RNA–Protein interactions for RNA: ENST00000490980.1

FRAT1-202, Transcript of FRAT1, WNT signaling pathway regulator, humanhuman

TSL 2

Gene FRAT1, Length 633 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAT1-202ENST00000490980 NISCHQ9Y2I1 1504 aa34.25■■■■□ 3.07
FRAT1-202ENST00000490980 CCDC180Q9P1Z9 1646 aa30.55■■■□□ 2.48
FRAT1-202ENST00000490980 ABCC9O60706 1549 aa29.71■■■□□ 2.35
FRAT1-202ENST00000490980 RB1CC1Q8TDY2 1594 aa28.67■■■□□ 2.18
FRAT1-202ENST00000490980 NACADO15069 1562 aa28.63■■■□□ 2.17
FRAT1-202ENST00000490980 ZCCHC6Q5VYS8 1495 aaKnown RBP28.54■■■□□ 2.16
FRAT1-202ENST00000490980 DCAF8L2P0C7V8 631 aa28.48■■■□□ 2.15
FRAT1-202ENST00000490980 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
FRAT1-202ENST00000490980 DCAF1Q9Y4B6 1507 aa28.37■■■□□ 2.13
FRAT1-202ENST00000490980 UNC13AQ9UPW8 1703 aa28.1■■■□□ 2.09
FRAT1-202ENST00000490980 SCRIBQ14160 1630 aa27.79■■■□□ 2.04
FRAT1-202ENST00000490980 BICRAQ9NZM4 1560 aa27.78■■■□□ 2.04
FRAT1-202ENST00000490980 PABPN1Q86U42 306 aaKnown RBP eCLIP27.7■■■□□ 2.02
FRAT1-202ENST00000490980 SHROOM4Q9ULL8 1493 aa27.52■■■□□ 2
FRAT1-202ENST00000490980 DNAJC5BQ9UF47 199 aa27.15■■□□□ 1.94
FRAT1-202ENST00000490980 EIF4G1Q04637 1599 aaKnown RBP27.04■■□□□ 1.92
FRAT1-202ENST00000490980 CC2D2AQ9P2K1 1620 aa26.93■■□□□ 1.9
FRAT1-202ENST00000490980 CECR2Q9BXF3 1484 aa26.69■■□□□ 1.86
FRAT1-202ENST00000490980 SMARCA4P51532 1647 aa26.61■■□□□ 1.85
FRAT1-202ENST00000490980 BAZ1AQ9NRL2 1556 aaPredicted RBP26.57■■□□□ 1.84
FRAT1-202ENST00000490980 SMARCA2P51531 1590 aa26.41■■□□□ 1.82
FRAT1-202ENST00000490980 MROH2BQ7Z745 1585 aa26.38■■□□□ 1.81
FRAT1-202ENST00000490980 ATAD2BQ9ULI0 1458 aa26.38■■□□□ 1.81
FRAT1-202ENST00000490980 NCAPD3P42695 1498 aa26.37■■□□□ 1.81
FRAT1-202ENST00000490980 PEG3Q9GZU2 1588 aa26.34■■□□□ 1.81
FRAT1-202ENST00000490980 HMGXB3Q12766 1538 aa26.3■■□□□ 1.8
FRAT1-202ENST00000490980 BAZ1BQ9UIG0 1483 aaKnown RBP26.19■■□□□ 1.78
FRAT1-202ENST00000490980 WIZO95785 1651 aa26.15■■□□□ 1.78
FRAT1-202ENST00000490980 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
FRAT1-202ENST00000490980 TOP2AP11388 1531 aaKnown RBP25.87■■□□□ 1.73
FRAT1-202ENST00000490980 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
FRAT1-202ENST00000490980 NESP48681 1621 aa25.72■■□□□ 1.71
FRAT1-202ENST00000490980 ERCC6Q03468 1493 aa25.61■■□□□ 1.69
FRAT1-202ENST00000490980 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
FRAT1-202ENST00000490980 KIF21AQ7Z4S6 1674 aa25.52■■□□□ 1.68
FRAT1-202ENST00000490980 CCDC88BA6NC98 1476 aa25.51■■□□□ 1.67
FRAT1-202ENST00000490980 PDS5BQ9NTI5 1447 aa25.49■■□□□ 1.67
FRAT1-202ENST00000490980 CFTRP13569 1480 aa25.47■■□□□ 1.67
FRAT1-202ENST00000490980 PRDM2Q13029 1718 aa25.45■■□□□ 1.66
FRAT1-202ENST00000490980 THOC2Q8NI27 1593 aaKnown RBP25.4■■□□□ 1.66
FRAT1-202ENST00000490980 SUPT5HO00267 1087 aaKnown RBP25.38■■□□□ 1.65
FRAT1-202ENST00000490980 CUX2O14529 1486 aa25.35■■□□□ 1.65
FRAT1-202ENST00000490980 FANCD2Q9BXW9 1451 aa25.32■■□□□ 1.64
FRAT1-202ENST00000490980 CEP164Q9UPV0 1460 aa25.3■■□□□ 1.64
FRAT1-202ENST00000490980 MRC2Q9UBG0 1479 aa25.26■■□□□ 1.63
FRAT1-202ENST00000490980 WDR62O43379 1518 aa25.19■■□□□ 1.62
FRAT1-202ENST00000490980 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
FRAT1-202ENST00000490980 ABCC8Q09428 1581 aa24.95■■□□□ 1.58
FRAT1-202ENST00000490980 DNMBPQ6XZF7 1577 aa24.94■■□□□ 1.58
FRAT1-202ENST00000490980 TOPBP1Q92547 1522 aa24.93■■□□□ 1.58
FRAT1-202ENST00000490980 IFT140Q96RY7 1462 aa24.76■■□□□ 1.55
FRAT1-202ENST00000490980 CUX1P39880 1505 aa24.76■■□□□ 1.55
FRAT1-202ENST00000490980 POLA1P09884 1462 aaPredicted RBP24.71■■□□□ 1.55
FRAT1-202ENST00000490980 TARBP1Q13395 1621 aaKnown RBP24.69■■□□□ 1.54
FRAT1-202ENST00000490980 FGD5Q6ZNL6 1462 aa24.67■■□□□ 1.54
FRAT1-202ENST00000490980 BIVM-ERCC5R4GMW8 1640 aa24.63■■□□□ 1.53
FRAT1-202ENST00000490980 ZNF608Q9ULD9 1512 aaPredicted RBP24.62■■□□□ 1.53
FRAT1-202ENST00000490980 EIF4G3O43432 1585 aaKnown RBP24.6■■□□□ 1.53
FRAT1-202ENST00000490980 TOP2BQ02880 1626 aa24.6■■□□□ 1.53
FRAT1-202ENST00000490980 WRNQ14191 1432 aaPredicted RBP eCLIP24.6■■□□□ 1.53
FRAT1-202ENST00000490980 SOGA1O94964 1423 aa24.59■■□□□ 1.53
FRAT1-202ENST00000490980 RAD54L2Q9Y4B4 1467 aa24.58■■□□□ 1.52
FRAT1-202ENST00000490980 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
FRAT1-202ENST00000490980 WDR97A6NE52 1622 aa24.56■■□□□ 1.52
FRAT1-202ENST00000490980 AQRO60306 1485 aaKnown RBP eCLIP24.46■■□□□ 1.51
FRAT1-202ENST00000490980 DNAJC5Q9H3Z4 198 aa24.45■■□□□ 1.5
FRAT1-202ENST00000490980 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
FRAT1-202ENST00000490980 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
FRAT1-202ENST00000490980 ABCA5Q8WWZ7 1642 aa24.39■■□□□ 1.49
FRAT1-202ENST00000490980 PBRM1Q86U86 1689 aa24.38■■□□□ 1.49
FRAT1-202ENST00000490980 CHD1O14646 1710 aa24.32■■□□□ 1.48
FRAT1-202ENST00000490980 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
FRAT1-202ENST00000490980 GAPVD1Q14C86 1478 aa24.32■■□□□ 1.48
FRAT1-202ENST00000490980 SNAPC4Q5SXM2 1469 aa24.28■■□□□ 1.48
FRAT1-202ENST00000490980 MAGI1Q96QZ7 1491 aaPredicted RBP24.27■■□□□ 1.48
FRAT1-202ENST00000490980 OSCARQ8IYS5 282 aa24.24■■□□□ 1.47
FRAT1-202ENST00000490980 SYNJ2O15056 1496 aa24.17■■□□□ 1.46
FRAT1-202ENST00000490980 ERICH3Q5RHP9 1530 aa24.16■■□□□ 1.46
FRAT1-202ENST00000490980 ADAMTS12P58397 1594 aa24.14■■□□□ 1.45
FRAT1-202ENST00000490980 FBLN2P98095 1184 aa24.13■■□□□ 1.45
FRAT1-202ENST00000490980 CHMP7Q8WUX9 453 aaPredicted RBP24.09■■□□□ 1.45
FRAT1-202ENST00000490980 KIF27Q86VH2 1401 aa24.08■■□□□ 1.44
FRAT1-202ENST00000490980 FHAD1B1AJZ9 1412 aa24.04■■□□□ 1.44
FRAT1-202ENST00000490980 GRIN2AQ12879 1464 aa24.01■■□□□ 1.43
FRAT1-202ENST00000490980 CLASP1Q7Z460 1538 aa24■■□□□ 1.43
FRAT1-202ENST00000490980 CUL7Q14999 1698 aa24■■□□□ 1.43
FRAT1-202ENST00000490980 TRIM41Q8WV44 630 aa23.98■■□□□ 1.43
FRAT1-202ENST00000490980 RIMBP3CA6NJZ7 1639 aa23.95■■□□□ 1.42
FRAT1-202ENST00000490980 RIMBP3BA6NNM3 1639 aa23.95■■□□□ 1.42
FRAT1-202ENST00000490980 RIMBP3Q9UFD9 1639 aa23.95■■□□□ 1.42
FRAT1-202ENST00000490980 IGF1RP08069 1367 aa23.93■■□□□ 1.42
FRAT1-202ENST00000490980 CEP170Q5SW79 1584 aa23.91■■□□□ 1.42
FRAT1-202ENST00000490980 ARHGEF11O15085 1522 aa23.91■■□□□ 1.42
FRAT1-202ENST00000490980 NUP160Q12769 1436 aa23.9■■□□□ 1.42
FRAT1-202ENST00000490980 RUSC2Q8N2Y8 1516 aa23.85■■□□□ 1.41
FRAT1-202ENST00000490980 CARMIL1Q5VZK9 1371 aa23.8■■□□□ 1.4
FRAT1-202ENST00000490980 SHROOM2Q13796 1616 aa23.78■■□□□ 1.4
FRAT1-202ENST00000490980 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
FRAT1-202ENST00000490980 ARAP1Q96P48 1450 aa23.7■■□□□ 1.38
FRAT1-202ENST00000490980 RAPGEF2Q9Y4G8 1499 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms