RNA–Protein interactions for RNA: ENST00000489775.5

PLSCR1-216, Transcript of phospholipid scramblase 1, humanhuman

TSL 5

Gene PLSCR1, Length 984 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-216ENST00000489775 NISCHQ9Y2I1 1504 aa34.49■■■■□ 3.11
PLSCR1-216ENST00000489775 CCDC180Q9P1Z9 1646 aa30.98■■■□□ 2.55
PLSCR1-216ENST00000489775 ABCC9O60706 1549 aa30.83■■■□□ 2.53
PLSCR1-216ENST00000489775 RB1CC1Q8TDY2 1594 aa29.4■■■□□ 2.3
PLSCR1-216ENST00000489775 NACADO15069 1562 aa29.22■■■□□ 2.27
PLSCR1-216ENST00000489775 DCAF8L2P0C7V8 631 aa28.92■■■□□ 2.22
PLSCR1-216ENST00000489775 DNAJC5BQ9UF47 199 aa28.89■■■□□ 2.22
PLSCR1-216ENST00000489775 MYO15BQ96JP2 1530 aa28.87■■■□□ 2.21
PLSCR1-216ENST00000489775 UNC13AQ9UPW8 1703 aa28.86■■■□□ 2.21
PLSCR1-216ENST00000489775 PABPN1Q86U42 306 aaKnown RBP eCLIP28.66■■■□□ 2.18
PLSCR1-216ENST00000489775 BICRAQ9NZM4 1560 aa28.61■■■□□ 2.17
PLSCR1-216ENST00000489775 ZCCHC6Q5VYS8 1495 aaKnown RBP28.6■■■□□ 2.17
PLSCR1-216ENST00000489775 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
PLSCR1-216ENST00000489775 SHROOM4Q9ULL8 1493 aa28.18■■■□□ 2.1
PLSCR1-216ENST00000489775 SCRIBQ14160 1630 aa28.17■■■□□ 2.1
PLSCR1-216ENST00000489775 CC2D2AQ9P2K1 1620 aa27.9■■■□□ 2.06
PLSCR1-216ENST00000489775 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
PLSCR1-216ENST00000489775 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.04
PLSCR1-216ENST00000489775 NCAPD3P42695 1498 aa26.97■■□□□ 1.91
PLSCR1-216ENST00000489775 SMARCA4P51532 1647 aa26.9■■□□□ 1.9
PLSCR1-216ENST00000489775 ATAD2BQ9ULI0 1458 aa26.89■■□□□ 1.9
PLSCR1-216ENST00000489775 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
PLSCR1-216ENST00000489775 HMGXB3Q12766 1538 aa26.8■■□□□ 1.88
PLSCR1-216ENST00000489775 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
PLSCR1-216ENST00000489775 PEG3Q9GZU2 1588 aa26.67■■□□□ 1.86
PLSCR1-216ENST00000489775 BAZ1BQ9UIG0 1483 aaKnown RBP26.61■■□□□ 1.85
PLSCR1-216ENST00000489775 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
PLSCR1-216ENST00000489775 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
PLSCR1-216ENST00000489775 CUX2O14529 1486 aa26.56■■□□□ 1.84
PLSCR1-216ENST00000489775 NESP48681 1621 aa26.53■■□□□ 1.84
PLSCR1-216ENST00000489775 DNAJC5Q9H3Z4 198 aa26.46■■□□□ 1.83
PLSCR1-216ENST00000489775 LAMC3Q9Y6N6 1575 aa26.37■■□□□ 1.81
PLSCR1-216ENST00000489775 THOC2Q8NI27 1593 aaKnown RBP26.3■■□□□ 1.8
PLSCR1-216ENST00000489775 WIZO95785 1651 aa26.28■■□□□ 1.8
PLSCR1-216ENST00000489775 KIF21AQ7Z4S6 1674 aa26.25■■□□□ 1.79
PLSCR1-216ENST00000489775 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
PLSCR1-216ENST00000489775 CADPSQ9ULU8 1353 aa26.12■■□□□ 1.77
PLSCR1-216ENST00000489775 RSF1Q96T23 1441 aaPredicted RBP26.02■■□□□ 1.76
PLSCR1-216ENST00000489775 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
PLSCR1-216ENST00000489775 WDR62O43379 1518 aa25.93■■□□□ 1.74
PLSCR1-216ENST00000489775 TOP2AP11388 1531 aaKnown RBP25.93■■□□□ 1.74
PLSCR1-216ENST00000489775 CFTRP13569 1480 aa25.86■■□□□ 1.73
PLSCR1-216ENST00000489775 CEP164Q9UPV0 1460 aa25.85■■□□□ 1.73
PLSCR1-216ENST00000489775 FANCD2Q9BXW9 1451 aa25.83■■□□□ 1.73
PLSCR1-216ENST00000489775 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
PLSCR1-216ENST00000489775 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
PLSCR1-216ENST00000489775 CCDC88BA6NC98 1476 aa25.62■■□□□ 1.69
PLSCR1-216ENST00000489775 TOPBP1Q92547 1522 aa25.37■■□□□ 1.65
PLSCR1-216ENST00000489775 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
PLSCR1-216ENST00000489775 ZNF608Q9ULD9 1512 aaPredicted RBP25.31■■□□□ 1.64
PLSCR1-216ENST00000489775 OSCARQ8IYS5 282 aa25.3■■□□□ 1.64
PLSCR1-216ENST00000489775 ABCC8Q09428 1581 aa25.3■■□□□ 1.64
PLSCR1-216ENST00000489775 DNMBPQ6XZF7 1577 aa25.3■■□□□ 1.64
PLSCR1-216ENST00000489775 TRIM41Q8WV44 630 aa25.25■■□□□ 1.63
PLSCR1-216ENST00000489775 AEBP2Q6ZN18 517 aaPredicted RBP25.22■■□□□ 1.63
PLSCR1-216ENST00000489775 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.62
PLSCR1-216ENST00000489775 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
PLSCR1-216ENST00000489775 POLA1P09884 1462 aaPredicted RBP25.11■■□□□ 1.61
PLSCR1-216ENST00000489775 RIMBP3CA6NJZ7 1639 aa25.07■■□□□ 1.6
PLSCR1-216ENST00000489775 RIMBP3BA6NNM3 1639 aa25.07■■□□□ 1.6
PLSCR1-216ENST00000489775 RIMBP3Q9UFD9 1639 aa25.07■■□□□ 1.6
PLSCR1-216ENST00000489775 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.63e-7■■■□□ 16
PLSCR1-216ENST00000489775 CHD1O14646 1710 aa25.03■■□□□ 1.6
PLSCR1-216ENST00000489775 RAD54L2Q9Y4B4 1467 aa25.01■■□□□ 1.59
PLSCR1-216ENST00000489775 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
PLSCR1-216ENST00000489775 CUX1P39880 1505 aa24.96■■□□□ 1.59
PLSCR1-216ENST00000489775 FGD5Q6ZNL6 1462 aa24.96■■□□□ 1.59
PLSCR1-216ENST00000489775 SOGA1O94964 1423 aa24.95■■□□□ 1.59
PLSCR1-216ENST00000489775 WDR97A6NE52 1622 aa24.92■■□□□ 1.58
PLSCR1-216ENST00000489775 TDRD9Q8NDG6 1382 aaKnown RBP24.9■■□□□ 1.58
PLSCR1-216ENST00000489775 SNAPC4Q5SXM2 1469 aa24.82■■□□□ 1.56
PLSCR1-216ENST00000489775 SUPT5HO00267 1087 aaKnown RBP24.8■■□□□ 1.56
PLSCR1-216ENST00000489775 FBLN2P98095 1184 aa24.8■■□□□ 1.56
PLSCR1-216ENST00000489775 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
PLSCR1-216ENST00000489775 GRIN2BQ13224 1484 aa24.75■■□□□ 1.55
PLSCR1-216ENST00000489775 PBRM1Q86U86 1689 aa24.74■■□□□ 1.55
PLSCR1-216ENST00000489775 CLASP1Q7Z460 1538 aa24.73■■□□□ 1.55
PLSCR1-216ENST00000489775 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
PLSCR1-216ENST00000489775 CYB5RLQ6IPT4 315 aa24.69■■□□□ 1.54
PLSCR1-216ENST00000489775 ABCA10Q8WWZ4 1543 aa24.69■■□□□ 1.54
PLSCR1-216ENST00000489775 ABCA5Q8WWZ7 1642 aa24.68■■□□□ 1.54
PLSCR1-216ENST00000489775 SYNJ1O43426 1573 aa24.67■■□□□ 1.54
PLSCR1-216ENST00000489775 SYNJ2O15056 1496 aa24.67■■□□□ 1.54
PLSCR1-216ENST00000489775 GAPVD1Q14C86 1478 aa24.67■■□□□ 1.54
PLSCR1-216ENST00000489775 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
PLSCR1-216ENST00000489775 CHMP7Q8WUX9 453 aaPredicted RBP24.65■■□□□ 1.54
PLSCR1-216ENST00000489775 BIVM-ERCC5R4GMW8 1640 aa24.62■■□□□ 1.53
PLSCR1-216ENST00000489775 TOP2BQ02880 1626 aa24.59■■□□□ 1.53
PLSCR1-216ENST00000489775 WRNQ14191 1432 aaPredicted RBP eCLIP24.54■■□□□ 1.52
PLSCR1-216ENST00000489775 ADAMTS12P58397 1594 aa24.48■■□□□ 1.51
PLSCR1-216ENST00000489775 GRIN2AQ12879 1464 aa24.45■■□□□ 1.5
PLSCR1-216ENST00000489775 CEP170Q5SW79 1584 aa24.39■■□□□ 1.5
PLSCR1-216ENST00000489775 NUP160Q12769 1436 aa24.38■■□□□ 1.49
PLSCR1-216ENST00000489775 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
PLSCR1-216ENST00000489775 FHAD1B1AJZ9 1412 aa24.36■■□□□ 1.49
PLSCR1-216ENST00000489775 TRHP20396 242 aaPredicted RBP24.36■■□□□ 1.49
PLSCR1-216ENST00000489775 ERCC6L2Q5T890 1561 aa24.34■■□□□ 1.49
PLSCR1-216ENST00000489775 SHROOM2Q13796 1616 aa24.32■■□□□ 1.48
PLSCR1-216ENST00000489775 RUSC2Q8N2Y8 1516 aa24.14■■□□□ 1.45
PLSCR1-216ENST00000489775 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms