RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 NISCHQ9Y2I1 1504 aa27.93■■■□□ 2.06
DUBR-204ENST00000490441 CCDC180Q9P1Z9 1646 aa25.04■■□□□ 1.6
DUBR-204ENST00000490441 ABCC9O60706 1549 aa24.96■■□□□ 1.59
DUBR-204ENST00000490441 AEBP2Q6ZN18 517 aaPredicted RBP24.51■■□□□ 1.51
DUBR-204ENST00000490441 CHIC1Q5VXU3 224 aa24.47■■□□□ 1.51
DUBR-204ENST00000490441 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
DUBR-204ENST00000490441 NACADO15069 1562 aa23.66■■□□□ 1.38
DUBR-204ENST00000490441 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
DUBR-204ENST00000490441 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
DUBR-204ENST00000490441 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
DUBR-204ENST00000490441 PABPN1Q86U42 306 aaKnown RBP eCLIP23.26■■□□□ 1.31
DUBR-204ENST00000490441 UNC13AQ9UPW8 1703 aa23.21■■□□□ 1.31
DUBR-204ENST00000490441 ZCCHC6Q5VYS8 1495 aaKnown RBP23.17■■□□□ 1.3
DUBR-204ENST00000490441 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.28
DUBR-204ENST00000490441 BICRAQ9NZM4 1560 aa23.05■■□□□ 1.28
DUBR-204ENST00000490441 SCRIBQ14160 1630 aa22.83■■□□□ 1.25
DUBR-204ENST00000490441 SHROOM4Q9ULL8 1493 aa22.82■■□□□ 1.24
DUBR-204ENST00000490441 CC2D2AQ9P2K1 1620 aa22.54■■□□□ 1.2
DUBR-204ENST00000490441 EIF4G1Q04637 1599 aaKnown RBP22.52■■□□□ 1.2
DUBR-204ENST00000490441 CECR2Q9BXF3 1484 aa22.49■■□□□ 1.19
DUBR-204ENST00000490441 NCAPD3P42695 1498 aa21.83■■□□□ 1.08
DUBR-204ENST00000490441 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.08
DUBR-204ENST00000490441 SMARCA4P51532 1647 aa21.77■■□□□ 1.08
DUBR-204ENST00000490441 SMARCA2P51531 1590 aa21.75■■□□□ 1.07
DUBR-204ENST00000490441 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
DUBR-204ENST00000490441 HMGXB3Q12766 1538 aa21.69■■□□□ 1.06
DUBR-204ENST00000490441 ERCC6Q03468 1493 aa21.6■■□□□ 1.05
DUBR-204ENST00000490441 BAZ1BQ9UIG0 1483 aaKnown RBP21.6■■□□□ 1.05
DUBR-204ENST00000490441 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.05
DUBR-204ENST00000490441 PEG3Q9GZU2 1588 aa21.54■■□□□ 1.04
DUBR-204ENST00000490441 MROH2BQ7Z745 1585 aa21.51■■□□□ 1.03
DUBR-204ENST00000490441 CUX2O14529 1486 aa21.51■■□□□ 1.03
DUBR-204ENST00000490441 NESP48681 1621 aa21.44■■□□□ 1.02
DUBR-204ENST00000490441 DNAJC5Q9H3Z4 198 aa21.37■■□□□ 1.01
DUBR-204ENST00000490441 LAMC3Q9Y6N6 1575 aa21.34■■□□□ 1.01
DUBR-204ENST00000490441 WIZO95785 1651 aa21.25■□□□□ 0.99
DUBR-204ENST00000490441 PDS5BQ9NTI5 1447 aa21.24■□□□□ 0.99
DUBR-204ENST00000490441 THOC2Q8NI27 1593 aaKnown RBP21.21■□□□□ 0.99
DUBR-204ENST00000490441 CADPSQ9ULU8 1353 aa21.19■□□□□ 0.98
DUBR-204ENST00000490441 KIF21AQ7Z4S6 1674 aa21.17■□□□□ 0.98
DUBR-204ENST00000490441 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
DUBR-204ENST00000490441 MRC2Q9UBG0 1479 aa21.04■□□□□ 0.96
DUBR-204ENST00000490441 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
DUBR-204ENST00000490441 CEP164Q9UPV0 1460 aa20.98■□□□□ 0.95
DUBR-204ENST00000490441 WDR62O43379 1518 aa20.96■□□□□ 0.95
DUBR-204ENST00000490441 FANCD2Q9BXW9 1451 aa20.95■□□□□ 0.94
DUBR-204ENST00000490441 CFTRP13569 1480 aa20.94■□□□□ 0.94
DUBR-204ENST00000490441 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
DUBR-204ENST00000490441 URB2Q14146 1524 aaKnown RBP20.74■□□□□ 0.91
DUBR-204ENST00000490441 PRDM2Q13029 1718 aa20.74■□□□□ 0.91
DUBR-204ENST00000490441 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
DUBR-204ENST00000490441 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
DUBR-204ENST00000490441 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
DUBR-204ENST00000490441 OSCARQ8IYS5 282 aa20.55■□□□□ 0.88
DUBR-204ENST00000490441 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
DUBR-204ENST00000490441 TRIM41Q8WV44 630 aa20.52■□□□□ 0.88
DUBR-204ENST00000490441 DNMBPQ6XZF7 1577 aa20.5■□□□□ 0.87
DUBR-204ENST00000490441 ZNF608Q9ULD9 1512 aaPredicted RBP20.48■□□□□ 0.87
DUBR-204ENST00000490441 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
DUBR-204ENST00000490441 POLA1P09884 1462 aaPredicted RBP20.35■□□□□ 0.85
DUBR-204ENST00000490441 TARBP1Q13395 1621 aaKnown RBP20.34■□□□□ 0.85
DUBR-204ENST00000490441 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84
DUBR-204ENST00000490441 SUPT5HO00267 1087 aaKnown RBP20.29■□□□□ 0.84
DUBR-204ENST00000490441 SOGA1O94964 1423 aa20.27■□□□□ 0.84
DUBR-204ENST00000490441 RAD54L2Q9Y4B4 1467 aa20.26■□□□□ 0.83
DUBR-204ENST00000490441 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
DUBR-204ENST00000490441 FBLN2P98095 1184 aa20.23■□□□□ 0.83
DUBR-204ENST00000490441 RIMBP3CA6NJZ7 1639 aa20.23■□□□□ 0.83
DUBR-204ENST00000490441 RIMBP3BA6NNM3 1639 aa20.23■□□□□ 0.83
DUBR-204ENST00000490441 RIMBP3Q9UFD9 1639 aa20.23■□□□□ 0.83
DUBR-204ENST00000490441 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
DUBR-204ENST00000490441 CUX1P39880 1505 aa20.21■□□□□ 0.83
DUBR-204ENST00000490441 CHD1O14646 1710 aa20.2■□□□□ 0.82
DUBR-204ENST00000490441 ARHGEF11O15085 1522 aa20.18■□□□□ 0.82
DUBR-204ENST00000490441 WDR97A6NE52 1622 aa20.18■□□□□ 0.82
DUBR-204ENST00000490441 SNAPC4Q5SXM2 1469 aa20.13■□□□□ 0.81
DUBR-204ENST00000490441 PLPPR3Q6T4P5 718 aa20.1■□□□□ 0.81
DUBR-204ENST00000490441 GRIN2BQ13224 1484 aa20.1■□□□□ 0.81
DUBR-204ENST00000490441 CHMP7Q8WUX9 453 aaPredicted RBP20.09■□□□□ 0.81
DUBR-204ENST00000490441 MAGI1Q96QZ7 1491 aaPredicted RBP20.09■□□□□ 0.81
DUBR-204ENST00000490441 CYB5RLQ6IPT4 315 aa20.06■□□□□ 0.8
DUBR-204ENST00000490441 GAPVD1Q14C86 1478 aa20.03■□□□□ 0.8
DUBR-204ENST00000490441 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.79
DUBR-204ENST00000490441 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
DUBR-204ENST00000490441 SYNJ2O15056 1496 aa20.01■□□□□ 0.79
DUBR-204ENST00000490441 PBRM1Q86U86 1689 aa19.99■□□□□ 0.79
DUBR-204ENST00000490441 ARAP1Q96P48 1450 aa19.99■□□□□ 0.79
DUBR-204ENST00000490441 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
DUBR-204ENST00000490441 CLASP1Q7Z460 1538 aa19.97■□□□□ 0.79
DUBR-204ENST00000490441 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
DUBR-204ENST00000490441 TOP2BQ02880 1626 aa19.92■□□□□ 0.78
DUBR-204ENST00000490441 BIVM-ERCC5R4GMW8 1640 aa19.91■□□□□ 0.78
DUBR-204ENST00000490441 TRHP20396 242 aaPredicted RBP19.84■□□□□ 0.77
DUBR-204ENST00000490441 GRIN2AQ12879 1464 aa19.82■□□□□ 0.76
DUBR-204ENST00000490441 ADAMTS12P58397 1594 aa19.82■□□□□ 0.76
DUBR-204ENST00000490441 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
DUBR-204ENST00000490441 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
DUBR-204ENST00000490441 NUP160Q12769 1436 aa19.75■□□□□ 0.75
DUBR-204ENST00000490441 CEP170Q5SW79 1584 aa19.73■□□□□ 0.75
DUBR-204ENST00000490441 ERCC6L2Q5T890 1561 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms