RNA–Protein interactions for RNA: ENST00000489295.5

LRRFIP1-213, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 5

Gene LRRFIP1, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-213ENST00000489295 NISCHQ9Y2I1 1504 aa25.53■■□□□ 1.68
LRRFIP1-213ENST00000489295 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
LRRFIP1-213ENST00000489295 AEBP2Q6ZN18 517 aaPredicted RBP21.98■■□□□ 1.11
LRRFIP1-213ENST00000489295 ABCC9O60706 1549 aa21.51■■□□□ 1.03
LRRFIP1-213ENST00000489295 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.02
LRRFIP1-213ENST00000489295 CHIC1Q5VXU3 224 aa21.34■■□□□ 1.01
LRRFIP1-213ENST00000489295 DCAF1Q9Y4B6 1507 aa21.22■□□□□ 0.99
LRRFIP1-213ENST00000489295 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
LRRFIP1-213ENST00000489295 NACADO15069 1562 aa21.08■□□□□ 0.97
LRRFIP1-213ENST00000489295 RB1CC1Q8TDY2 1594 aa20.98■□□□□ 0.95
LRRFIP1-213ENST00000489295 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
LRRFIP1-213ENST00000489295 SCRIBQ14160 1630 aa20.53■□□□□ 0.88
LRRFIP1-213ENST00000489295 UNC13AQ9UPW8 1703 aa20.45■□□□□ 0.86
LRRFIP1-213ENST00000489295 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
LRRFIP1-213ENST00000489295 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
LRRFIP1-213ENST00000489295 PABPN1Q86U42 306 aaKnown RBP eCLIP20.1■□□□□ 0.81
LRRFIP1-213ENST00000489295 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
LRRFIP1-213ENST00000489295 CECR2Q9BXF3 1484 aa19.77■□□□□ 0.76
LRRFIP1-213ENST00000489295 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
LRRFIP1-213ENST00000489295 SMARCA4P51532 1647 aa19.72■□□□□ 0.75
LRRFIP1-213ENST00000489295 MROH2BQ7Z745 1585 aa19.64■□□□□ 0.73
LRRFIP1-213ENST00000489295 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
LRRFIP1-213ENST00000489295 PEG3Q9GZU2 1588 aa19.57■□□□□ 0.72
LRRFIP1-213ENST00000489295 SMARCA2P51531 1590 aa19.53■□□□□ 0.72
LRRFIP1-213ENST00000489295 CC2D2AQ9P2K1 1620 aa19.51■□□□□ 0.71
LRRFIP1-213ENST00000489295 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
LRRFIP1-213ENST00000489295 WIZO95785 1651 aa19.43■□□□□ 0.7
LRRFIP1-213ENST00000489295 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
LRRFIP1-213ENST00000489295 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
LRRFIP1-213ENST00000489295 BAZ1BQ9UIG0 1483 aaKnown RBP19.35■□□□□ 0.69
LRRFIP1-213ENST00000489295 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
LRRFIP1-213ENST00000489295 SUPT5HO00267 1087 aaKnown RBP19.31■□□□□ 0.68
LRRFIP1-213ENST00000489295 DNAJC5BQ9UF47 199 aa19.24■□□□□ 0.67
LRRFIP1-213ENST00000489295 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
LRRFIP1-213ENST00000489295 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
LRRFIP1-213ENST00000489295 CFTRP13569 1480 aa18.85■□□□□ 0.61
LRRFIP1-213ENST00000489295 CADPSQ9ULU8 1353 aa18.84■□□□□ 0.61
LRRFIP1-213ENST00000489295 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
LRRFIP1-213ENST00000489295 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
LRRFIP1-213ENST00000489295 NESP48681 1621 aa18.73■□□□□ 0.59
LRRFIP1-213ENST00000489295 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
LRRFIP1-213ENST00000489295 FANCD2Q9BXW9 1451 aa18.64■□□□□ 0.57
LRRFIP1-213ENST00000489295 CEP164Q9UPV0 1460 aa18.59■□□□□ 0.57
LRRFIP1-213ENST00000489295 KIF21AQ7Z4S6 1674 aa18.57■□□□□ 0.56
LRRFIP1-213ENST00000489295 ERCC6Q03468 1493 aa18.54■□□□□ 0.56
LRRFIP1-213ENST00000489295 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
LRRFIP1-213ENST00000489295 MRC2Q9UBG0 1479 aa18.48■□□□□ 0.55
LRRFIP1-213ENST00000489295 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
LRRFIP1-213ENST00000489295 ABCC8Q09428 1581 aa18.47■□□□□ 0.55
LRRFIP1-213ENST00000489295 DNMBPQ6XZF7 1577 aa18.45■□□□□ 0.54
LRRFIP1-213ENST00000489295 THOC2Q8NI27 1593 aaKnown RBP18.44■□□□□ 0.54
LRRFIP1-213ENST00000489295 WDR62O43379 1518 aa18.42■□□□□ 0.54
LRRFIP1-213ENST00000489295 CUX1P39880 1505 aa18.42■□□□□ 0.54
LRRFIP1-213ENST00000489295 URB2Q14146 1524 aaKnown RBP18.42■□□□□ 0.54
LRRFIP1-213ENST00000489295 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
LRRFIP1-213ENST00000489295 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
LRRFIP1-213ENST00000489295 TOPBP1Q92547 1522 aa18.4■□□□□ 0.54
LRRFIP1-213ENST00000489295 SYNJ1O43426 1573 aa18.4■□□□□ 0.54
LRRFIP1-213ENST00000489295 FGD5Q6ZNL6 1462 aa18.28■□□□□ 0.52
LRRFIP1-213ENST00000489295 POLA1P09884 1462 aaPredicted RBP18.27■□□□□ 0.52
LRRFIP1-213ENST00000489295 TRIM41Q8WV44 630 aa18.26■□□□□ 0.51
LRRFIP1-213ENST00000489295 CUX2O14529 1486 aa18.24■□□□□ 0.51
LRRFIP1-213ENST00000489295 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
LRRFIP1-213ENST00000489295 SOGA1O94964 1423 aa18.17■□□□□ 0.5
LRRFIP1-213ENST00000489295 TARBP1Q13395 1621 aaKnown RBP18.17■□□□□ 0.5
LRRFIP1-213ENST00000489295 ABCA10Q8WWZ4 1543 aa18.17■□□□□ 0.5
LRRFIP1-213ENST00000489295 WDR97A6NE52 1622 aa18.16■□□□□ 0.5
LRRFIP1-213ENST00000489295 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
LRRFIP1-213ENST00000489295 EEA1Q15075 1411 aa18.06■□□□□ 0.48
LRRFIP1-213ENST00000489295 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
LRRFIP1-213ENST00000489295 ABCA5Q8WWZ7 1642 aa18.06■□□□□ 0.48
LRRFIP1-213ENST00000489295 EIF4G3O43432 1585 aaKnown RBP18.02■□□□□ 0.48
LRRFIP1-213ENST00000489295 ZNF608Q9ULD9 1512 aaPredicted RBP18.01■□□□□ 0.47
LRRFIP1-213ENST00000489295 GAPVD1Q14C86 1478 aa17.99■□□□□ 0.47
LRRFIP1-213ENST00000489295 TDRD9Q8NDG6 1382 aaKnown RBP17.97■□□□□ 0.47
LRRFIP1-213ENST00000489295 ERICH3Q5RHP9 1530 aa17.97■□□□□ 0.47
LRRFIP1-213ENST00000489295 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
LRRFIP1-213ENST00000489295 PBRM1Q86U86 1689 aa17.95■□□□□ 0.46
LRRFIP1-213ENST00000489295 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.46
LRRFIP1-213ENST00000489295 RUSC2Q8N2Y8 1516 aa17.94■□□□□ 0.46
LRRFIP1-213ENST00000489295 CUL7Q14999 1698 aa17.9■□□□□ 0.46
LRRFIP1-213ENST00000489295 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
LRRFIP1-213ENST00000489295 IGF1RP08069 1367 aa17.88■□□□□ 0.45
LRRFIP1-213ENST00000489295 ADAMTS12P58397 1594 aa17.87■□□□□ 0.45
LRRFIP1-213ENST00000489295 SNAPC4Q5SXM2 1469 aa17.85■□□□□ 0.45
LRRFIP1-213ENST00000489295 CSRNP3Q8WYN3 585 aa17.85■□□□□ 0.45
LRRFIP1-213ENST00000489295 PRXQ9BXM0 1461 aa17.83■□□□□ 0.45
LRRFIP1-213ENST00000489295 KIF21BO75037 1637 aa17.83■□□□□ 0.44
LRRFIP1-213ENST00000489295 FHAD1B1AJZ9 1412 aa17.82■□□□□ 0.44
LRRFIP1-213ENST00000489295 FAM9AQ8IZU1 332 aaPredicted RBP17.8■□□□□ 0.44
LRRFIP1-213ENST00000489295 CARMIL1Q5VZK9 1371 aa17.79■□□□□ 0.44
LRRFIP1-213ENST00000489295 SYNJ2O15056 1496 aa17.79■□□□□ 0.44
LRRFIP1-213ENST00000489295 RAPGEF2Q9Y4G8 1499 aa17.77■□□□□ 0.44
LRRFIP1-213ENST00000489295 GOLGA3Q08378 1498 aa17.74■□□□□ 0.43
LRRFIP1-213ENST00000489295 GRIN2AQ12879 1464 aa17.72■□□□□ 0.43
LRRFIP1-213ENST00000489295 CHD1O14646 1710 aa17.67■□□□□ 0.42
LRRFIP1-213ENST00000489295 CHMP7Q8WUX9 453 aaPredicted RBP17.65■□□□□ 0.42
LRRFIP1-213ENST00000489295 NUP160Q12769 1436 aa17.64■□□□□ 0.41
LRRFIP1-213ENST00000489295 CTTNBP2Q8WZ74 1663 aa17.61■□□□□ 0.41
LRRFIP1-213ENST00000489295 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms