RNA–Protein interactions for RNA: ENST00000490351.1

LSAMP-AS1-201, LSAMP antisense RNA 1, humanhuman

TSL 2 BASIC

Gene LSAMP-AS1, Length 553 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-AS1-201ENST00000490351 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.88
LSAMP-AS1-201ENST00000490351 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
LSAMP-AS1-201ENST00000490351 NISCHQ9Y2I1 1504 aa19.44■□□□□ 0.7
LSAMP-AS1-201ENST00000490351 ABCC9O60706 1549 aa17.79■□□□□ 0.44
LSAMP-AS1-201ENST00000490351 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
LSAMP-AS1-201ENST00000490351 PHF23Q9BUL5 403 aaPredicted RBP17.49■□□□□ 0.39
LSAMP-AS1-201ENST00000490351 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
LSAMP-AS1-201ENST00000490351 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
LSAMP-AS1-201ENST00000490351 RB1CC1Q8TDY2 1594 aa16.79■□□□□ 0.28
LSAMP-AS1-201ENST00000490351 NACADO15069 1562 aa16.63■□□□□ 0.25
LSAMP-AS1-201ENST00000490351 PABPN1Q86U42 306 aaKnown RBP eCLIP16.56■□□□□ 0.24
LSAMP-AS1-201ENST00000490351 DCAF8L2P0C7V8 631 aa16.52■□□□□ 0.24
LSAMP-AS1-201ENST00000490351 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
LSAMP-AS1-201ENST00000490351 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
LSAMP-AS1-201ENST00000490351 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
LSAMP-AS1-201ENST00000490351 FOXD1Q16676 465 aa16.22■□□□□ 0.19
LSAMP-AS1-201ENST00000490351 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
LSAMP-AS1-201ENST00000490351 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
LSAMP-AS1-201ENST00000490351 ZCCHC6Q5VYS8 1495 aaKnown RBP16.07■□□□□ 0.16
LSAMP-AS1-201ENST00000490351 CECR2Q9BXF3 1484 aa16.06■□□□□ 0.16
LSAMP-AS1-201ENST00000490351 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
LSAMP-AS1-201ENST00000490351 CC2D2AQ9P2K1 1620 aa16.02■□□□□ 0.16
LSAMP-AS1-201ENST00000490351 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
LSAMP-AS1-201ENST00000490351 SCRIBQ14160 1630 aa15.94■□□□□ 0.14
LSAMP-AS1-201ENST00000490351 DNAJC5Q9H3Z4 198 aa15.75■□□□□ 0.11
LSAMP-AS1-201ENST00000490351 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
LSAMP-AS1-201ENST00000490351 CUX2O14529 1486 aa15.44■□□□□ 0.06
LSAMP-AS1-201ENST00000490351 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
LSAMP-AS1-201ENST00000490351 ADRA2BP18089 450 aa15.4■□□□□ 0.06
LSAMP-AS1-201ENST00000490351 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
LSAMP-AS1-201ENST00000490351 ATAD2BQ9ULI0 1458 aa15.32■□□□□ 0.04
LSAMP-AS1-201ENST00000490351 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
LSAMP-AS1-201ENST00000490351 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
LSAMP-AS1-201ENST00000490351 NESP48681 1621 aa15.22■□□□□ 0.03
LSAMP-AS1-201ENST00000490351 SMARCA2P51531 1590 aa15.22■□□□□ 0.03
LSAMP-AS1-201ENST00000490351 SMARCA4P51532 1647 aa15.18■□□□□ 0.02
LSAMP-AS1-201ENST00000490351 BAZ1BQ9UIG0 1483 aaKnown RBP15.13■□□□□ 0.01
LSAMP-AS1-201ENST00000490351 MSH5O43196 834 aa15.1■□□□□ 0.01
LSAMP-AS1-201ENST00000490351 THOC2Q8NI27 1593 aaKnown RBP15.08■□□□□ 0
LSAMP-AS1-201ENST00000490351 BAZ1AQ9NRL2 1556 aaPredicted RBP15.08■□□□□ 0
LSAMP-AS1-201ENST00000490351 PEG3Q9GZU2 1588 aa15.06■□□□□ 0
LSAMP-AS1-201ENST00000490351 LAMC3Q9Y6N6 1575 aa15.03■□□□□ -0
LSAMP-AS1-201ENST00000490351 PDS5BQ9NTI5 1447 aa15□□□□□ -0.01
LSAMP-AS1-201ENST00000490351 MROH2BQ7Z745 1585 aa14.98□□□□□ -0.01
LSAMP-AS1-201ENST00000490351 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
LSAMP-AS1-201ENST00000490351 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
LSAMP-AS1-201ENST00000490351 KIF21AQ7Z4S6 1674 aa14.92□□□□□ -0.02
LSAMP-AS1-201ENST00000490351 MRC2Q9UBG0 1479 aa14.88□□□□□ -0.03
LSAMP-AS1-201ENST00000490351 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
LSAMP-AS1-201ENST00000490351 WDR62O43379 1518 aa14.84□□□□□ -0.03
LSAMP-AS1-201ENST00000490351 CEP164Q9UPV0 1460 aa14.76□□□□□ -0.05
LSAMP-AS1-201ENST00000490351 WIZO95785 1651 aa14.74□□□□□ -0.05
LSAMP-AS1-201ENST00000490351 FANCD2Q9BXW9 1451 aa14.73□□□□□ -0.05
LSAMP-AS1-201ENST00000490351 OSCARQ8IYS5 282 aa14.71□□□□□ -0.05
LSAMP-AS1-201ENST00000490351 CFTRP13569 1480 aa14.69□□□□□ -0.06
LSAMP-AS1-201ENST00000490351 URB2Q14146 1524 aaKnown RBP14.63□□□□□ -0.07
LSAMP-AS1-201ENST00000490351 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
LSAMP-AS1-201ENST00000490351 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
LSAMP-AS1-201ENST00000490351 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
LSAMP-AS1-201ENST00000490351 IFT140Q96RY7 1462 aa14.49□□□□□ -0.09
LSAMP-AS1-201ENST00000490351 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
LSAMP-AS1-201ENST00000490351 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
LSAMP-AS1-201ENST00000490351 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
LSAMP-AS1-201ENST00000490351 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
LSAMP-AS1-201ENST00000490351 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
LSAMP-AS1-201ENST00000490351 TOPBP1Q92547 1522 aa14.42□□□□□ -0.1
LSAMP-AS1-201ENST00000490351 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
LSAMP-AS1-201ENST00000490351 PRDM2Q13029 1718 aa14.35□□□□□ -0.11
LSAMP-AS1-201ENST00000490351 EIF4G3O43432 1585 aaKnown RBP14.35□□□□□ -0.11
LSAMP-AS1-201ENST00000490351 ABCC8Q09428 1581 aa14.35□□□□□ -0.11
LSAMP-AS1-201ENST00000490351 AQRO60306 1485 aaKnown RBP eCLIP14.34□□□□□ -0.11
LSAMP-AS1-201ENST00000490351 DNMBPQ6XZF7 1577 aa14.32□□□□□ -0.12
LSAMP-AS1-201ENST00000490351 ARAP1Q96P48 1450 aa14.31□□□□□ -0.12
LSAMP-AS1-201ENST00000490351 TARBP1Q13395 1621 aaKnown RBP14.29□□□□□ -0.12
LSAMP-AS1-201ENST00000490351 TRHP20396 242 aaPredicted RBP14.28□□□□□ -0.12
LSAMP-AS1-201ENST00000490351 FBLN2P98095 1184 aa14.28□□□□□ -0.12
LSAMP-AS1-201ENST00000490351 POLA1P09884 1462 aaPredicted RBP14.27□□□□□ -0.12
LSAMP-AS1-201ENST00000490351 CHD1O14646 1710 aa14.24□□□□□ -0.13
LSAMP-AS1-201ENST00000490351 RAD54L2Q9Y4B4 1467 aa14.23□□□□□ -0.13
LSAMP-AS1-201ENST00000490351 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
LSAMP-AS1-201ENST00000490351 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.13
LSAMP-AS1-201ENST00000490351 SOGA1O94964 1423 aa14.21□□□□□ -0.13
LSAMP-AS1-201ENST00000490351 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
LSAMP-AS1-201ENST00000490351 CLASP1Q7Z460 1538 aa14.16□□□□□ -0.14
LSAMP-AS1-201ENST00000490351 PPP4R3CPQ6ZMV5 832 aa14.16□□□□□ -0.14
LSAMP-AS1-201ENST00000490351 CHMP7Q8WUX9 453 aaPredicted RBP14.15□□□□□ -0.14
LSAMP-AS1-201ENST00000490351 FGD5Q6ZNL6 1462 aa14.13□□□□□ -0.15
LSAMP-AS1-201ENST00000490351 MAGI1Q96QZ7 1491 aaPredicted RBP14.12□□□□□ -0.15
LSAMP-AS1-201ENST00000490351 WDR97A6NE52 1622 aa14.11□□□□□ -0.15
LSAMP-AS1-201ENST00000490351 GRIN2BQ13224 1484 aa14.1□□□□□ -0.15
LSAMP-AS1-201ENST00000490351 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
LSAMP-AS1-201ENST00000490351 CUX1P39880 1505 aa14.09□□□□□ -0.15
LSAMP-AS1-201ENST00000490351 SYNJ2O15056 1496 aa14.08□□□□□ -0.16
LSAMP-AS1-201ENST00000490351 GAPVD1Q14C86 1478 aa14.04□□□□□ -0.16
LSAMP-AS1-201ENST00000490351 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
LSAMP-AS1-201ENST00000490351 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
LSAMP-AS1-201ENST00000490351 DMRT2Q9Y5R5 561 aa13.97□□□□□ -0.17
LSAMP-AS1-201ENST00000490351 ABCA5Q8WWZ7 1642 aa13.93□□□□□ -0.18
LSAMP-AS1-201ENST00000490351 ERCC6L2Q5T890 1561 aa13.92□□□□□ -0.18
LSAMP-AS1-201ENST00000490351 PBRM1Q86U86 1689 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms