RNA–Protein interactions for RNA: ENST00000489570.1

MVB12B-205, Transcript of multivesicular body subunit 12B, humanhuman

TSL 3

Gene MVB12B, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12B-205ENST00000489570 NISCHQ9Y2I1 1504 aa10.77□□□□□ -0.69
MVB12B-205ENST00000489570 CCDC180Q9P1Z9 1646 aa9.73□□□□□ -0.85
MVB12B-205ENST00000489570 CHIC1Q5VXU3 224 aa9.65□□□□□ -0.86
MVB12B-205ENST00000489570 ABCC9O60706 1549 aa9.65□□□□□ -0.86
MVB12B-205ENST00000489570 AEBP2Q6ZN18 517 aaPredicted RBP9.42□□□□□ -0.9
MVB12B-205ENST00000489570 RB1CC1Q8TDY2 1594 aa9.26□□□□□ -0.93
MVB12B-205ENST00000489570 NACADO15069 1562 aa9.19□□□□□ -0.94
MVB12B-205ENST00000489570 MYO15BQ96JP2 1530 aa9.09□□□□□ -0.95
MVB12B-205ENST00000489570 DCAF8L2P0C7V8 631 aa9.03□□□□□ -0.96
MVB12B-205ENST00000489570 UNC13AQ9UPW8 1703 aa8.97□□□□□ -0.97
MVB12B-205ENST00000489570 DNAJC5BQ9UF47 199 aa8.97□□□□□ -0.97
MVB12B-205ENST00000489570 ZCCHC6Q5VYS8 1495 aaKnown RBP8.96□□□□□ -0.98
MVB12B-205ENST00000489570 DCAF1Q9Y4B6 1507 aa8.95□□□□□ -0.98
MVB12B-205ENST00000489570 PABPN1Q86U42 306 aaKnown RBP eCLIP8.94□□□□□ -0.98
MVB12B-205ENST00000489570 SHROOM4Q9ULL8 1493 aa8.94□□□□□ -0.98
MVB12B-205ENST00000489570 BICRAQ9NZM4 1560 aa8.91□□□□□ -0.98
MVB12B-205ENST00000489570 SCRIBQ14160 1630 aa8.8□□□□□ -1
MVB12B-205ENST00000489570 CC2D2AQ9P2K1 1620 aa8.74□□□□□ -1.01
MVB12B-205ENST00000489570 EIF4G1Q04637 1599 aaKnown RBP8.73□□□□□ -1.01
MVB12B-205ENST00000489570 CECR2Q9BXF3 1484 aa8.73□□□□□ -1.01
MVB12B-205ENST00000489570 PHF23Q9BUL5 403 aaPredicted RBP8.6□□□□□ -1.03
MVB12B-205ENST00000489570 NCAPD3P42695 1498 aa8.45□□□□□ -1.06
MVB12B-205ENST00000489570 SMARCA2P51531 1590 aa8.44□□□□□ -1.06
MVB12B-205ENST00000489570 HMGXB3Q12766 1538 aa8.42□□□□□ -1.06
MVB12B-205ENST00000489570 SMARCA4P51532 1647 aa8.41□□□□□ -1.06
MVB12B-205ENST00000489570 ATAD2BQ9ULI0 1458 aa8.41□□□□□ -1.06
MVB12B-205ENST00000489570 BAZ1AQ9NRL2 1556 aaPredicted RBP8.4□□□□□ -1.06
MVB12B-205ENST00000489570 CUX2O14529 1486 aa8.39□□□□□ -1.07
MVB12B-205ENST00000489570 ERCC6Q03468 1493 aa8.38□□□□□ -1.07
MVB12B-205ENST00000489570 BAZ1BQ9UIG0 1483 aaKnown RBP8.36□□□□□ -1.07
MVB12B-205ENST00000489570 PEG3Q9GZU2 1588 aa8.35□□□□□ -1.07
MVB12B-205ENST00000489570 DNAJC5Q9H3Z4 198 aa8.32□□□□□ -1.08
MVB12B-205ENST00000489570 LAMC3Q9Y6N6 1575 aa8.3□□□□□ -1.08
MVB12B-205ENST00000489570 SUPT5HO00267 1087 aaKnown RBP8.29□□□□□ -1.08
MVB12B-205ENST00000489570 MROH2BQ7Z745 1585 aa8.27□□□□□ -1.09
MVB12B-205ENST00000489570 NESP48681 1621 aa8.26□□□□□ -1.09
MVB12B-205ENST00000489570 THOC2Q8NI27 1593 aaKnown RBP8.24□□□□□ -1.09
MVB12B-205ENST00000489570 RSF1Q96T23 1441 aaPredicted RBP8.24□□□□□ -1.09
MVB12B-205ENST00000489570 PDS5BQ9NTI5 1447 aa8.24□□□□□ -1.09
MVB12B-205ENST00000489570 KIF21AQ7Z4S6 1674 aa8.19□□□□□ -1.1
MVB12B-205ENST00000489570 CADPSQ9ULU8 1353 aa8.19□□□□□ -1.1
MVB12B-205ENST00000489570 WIZO95785 1651 aa8.16□□□□□ -1.1
MVB12B-205ENST00000489570 MRC2Q9UBG0 1479 aa8.16□□□□□ -1.1
MVB12B-205ENST00000489570 WDR62O43379 1518 aa8.14□□□□□ -1.11
MVB12B-205ENST00000489570 CEP164Q9UPV0 1460 aa8.13□□□□□ -1.11
MVB12B-205ENST00000489570 TOP2AP11388 1531 aaKnown RBP8.12□□□□□ -1.11
MVB12B-205ENST00000489570 CFTRP13569 1480 aa8.1□□□□□ -1.11
MVB12B-205ENST00000489570 FANCD2Q9BXW9 1451 aa8.1□□□□□ -1.11
MVB12B-205ENST00000489570 PRDM2Q13029 1718 aa8.04□□□□□ -1.12
MVB12B-205ENST00000489570 PLPPR3Q6T4P5 718 aa8.03□□□□□ -1.12
MVB12B-205ENST00000489570 URB2Q14146 1524 aaKnown RBP8.01□□□□□ -1.13
MVB12B-205ENST00000489570 ABCC8Q09428 1581 aa7.98□□□□□ -1.13
MVB12B-205ENST00000489570 CCDC88BA6NC98 1476 aa7.98□□□□□ -1.13
MVB12B-205ENST00000489570 IFT140Q96RY7 1462 aa7.98□□□□□ -1.13
MVB12B-205ENST00000489570 OSCARQ8IYS5 282 aa7.97□□□□□ -1.13
MVB12B-205ENST00000489570 TRIM41Q8WV44 630 aa7.94□□□□□ -1.14
MVB12B-205ENST00000489570 TOPBP1Q92547 1522 aa7.93□□□□□ -1.14
MVB12B-205ENST00000489570 DNMBPQ6XZF7 1577 aa7.93□□□□□ -1.14
MVB12B-205ENST00000489570 EIF4G3O43432 1585 aaKnown RBP7.9□□□□□ -1.14
MVB12B-205ENST00000489570 ZNF608Q9ULD9 1512 aaPredicted RBP7.89□□□□□ -1.15
MVB12B-205ENST00000489570 EHMT2Q96KQ7 1210 aa7.88□□□□□ -1.15
MVB12B-205ENST00000489570 WDR97A6NE52 1622 aa7.88□□□□□ -1.15
MVB12B-205ENST00000489570 RIMBP3CA6NJZ7 1639 aa7.86□□□□□ -1.15
MVB12B-205ENST00000489570 RIMBP3BA6NNM3 1639 aa7.86□□□□□ -1.15
MVB12B-205ENST00000489570 TARBP1Q13395 1621 aaKnown RBP7.86□□□□□ -1.15
MVB12B-205ENST00000489570 RIMBP3Q9UFD9 1639 aa7.86□□□□□ -1.15
MVB12B-205ENST00000489570 POLA1P09884 1462 aaPredicted RBP7.86□□□□□ -1.15
MVB12B-205ENST00000489570 ARHGEF11O15085 1522 aa7.84□□□□□ -1.15
MVB12B-205ENST00000489570 AQRO60306 1485 aaKnown RBP eCLIP7.82□□□□□ -1.16
MVB12B-205ENST00000489570 CHD1O14646 1710 aa7.82□□□□□ -1.16
MVB12B-205ENST00000489570 SOGA1O94964 1423 aa7.81□□□□□ -1.16
MVB12B-205ENST00000489570 FGD5Q6ZNL6 1462 aa7.81□□□□□ -1.16
MVB12B-205ENST00000489570 MAGI1Q96QZ7 1491 aaPredicted RBP7.8□□□□□ -1.16
MVB12B-205ENST00000489570 SENP3Q9H4L4 574 aaPredicted RBP7.79□□□□□ -1.16
MVB12B-205ENST00000489570 RAD54L2Q9Y4B4 1467 aa7.79□□□□□ -1.16
MVB12B-205ENST00000489570 WRNQ14191 1432 aaPredicted RBP eCLIP7.78□□□□□ -1.16
MVB12B-205ENST00000489570 CUX1P39880 1505 aa7.78□□□□□ -1.16
MVB12B-205ENST00000489570 FBLN2P98095 1184 aa7.78□□□□□ -1.16
MVB12B-205ENST00000489570 GRIN2BQ13224 1484 aa7.78□□□□□ -1.16
MVB12B-205ENST00000489570 SNAPC4Q5SXM2 1469 aa7.78□□□□□ -1.16
MVB12B-205ENST00000489570 SYNJ1O43426 1573 aa7.78□□□□□ -1.16
MVB12B-205ENST00000489570 TDRD9Q8NDG6 1382 aaKnown RBP7.77□□□□□ -1.17
MVB12B-205ENST00000489570 EEA1Q15075 1411 aa7.77□□□□□ -1.17
MVB12B-205ENST00000489570 SYNJ2O15056 1496 aa7.75□□□□□ -1.17
MVB12B-205ENST00000489570 CLASP1Q7Z460 1538 aa7.75□□□□□ -1.17
MVB12B-205ENST00000489570 CHMP7Q8WUX9 453 aaPredicted RBP7.75□□□□□ -1.17
MVB12B-205ENST00000489570 ARAP1Q96P48 1450 aa7.75□□□□□ -1.17
MVB12B-205ENST00000489570 CYB5RLQ6IPT4 315 aa7.74□□□□□ -1.17
MVB12B-205ENST00000489570 GAPVD1Q14C86 1478 aa7.74□□□□□ -1.17
MVB12B-205ENST00000489570 PBRM1Q86U86 1689 aa7.73□□□□□ -1.17
MVB12B-205ENST00000489570 ABCA10Q8WWZ4 1543 aa7.73□□□□□ -1.17
MVB12B-205ENST00000489570 TOP2BQ02880 1626 aa7.73□□□□□ -1.17
MVB12B-205ENST00000489570 ABCA5Q8WWZ7 1642 aa7.73□□□□□ -1.17
MVB12B-205ENST00000489570 BIVM-ERCC5R4GMW8 1640 aa7.73□□□□□ -1.17
MVB12B-205ENST00000489570 KCNA4P22459 653 aa7.7□□□□□ -1.18
MVB12B-205ENST00000489570 TRHP20396 242 aaPredicted RBP7.68□□□□□ -1.18
MVB12B-205ENST00000489570 ADAMTS12P58397 1594 aa7.67□□□□□ -1.18
MVB12B-205ENST00000489570 GRIN2AQ12879 1464 aa7.67□□□□□ -1.18
MVB12B-205ENST00000489570 ERICH3Q5RHP9 1530 aa7.66□□□□□ -1.18
MVB12B-205ENST00000489570 FHAD1B1AJZ9 1412 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 244.3 ms