491220 CCDC88BA6NC98 1476 aa5.29□□□□□ -1.56
ATRAID-206ENST00000491220 RAD54L2Q9Y4B4 1467 aa5.29□□□□□ -1.56
ATRAID-206ENST00000491220 SYNJ1O43426 1573 aa5.29□□□□□ -1.56
ATRAID-206ENST00000491220 ABCC8Q09428 1581 aa5.29□□□□□ -1.56
ATRAID-206ENST00000491220 TDRD9Q8NDG6 1382 aaKnown RBP5.29□□□□□ -1.56
ATRAID-206ENST00000491220 GAPVD1Q14C86 1478 aa5.27□□□□□ -1.57
ATRAID-206ENST00000491220 ILDR1Q86SU0 546 aaPredicted RBP5.26□□□□□ -1.57
ATRAID-206ENST00000491220 CHMP7Q8WUX9 453 aaPredicted RBP5.26□□□□□ -1.57
ATRAID-206ENST00000491220 ERCC6L2Q5T890 1561 aa5.25□□□□□ -1.57
ATRAID-206ENST00000491220 SOGA1O94964 1423 aa5.25□□□□□ -1.57
ATRAID-206ENST00000491220 MAGI1Q96QZ7 1491 aaPredicted RBP5.25□□□□□ -1.57
ATRAID-206ENST00000491220 SYNJ2O15056 1496 aa5.24□□□□□ -1.57
ATRAID-206ENST00000491220 FGD5Q6ZNL6 1462 aa5.24□□□□□ -1.57
ATRAID-206ENST00000491220 WDR97A6NE52 1622 aa5.23□□□□□ -1.57
ATRAID-206ENST00000491220 KIF13AQ9H1H9 1805 aa5.23□□□□□ -1.57
ATRAID-206ENST00000491220 GRIN2BQ13224 1484 aa5.23□□□□□ -1.57
ATRAID-206ENST00000491220 PBRM1Q86U86 1689 aa5.23□□□□□ -1.57
ATRAID-206ENST00000491220 CUX1P39880 1505 aa5.2□□□□□ -1.58
ATRAID-206ENST00000491220 KDM4FA0A1W2PPD8 638 aa5.2□□□□□ -1.58
ATRAID-206ENST00000491220 CEP170Q5SW79 1584 aa5.2□□□□□ -1.58
ATRAID-206ENST00000491220 ABCA5Q8WWZ7 1642 aa5.18□□□□□ -1.58
ATRAID-206ENST00000491220 GRIN2AQ12879 1464 aa5.17□□□□□ -1.58
ATRAID-206ENST00000491220 KDM6BO15054 1643 aa5.16□□□□□ -1.58
ATRAID-206ENST00000491220 SHROOM2Q13796 1616 aa5.16□□□□□ -1.58
ATRAID-206ENST00000491220 NUP160Q12769 1436 aa5.16□□□□□ -1.58
ATRAID-206ENST00000491220 FAM69CQ0P6D2 419 aa5.16□□□□□ -1.58
ATRAID-206ENST00000491220 ADAMTS12P58397 1594 aa5.16□□□□□ -1.58
ATRAID-206ENST00000491220 DIP2BQ9P265 1576 aa5.16□□□□□ -1.58
ATRAID-206ENST00000491220 TSPOAP1O95153 1857 aa5.15□□□□□ -1.58
ATRAID-206ENST00000491220 ABCC10Q5T3U5 1492 aa5.15□□□□□ -1.58
ATRAID-206ENST00000491220 ABCA10Q8WWZ4 1543 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms