RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 NISCHQ9Y2I1 1504 aa31.64■■■□□ 2.66
TRAIP-210ENST00000489948 CCDC180Q9P1Z9 1646 aa27.99■■■□□ 2.07
TRAIP-210ENST00000489948 ABCC9O60706 1549 aa26.59■■□□□ 1.85
TRAIP-210ENST00000489948 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
TRAIP-210ENST00000489948 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
TRAIP-210ENST00000489948 MYO15BQ96JP2 1530 aa26.22■■□□□ 1.79
TRAIP-210ENST00000489948 NACADO15069 1562 aa26.11■■□□□ 1.77
TRAIP-210ENST00000489948 RB1CC1Q8TDY2 1594 aa25.97■■□□□ 1.75
TRAIP-210ENST00000489948 DCAF8L2P0C7V8 631 aa25.86■■□□□ 1.73
TRAIP-210ENST00000489948 SCRIBQ14160 1630 aa25.44■■□□□ 1.66
TRAIP-210ENST00000489948 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
TRAIP-210ENST00000489948 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
TRAIP-210ENST00000489948 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
TRAIP-210ENST00000489948 PABPN1Q86U42 306 aaKnown RBP eCLIP24.84■■□□□ 1.57
TRAIP-210ENST00000489948 DNAJC5BQ9UF47 199 aa24.61■■□□□ 1.53
TRAIP-210ENST00000489948 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
TRAIP-210ENST00000489948 CECR2Q9BXF3 1484 aa24.5■■□□□ 1.51
TRAIP-210ENST00000489948 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
TRAIP-210ENST00000489948 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
TRAIP-210ENST00000489948 MROH2BQ7Z745 1585 aa24.35■■□□□ 1.49
TRAIP-210ENST00000489948 PEG3Q9GZU2 1588 aa24.28■■□□□ 1.48
TRAIP-210ENST00000489948 RSF1Q96T23 1441 aaPredicted RBP24.27■■□□□ 1.48
TRAIP-210ENST00000489948 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
TRAIP-210ENST00000489948 SMARCA2P51531 1590 aa24.17■■□□□ 1.46
TRAIP-210ENST00000489948 WIZO95785 1651 aa24.13■■□□□ 1.45
TRAIP-210ENST00000489948 ATAD2BQ9ULI0 1458 aa24.13■■□□□ 1.45
TRAIP-210ENST00000489948 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
TRAIP-210ENST00000489948 NCAPD3P42695 1498 aa24.04■■□□□ 1.44
TRAIP-210ENST00000489948 TOP2AP11388 1531 aaKnown RBP23.97■■□□□ 1.43
TRAIP-210ENST00000489948 BAZ1BQ9UIG0 1483 aaKnown RBP23.95■■□□□ 1.42
TRAIP-210ENST00000489948 SUPT5HO00267 1087 aaKnown RBP23.89■■□□□ 1.41
TRAIP-210ENST00000489948 DNAJC5Q9H3Z4 198 aa23.75■■□□□ 1.39
TRAIP-210ENST00000489948 CCDC88BA6NC98 1476 aa23.59■■□□□ 1.37
TRAIP-210ENST00000489948 PRDM2Q13029 1718 aa23.36■■□□□ 1.33
TRAIP-210ENST00000489948 CFTRP13569 1480 aa23.36■■□□□ 1.33
TRAIP-210ENST00000489948 LAMC3Q9Y6N6 1575 aa23.35■■□□□ 1.33
TRAIP-210ENST00000489948 CADPSQ9ULU8 1353 aa23.32■■□□□ 1.32
TRAIP-210ENST00000489948 NESP48681 1621 aa23.2■■□□□ 1.3
TRAIP-210ENST00000489948 PDS5BQ9NTI5 1447 aa23.1■■□□□ 1.29
TRAIP-210ENST00000489948 FANCD2Q9BXW9 1451 aa23.07■■□□□ 1.28
TRAIP-210ENST00000489948 KIF21AQ7Z4S6 1674 aa23.04■■□□□ 1.28
TRAIP-210ENST00000489948 CEP164Q9UPV0 1460 aa23.01■■□□□ 1.27
TRAIP-210ENST00000489948 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
TRAIP-210ENST00000489948 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
TRAIP-210ENST00000489948 WRNQ14191 1432 aaPredicted RBP eCLIP22.88■■□□□ 1.25
TRAIP-210ENST00000489948 THOC2Q8NI27 1593 aaKnown RBP22.87■■□□□ 1.25
TRAIP-210ENST00000489948 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
TRAIP-210ENST00000489948 MRC2Q9UBG0 1479 aa22.85■■□□□ 1.25
TRAIP-210ENST00000489948 DNMBPQ6XZF7 1577 aa22.85■■□□□ 1.25
TRAIP-210ENST00000489948 TOP2BQ02880 1626 aa22.84■■□□□ 1.25
TRAIP-210ENST00000489948 CUX1P39880 1505 aa22.83■■□□□ 1.25
TRAIP-210ENST00000489948 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
TRAIP-210ENST00000489948 WDR62O43379 1518 aa22.82■■□□□ 1.24
TRAIP-210ENST00000489948 URB2Q14146 1524 aaKnown RBP22.81■■□□□ 1.24
TRAIP-210ENST00000489948 TOPBP1Q92547 1522 aa22.78■■□□□ 1.24
TRAIP-210ENST00000489948 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
TRAIP-210ENST00000489948 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.21
TRAIP-210ENST00000489948 POLA1P09884 1462 aaPredicted RBP22.63■■□□□ 1.21
TRAIP-210ENST00000489948 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
TRAIP-210ENST00000489948 WDR97A6NE52 1622 aa22.56■■□□□ 1.2
TRAIP-210ENST00000489948 CUX2O14529 1486 aa22.54■■□□□ 1.2
TRAIP-210ENST00000489948 TARBP1Q13395 1621 aaKnown RBP22.53■■□□□ 1.2
TRAIP-210ENST00000489948 IFT140Q96RY7 1462 aa22.5■■□□□ 1.19
TRAIP-210ENST00000489948 ABCA10Q8WWZ4 1543 aa22.5■■□□□ 1.19
TRAIP-210ENST00000489948 SOGA1O94964 1423 aa22.48■■□□□ 1.19
TRAIP-210ENST00000489948 RAD54L2Q9Y4B4 1467 aa22.45■■□□□ 1.18
TRAIP-210ENST00000489948 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
TRAIP-210ENST00000489948 EEA1Q15075 1411 aa22.38■■□□□ 1.17
TRAIP-210ENST00000489948 KIF27Q86VH2 1401 aa22.35■■□□□ 1.17
TRAIP-210ENST00000489948 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.17
TRAIP-210ENST00000489948 ZNF608Q9ULD9 1512 aaPredicted RBP22.29■■□□□ 1.16
TRAIP-210ENST00000489948 PBRM1Q86U86 1689 aa22.28■■□□□ 1.16
TRAIP-210ENST00000489948 GAPVD1Q14C86 1478 aa22.27■■□□□ 1.16
TRAIP-210ENST00000489948 ERICH3Q5RHP9 1530 aa22.26■■□□□ 1.15
TRAIP-210ENST00000489948 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
TRAIP-210ENST00000489948 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
TRAIP-210ENST00000489948 GRIN2BQ13224 1484 aa22.21■■□□□ 1.15
TRAIP-210ENST00000489948 CUL7Q14999 1698 aa22.2■■□□□ 1.15
TRAIP-210ENST00000489948 AQRO60306 1485 aaKnown RBP eCLIP22.2■■□□□ 1.146e-9■■■■■ 45.1
TRAIP-210ENST00000489948 IGF1RP08069 1367 aa22.14■■□□□ 1.14
TRAIP-210ENST00000489948 ADAMTS12P58397 1594 aa22.14■■□□□ 1.13
TRAIP-210ENST00000489948 KIF21BO75037 1637 aa22.13■■□□□ 1.13
TRAIP-210ENST00000489948 MAGI1Q96QZ7 1491 aaPredicted RBP22.13■■□□□ 1.13
TRAIP-210ENST00000489948 PRXQ9BXM0 1461 aa22.11■■□□□ 1.13
TRAIP-210ENST00000489948 CSRNP3Q8WYN3 585 aa22.09■■□□□ 1.13
TRAIP-210ENST00000489948 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
TRAIP-210ENST00000489948 FHAD1B1AJZ9 1412 aa22.05■■□□□ 1.12
TRAIP-210ENST00000489948 FAM9AQ8IZU1 332 aaPredicted RBP22.02■■□□□ 1.12
TRAIP-210ENST00000489948 CARMIL1Q5VZK9 1371 aa22.01■■□□□ 1.11
TRAIP-210ENST00000489948 SYNJ2O15056 1496 aa22.01■■□□□ 1.11
TRAIP-210ENST00000489948 RAPGEF2Q9Y4G8 1499 aa22.01■■□□□ 1.11
TRAIP-210ENST00000489948 GOLGA3Q08378 1498 aa21.98■■□□□ 1.11
TRAIP-210ENST00000489948 GRIN2AQ12879 1464 aa21.94■■□□□ 1.1
TRAIP-210ENST00000489948 CHD1O14646 1710 aa21.92■■□□□ 1.1
TRAIP-210ENST00000489948 CTTNBP2Q8WZ74 1663 aa21.87■■□□□ 1.09
TRAIP-210ENST00000489948 NUP160Q12769 1436 aa21.83■■□□□ 1.09
TRAIP-210ENST00000489948 CEP170Q5SW79 1584 aa21.82■■□□□ 1.08
TRAIP-210ENST00000489948 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
TRAIP-210ENST00000489948 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.08
TRAIP-210ENST00000489948 KIAA0586Q9BVV6 1533 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms