RNA–Protein interactions for RNA: ENST00000490887.1

WIPF1-217, Transcript of WAS/WASL interacting protein family member 1, humanhuman

TSL 4

Gene WIPF1, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPF1-217ENST00000490887 NISCHQ9Y2I1 1504 aa26.66■■□□□ 1.86
WIPF1-217ENST00000490887 ABCC9O60706 1549 aa25.25■■□□□ 1.63
WIPF1-217ENST00000490887 DNAJC5BQ9UF47 199 aa24.52■■□□□ 1.52
WIPF1-217ENST00000490887 CCDC180Q9P1Z9 1646 aa24.4■■□□□ 1.5
WIPF1-217ENST00000490887 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
WIPF1-217ENST00000490887 PABPN1Q86U42 306 aaKnown RBP eCLIP23.29■■□□□ 1.32
WIPF1-217ENST00000490887 NACADO15069 1562 aa23.23■■□□□ 1.31
WIPF1-217ENST00000490887 UNC13AQ9UPW8 1703 aa23.21■■□□□ 1.31
WIPF1-217ENST00000490887 DNAJC5Q9H3Z4 198 aa23.16■■□□□ 1.3
WIPF1-217ENST00000490887 BICRAQ9NZM4 1560 aa23.05■■□□□ 1.28
WIPF1-217ENST00000490887 CECR2Q9BXF3 1484 aa22.84■■□□□ 1.25
WIPF1-217ENST00000490887 CC2D2AQ9P2K1 1620 aa22.81■■□□□ 1.24
WIPF1-217ENST00000490887 DCAF8L2P0C7V8 631 aa22.72■■□□□ 1.23
WIPF1-217ENST00000490887 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
WIPF1-217ENST00000490887 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
WIPF1-217ENST00000490887 EIF4G1Q04637 1599 aaKnown RBP22.53■■□□□ 1.2
WIPF1-217ENST00000490887 CUX2O14529 1486 aa22.16■■□□□ 1.14
WIPF1-217ENST00000490887 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
WIPF1-217ENST00000490887 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
WIPF1-217ENST00000490887 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
WIPF1-217ENST00000490887 ERCC6Q03468 1493 aa21.83■■□□□ 1.08
WIPF1-217ENST00000490887 TRIM41Q8WV44 630 aa21.72■■□□□ 1.07
WIPF1-217ENST00000490887 THOC2Q8NI27 1593 aaKnown RBP21.5■■□□□ 1.03
WIPF1-217ENST00000490887 NCAPD3P42695 1498 aa21.45■■□□□ 1.03
WIPF1-217ENST00000490887 NESP48681 1621 aa21.44■■□□□ 1.02
WIPF1-217ENST00000490887 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
WIPF1-217ENST00000490887 HMGXB3Q12766 1538 aa21.25■□□□□ 0.99
WIPF1-217ENST00000490887 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
WIPF1-217ENST00000490887 KIF21AQ7Z4S6 1674 aa21.19■□□□□ 0.98
WIPF1-217ENST00000490887 LAMC3Q9Y6N6 1575 aa21.14■□□□□ 0.98
WIPF1-217ENST00000490887 BAZ1AQ9NRL2 1556 aaPredicted RBP21.09■□□□□ 0.97
WIPF1-217ENST00000490887 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
WIPF1-217ENST00000490887 BAZ1BQ9UIG0 1483 aaKnown RBP20.99■□□□□ 0.95
WIPF1-217ENST00000490887 PDS5BQ9NTI5 1447 aa20.97■□□□□ 0.95
WIPF1-217ENST00000490887 WDR62O43379 1518 aa20.94■□□□□ 0.94
WIPF1-217ENST00000490887 MRC2Q9UBG0 1479 aa20.92■□□□□ 0.94
WIPF1-217ENST00000490887 RIMBP3CA6NJZ7 1639 aa20.87■□□□□ 0.93
WIPF1-217ENST00000490887 RIMBP3BA6NNM3 1639 aa20.87■□□□□ 0.93
WIPF1-217ENST00000490887 RIMBP3Q9UFD9 1639 aa20.87■□□□□ 0.93
WIPF1-217ENST00000490887 OSCARQ8IYS5 282 aa20.87■□□□□ 0.93
WIPF1-217ENST00000490887 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
WIPF1-217ENST00000490887 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
WIPF1-217ENST00000490887 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
WIPF1-217ENST00000490887 CEP164Q9UPV0 1460 aa20.63■□□□□ 0.89
WIPF1-217ENST00000490887 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
WIPF1-217ENST00000490887 MROH2BQ7Z745 1585 aa20.55■□□□□ 0.88
WIPF1-217ENST00000490887 FANCD2Q9BXW9 1451 aa20.52■□□□□ 0.88
WIPF1-217ENST00000490887 TRHP20396 242 aaPredicted RBP20.51■□□□□ 0.87
WIPF1-217ENST00000490887 URB2Q14146 1524 aaKnown RBP20.45■□□□□ 0.86
WIPF1-217ENST00000490887 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
WIPF1-217ENST00000490887 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
WIPF1-217ENST00000490887 ZNF608Q9ULD9 1512 aaPredicted RBP20.34■□□□□ 0.85
WIPF1-217ENST00000490887 CFTRP13569 1480 aa20.32■□□□□ 0.84
WIPF1-217ENST00000490887 WIZO95785 1651 aa20.27■□□□□ 0.84
WIPF1-217ENST00000490887 CHD1O14646 1710 aa20.26■□□□□ 0.83
WIPF1-217ENST00000490887 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
WIPF1-217ENST00000490887 EIF4G3O43432 1585 aaKnown RBP20.22■□□□□ 0.83
WIPF1-217ENST00000490887 RSF1Q96T23 1441 aaPredicted RBP20.21■□□□□ 0.83
WIPF1-217ENST00000490887 PRDM2Q13029 1718 aa20.14■□□□□ 0.81
WIPF1-217ENST00000490887 TOPBP1Q92547 1522 aa20.04■□□□□ 0.8
WIPF1-217ENST00000490887 CLASP1Q7Z460 1538 aa20■□□□□ 0.79
WIPF1-217ENST00000490887 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.79
WIPF1-217ENST00000490887 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
WIPF1-217ENST00000490887 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
WIPF1-217ENST00000490887 ILDR1Q86SU0 546 aaPredicted RBP19.95■□□□□ 0.78
WIPF1-217ENST00000490887 TOP2AP11388 1531 aaKnown RBP19.94■□□□□ 0.78
WIPF1-217ENST00000490887 FBLN2P98095 1184 aa19.94■□□□□ 0.78
WIPF1-217ENST00000490887 DNMBPQ6XZF7 1577 aa19.9■□□□□ 0.78
WIPF1-217ENST00000490887 ABCC8Q09428 1581 aa19.87■□□□□ 0.77
WIPF1-217ENST00000490887 SYNJ1O43426 1573 aa19.84■□□□□ 0.77
WIPF1-217ENST00000490887 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
WIPF1-217ENST00000490887 SNAPC4Q5SXM2 1469 aa19.79■□□□□ 0.76
WIPF1-217ENST00000490887 POLA1P09884 1462 aaPredicted RBP19.78■□□□□ 0.76
WIPF1-217ENST00000490887 RAD54L2Q9Y4B4 1467 aa19.71■□□□□ 0.75
WIPF1-217ENST00000490887 KIF13AQ9H1H9 1805 aa19.71■□□□□ 0.75
WIPF1-217ENST00000490887 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
WIPF1-217ENST00000490887 TDRD9Q8NDG6 1382 aaKnown RBP19.69■□□□□ 0.74
WIPF1-217ENST00000490887 CCDC88BA6NC98 1476 aa19.68■□□□□ 0.74
WIPF1-217ENST00000490887 MAGI1Q96QZ7 1491 aaPredicted RBP19.68■□□□□ 0.74
WIPF1-217ENST00000490887 CHMP7Q8WUX9 453 aaPredicted RBP19.65■□□□□ 0.74
WIPF1-217ENST00000490887 SYNJ2O15056 1496 aa19.63■□□□□ 0.73
WIPF1-217ENST00000490887 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
WIPF1-217ENST00000490887 SOGA1O94964 1423 aa19.59■□□□□ 0.73
WIPF1-217ENST00000490887 KDM4FA0A1W2PPD8 638 aa19.59■□□□□ 0.73
WIPF1-217ENST00000490887 GRIN2BQ13224 1484 aa19.57■□□□□ 0.72
WIPF1-217ENST00000490887 PBRM1Q86U86 1689 aa19.52■□□□□ 0.72
WIPF1-217ENST00000490887 FGD5Q6ZNL6 1462 aa19.52■□□□□ 0.72
WIPF1-217ENST00000490887 CEP170Q5SW79 1584 aa19.46■□□□□ 0.71
WIPF1-217ENST00000490887 KDM6BO15054 1643 aa19.42■□□□□ 0.7
WIPF1-217ENST00000490887 SHROOM2Q13796 1616 aa19.41■□□□□ 0.7
WIPF1-217ENST00000490887 ABCC10Q5T3U5 1492 aa19.39■□□□□ 0.69
WIPF1-217ENST00000490887 CUX1P39880 1505 aa19.37■□□□□ 0.69
WIPF1-217ENST00000490887 DIP2BQ9P265 1576 aa19.36■□□□□ 0.69
WIPF1-217ENST00000490887 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
WIPF1-217ENST00000490887 GRIN2AQ12879 1464 aa19.35■□□□□ 0.69
WIPF1-217ENST00000490887 NUP160Q12769 1436 aa19.34■□□□□ 0.69
WIPF1-217ENST00000490887 HECW2Q9P2P5 1572 aa19.33■□□□□ 0.69
WIPF1-217ENST00000490887 FAM69CQ0P6D2 419 aa19.31■□□□□ 0.68
WIPF1-217ENST00000490887 MAPKBP1O60336 1514 aa19.3■□□□□ 0.68
WIPF1-217ENST00000490887 ADAMTS12P58397 1594 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms