RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 NISCHQ9Y2I1 1504 aa27.86■■■□□ 2.05
CDCP1-203ENST00000490471 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
CDCP1-203ENST00000490471 CHIC1Q5VXU3 224 aa25.96■■□□□ 1.75
CDCP1-203ENST00000490471 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
CDCP1-203ENST00000490471 ABCC9O60706 1549 aa24.83■■□□□ 1.57
CDCP1-203ENST00000490471 RB1CC1Q8TDY2 1594 aa23.81■■□□□ 1.4
CDCP1-203ENST00000490471 NACADO15069 1562 aa23.66■■□□□ 1.38
CDCP1-203ENST00000490471 DCAF8L2P0C7V8 631 aa23.62■■□□□ 1.37
CDCP1-203ENST00000490471 MYO15BQ96JP2 1530 aa23.36■■□□□ 1.33
CDCP1-203ENST00000490471 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
CDCP1-203ENST00000490471 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.29
CDCP1-203ENST00000490471 DNAJC5BQ9UF47 199 aa23.08■■□□□ 1.29
CDCP1-203ENST00000490471 UNC13AQ9UPW8 1703 aa23.08■■□□□ 1.28
CDCP1-203ENST00000490471 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.28
CDCP1-203ENST00000490471 ZCCHC6Q5VYS8 1495 aaKnown RBP23.07■■□□□ 1.28
CDCP1-203ENST00000490471 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
CDCP1-203ENST00000490471 BICRAQ9NZM4 1560 aa22.89■■□□□ 1.26
CDCP1-203ENST00000490471 SHROOM4Q9ULL8 1493 aa22.84■■□□□ 1.25
CDCP1-203ENST00000490471 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
CDCP1-203ENST00000490471 CC2D2AQ9P2K1 1620 aa22.44■■□□□ 1.18
CDCP1-203ENST00000490471 EIF4G1Q04637 1599 aaKnown RBP22.42■■□□□ 1.18
CDCP1-203ENST00000490471 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
CDCP1-203ENST00000490471 NCAPD3P42695 1498 aa21.79■■□□□ 1.08
CDCP1-203ENST00000490471 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
CDCP1-203ENST00000490471 ATAD2BQ9ULI0 1458 aa21.7■■□□□ 1.06
CDCP1-203ENST00000490471 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
CDCP1-203ENST00000490471 BAZ1AQ9NRL2 1556 aaPredicted RBP21.69■■□□□ 1.06
CDCP1-203ENST00000490471 HMGXB3Q12766 1538 aa21.64■■□□□ 1.05
CDCP1-203ENST00000490471 FOXD1Q16676 465 aa21.59■■□□□ 1.05
CDCP1-203ENST00000490471 ERCC6Q03468 1493 aa21.57■■□□□ 1.04
CDCP1-203ENST00000490471 BAZ1BQ9UIG0 1483 aaKnown RBP21.56■■□□□ 1.04
CDCP1-203ENST00000490471 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
CDCP1-203ENST00000490471 CUX2O14529 1486 aa21.47■■□□□ 1.03
CDCP1-203ENST00000490471 MROH2BQ7Z745 1585 aa21.39■■□□□ 1.01
CDCP1-203ENST00000490471 LAMC3Q9Y6N6 1575 aa21.32■■□□□ 1
CDCP1-203ENST00000490471 DNAJC5Q9H3Z4 198 aa21.32■■□□□ 1
CDCP1-203ENST00000490471 NESP48681 1621 aa21.29■■□□□ 1
CDCP1-203ENST00000490471 PDS5BQ9NTI5 1447 aa21.27■■□□□ 1
CDCP1-203ENST00000490471 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
CDCP1-203ENST00000490471 WIZO95785 1651 aa21.15■□□□□ 0.98
CDCP1-203ENST00000490471 THOC2Q8NI27 1593 aaKnown RBP21.07■□□□□ 0.96
CDCP1-203ENST00000490471 KIF21AQ7Z4S6 1674 aa21.06■□□□□ 0.96
CDCP1-203ENST00000490471 RSF1Q96T23 1441 aaPredicted RBP21.03■□□□□ 0.96
CDCP1-203ENST00000490471 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
CDCP1-203ENST00000490471 TOP2AP11388 1531 aaKnown RBP20.96■□□□□ 0.95
CDCP1-203ENST00000490471 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
CDCP1-203ENST00000490471 CFTRP13569 1480 aa20.9■□□□□ 0.94
CDCP1-203ENST00000490471 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.94
CDCP1-203ENST00000490471 WDR62O43379 1518 aa20.88■□□□□ 0.93
CDCP1-203ENST00000490471 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
CDCP1-203ENST00000490471 PRDM2Q13029 1718 aa20.73■□□□□ 0.91
CDCP1-203ENST00000490471 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
CDCP1-203ENST00000490471 ABCC8Q09428 1581 aa20.63■□□□□ 0.89
CDCP1-203ENST00000490471 URB2Q14146 1524 aaKnown RBP20.62■□□□□ 0.89
CDCP1-203ENST00000490471 OSCARQ8IYS5 282 aa20.59■□□□□ 0.89
CDCP1-203ENST00000490471 IFT140Q96RY7 1462 aa20.54■□□□□ 0.88
CDCP1-203ENST00000490471 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
CDCP1-203ENST00000490471 TRIM41Q8WV44 630 aa20.45■□□□□ 0.86
CDCP1-203ENST00000490471 DNMBPQ6XZF7 1577 aa20.44■□□□□ 0.86
CDCP1-203ENST00000490471 ZNF608Q9ULD9 1512 aaPredicted RBP20.33■□□□□ 0.85
CDCP1-203ENST00000490471 SUPT5HO00267 1087 aaKnown RBP20.28■□□□□ 0.84
CDCP1-203ENST00000490471 EIF4G3O43432 1585 aaKnown RBP20.28■□□□□ 0.84
CDCP1-203ENST00000490471 SOGA1O94964 1423 aa20.27■□□□□ 0.83
CDCP1-203ENST00000490471 POLA1P09884 1462 aaPredicted RBP20.26■□□□□ 0.83
CDCP1-203ENST00000490471 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
CDCP1-203ENST00000490471 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
CDCP1-203ENST00000490471 MSH5O43196 834 aa20.23■□□□□ 0.83
CDCP1-203ENST00000490471 FBLN2P98095 1184 aa20.23■□□□□ 0.83
CDCP1-203ENST00000490471 AQRO60306 1485 aaKnown RBP eCLIP20.22■□□□□ 0.83
CDCP1-203ENST00000490471 WDR97A6NE52 1622 aa20.21■□□□□ 0.83
CDCP1-203ENST00000490471 PIAS4Q8N2W9 510 aaPredicted RBP20.19■□□□□ 0.82
CDCP1-203ENST00000490471 ADRA2BP18089 450 aa20.18■□□□□ 0.82
CDCP1-203ENST00000490471 FGD5Q6ZNL6 1462 aa20.16■□□□□ 0.82
CDCP1-203ENST00000490471 RAD54L2Q9Y4B4 1467 aa20.15■□□□□ 0.82
CDCP1-203ENST00000490471 TDRD9Q8NDG6 1382 aaKnown RBP20.14■□□□□ 0.81
CDCP1-203ENST00000490471 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
CDCP1-203ENST00000490471 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
CDCP1-203ENST00000490471 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
CDCP1-203ENST00000490471 CHMP7Q8WUX9 453 aaPredicted RBP20.12■□□□□ 0.81
CDCP1-203ENST00000490471 CHD1O14646 1710 aa20.11■□□□□ 0.81
CDCP1-203ENST00000490471 CUX1P39880 1505 aa20.1■□□□□ 0.81
CDCP1-203ENST00000490471 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
CDCP1-203ENST00000490471 GRIN2BQ13224 1484 aa20.08■□□□□ 0.81
CDCP1-203ENST00000490471 MAGI1Q96QZ7 1491 aaPredicted RBP20.07■□□□□ 0.8
CDCP1-203ENST00000490471 SNAPC4Q5SXM2 1469 aa20.04■□□□□ 0.8
CDCP1-203ENST00000490471 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
CDCP1-203ENST00000490471 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
CDCP1-203ENST00000490471 GAPVD1Q14C86 1478 aa20■□□□□ 0.79
CDCP1-203ENST00000490471 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
CDCP1-203ENST00000490471 SYNJ2O15056 1496 aa19.98■□□□□ 0.79
CDCP1-203ENST00000490471 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
CDCP1-203ENST00000490471 PBRM1Q86U86 1689 aa19.93■□□□□ 0.78
CDCP1-203ENST00000490471 TOP2BQ02880 1626 aa19.88■□□□□ 0.77
CDCP1-203ENST00000490471 ABCA5Q8WWZ7 1642 aa19.87■□□□□ 0.77
CDCP1-203ENST00000490471 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
CDCP1-203ENST00000490471 CLASP1Q7Z460 1538 aa19.86■□□□□ 0.77
CDCP1-203ENST00000490471 TRHP20396 242 aaPredicted RBP19.86■□□□□ 0.77
CDCP1-203ENST00000490471 ARAP1Q96P48 1450 aa19.85■□□□□ 0.77
CDCP1-203ENST00000490471 FHAD1B1AJZ9 1412 aa19.77■□□□□ 0.76
CDCP1-203ENST00000490471 GRIN2AQ12879 1464 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms