RNA–Protein interactions for RNA: ENST00000489067.1

PRKCE-212, Transcript of protein kinase C epsilon, humanhuman

TSL 3

Gene PRKCE, Length 798 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCE-212ENST00000489067 NISCHQ9Y2I1 1504 aa23.85■■□□□ 1.41
PRKCE-212ENST00000489067 ABCC9O60706 1549 aa21.85■■□□□ 1.09
PRKCE-212ENST00000489067 CCDC180Q9P1Z9 1646 aa21.5■■□□□ 1.03
PRKCE-212ENST00000489067 DNAJC5BQ9UF47 199 aa20.9■□□□□ 0.94
PRKCE-212ENST00000489067 RB1CC1Q8TDY2 1594 aa20.6■□□□□ 0.89
PRKCE-212ENST00000489067 NACADO15069 1562 aa20.41■□□□□ 0.86
PRKCE-212ENST00000489067 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.84
PRKCE-212ENST00000489067 UNC13AQ9UPW8 1703 aa20.19■□□□□ 0.82
PRKCE-212ENST00000489067 DCAF8L2P0C7V8 631 aa20.16■□□□□ 0.82
PRKCE-212ENST00000489067 BICRAQ9NZM4 1560 aa20.14■□□□□ 0.81
PRKCE-212ENST00000489067 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
PRKCE-212ENST00000489067 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
PRKCE-212ENST00000489067 CC2D2AQ9P2K1 1620 aa19.73■□□□□ 0.75
PRKCE-212ENST00000489067 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
PRKCE-212ENST00000489067 CECR2Q9BXF3 1484 aa19.7■□□□□ 0.74
PRKCE-212ENST00000489067 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
PRKCE-212ENST00000489067 EIF4G1Q04637 1599 aaKnown RBP19.6■□□□□ 0.73
PRKCE-212ENST00000489067 SCRIBQ14160 1630 aa19.58■□□□□ 0.72
PRKCE-212ENST00000489067 DNAJC5Q9H3Z4 198 aa19.35■□□□□ 0.69
PRKCE-212ENST00000489067 CUX2O14529 1486 aa18.94■□□□□ 0.62
PRKCE-212ENST00000489067 NCAPD3P42695 1498 aa18.89■□□□□ 0.61
PRKCE-212ENST00000489067 ERCC6Q03468 1493 aa18.8■□□□□ 0.6
PRKCE-212ENST00000489067 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
PRKCE-212ENST00000489067 NESP48681 1621 aa18.71■□□□□ 0.59
PRKCE-212ENST00000489067 HMGXB3Q12766 1538 aa18.69■□□□□ 0.58
PRKCE-212ENST00000489067 SMARCA4P51532 1647 aa18.66■□□□□ 0.58
PRKCE-212ENST00000489067 SMARCA2P51531 1590 aa18.64■□□□□ 0.58
PRKCE-212ENST00000489067 THOC2Q8NI27 1593 aaKnown RBP18.58■□□□□ 0.56
PRKCE-212ENST00000489067 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.56
PRKCE-212ENST00000489067 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
PRKCE-212ENST00000489067 BAZ1AQ9NRL2 1556 aaPredicted RBP18.49■□□□□ 0.55
PRKCE-212ENST00000489067 LAMC3Q9Y6N6 1575 aa18.47■□□□□ 0.55
PRKCE-212ENST00000489067 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
PRKCE-212ENST00000489067 MROH2BQ7Z745 1585 aa18.4■□□□□ 0.54
PRKCE-212ENST00000489067 PDS5BQ9NTI5 1447 aa18.35■□□□□ 0.53
PRKCE-212ENST00000489067 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
PRKCE-212ENST00000489067 CADPSQ9ULU8 1353 aa18.28■□□□□ 0.52
PRKCE-212ENST00000489067 WDR62O43379 1518 aa18.23■□□□□ 0.51
PRKCE-212ENST00000489067 MRC2Q9UBG0 1479 aa18.23■□□□□ 0.51
PRKCE-212ENST00000489067 AEBP2Q6ZN18 517 aaPredicted RBP18.19■□□□□ 0.5
PRKCE-212ENST00000489067 CHIC1Q5VXU3 224 aa18.17■□□□□ 0.5
PRKCE-212ENST00000489067 WIZO95785 1651 aa18.14■□□□□ 0.49
PRKCE-212ENST00000489067 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
PRKCE-212ENST00000489067 FANCD2Q9BXW9 1451 aa18.06■□□□□ 0.48
PRKCE-212ENST00000489067 CFTRP13569 1480 aa18.02■□□□□ 0.48
PRKCE-212ENST00000489067 OSCARQ8IYS5 282 aa18■□□□□ 0.47
PRKCE-212ENST00000489067 URB2Q14146 1524 aaKnown RBP17.98■□□□□ 0.47
PRKCE-212ENST00000489067 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.46
PRKCE-212ENST00000489067 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
PRKCE-212ENST00000489067 RIMBP3CA6NJZ7 1639 aa17.84■□□□□ 0.45
PRKCE-212ENST00000489067 RIMBP3BA6NNM3 1639 aa17.84■□□□□ 0.45
PRKCE-212ENST00000489067 RIMBP3Q9UFD9 1639 aa17.84■□□□□ 0.45
PRKCE-212ENST00000489067 ZNF608Q9ULD9 1512 aaPredicted RBP17.82■□□□□ 0.44
PRKCE-212ENST00000489067 ARHGEF11O15085 1522 aa17.75■□□□□ 0.43
PRKCE-212ENST00000489067 IFT140Q96RY7 1462 aa17.74■□□□□ 0.43
PRKCE-212ENST00000489067 PRDM2Q13029 1718 aa17.72■□□□□ 0.43
PRKCE-212ENST00000489067 CCDC88BA6NC98 1476 aa17.7■□□□□ 0.42
PRKCE-212ENST00000489067 TOPBP1Q92547 1522 aa17.69■□□□□ 0.42
PRKCE-212ENST00000489067 EIF4G3O43432 1585 aaKnown RBP17.65■□□□□ 0.42
PRKCE-212ENST00000489067 CYB5RLQ6IPT4 315 aa17.61■□□□□ 0.41
PRKCE-212ENST00000489067 TARBP1Q13395 1621 aaKnown RBP17.59■□□□□ 0.41
PRKCE-212ENST00000489067 AQRO60306 1485 aaKnown RBP eCLIP17.58■□□□□ 0.41
PRKCE-212ENST00000489067 ARAP1Q96P48 1450 aa17.58■□□□□ 0.41
PRKCE-212ENST00000489067 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
PRKCE-212ENST00000489067 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
PRKCE-212ENST00000489067 CHD1O14646 1710 aa17.56■□□□□ 0.4
PRKCE-212ENST00000489067 POLA1P09884 1462 aaPredicted RBP17.5■□□□□ 0.39
PRKCE-212ENST00000489067 RAD54L2Q9Y4B4 1467 aa17.46■□□□□ 0.39
PRKCE-212ENST00000489067 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
PRKCE-212ENST00000489067 FBLN2P98095 1184 aa17.43■□□□□ 0.38
PRKCE-212ENST00000489067 CLASP1Q7Z460 1538 aa17.42■□□□□ 0.38
PRKCE-212ENST00000489067 TDRD9Q8NDG6 1382 aaKnown RBP17.41■□□□□ 0.38
PRKCE-212ENST00000489067 SOGA1O94964 1423 aa17.38■□□□□ 0.37
PRKCE-212ENST00000489067 SNAPC4Q5SXM2 1469 aa17.37■□□□□ 0.37
PRKCE-212ENST00000489067 FGD5Q6ZNL6 1462 aa17.33■□□□□ 0.37
PRKCE-212ENST00000489067 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
PRKCE-212ENST00000489067 CUX1P39880 1505 aa17.3■□□□□ 0.36
PRKCE-212ENST00000489067 MAGI1Q96QZ7 1491 aaPredicted RBP17.29■□□□□ 0.36
PRKCE-212ENST00000489067 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
PRKCE-212ENST00000489067 CHMP7Q8WUX9 453 aaPredicted RBP17.27■□□□□ 0.36
PRKCE-212ENST00000489067 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
PRKCE-212ENST00000489067 SYNJ2O15056 1496 aa17.25■□□□□ 0.35
PRKCE-212ENST00000489067 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
PRKCE-212ENST00000489067 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
PRKCE-212ENST00000489067 ERCC6L2Q5T890 1561 aa17.15■□□□□ 0.34
PRKCE-212ENST00000489067 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
PRKCE-212ENST00000489067 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
PRKCE-212ENST00000489067 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
PRKCE-212ENST00000489067 NUP160Q12769 1436 aa17.04■□□□□ 0.32
PRKCE-212ENST00000489067 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
PRKCE-212ENST00000489067 SHROOM2Q13796 1616 aa17.01■□□□□ 0.31
PRKCE-212ENST00000489067 ADAMTS12P58397 1594 aa17.01■□□□□ 0.31
PRKCE-212ENST00000489067 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
PRKCE-212ENST00000489067 FHAD1B1AJZ9 1412 aa16.93■□□□□ 0.3
PRKCE-212ENST00000489067 KIF13AQ9H1H9 1805 aa16.93■□□□□ 0.3
PRKCE-212ENST00000489067 BIVM-ERCC5R4GMW8 1640 aa16.91■□□□□ 0.3
PRKCE-212ENST00000489067 TOP2BQ02880 1626 aa16.89■□□□□ 0.29
PRKCE-212ENST00000489067 ERICH3Q5RHP9 1530 aa16.88■□□□□ 0.29
PRKCE-212ENST00000489067 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
PRKCE-212ENST00000489067 JPH4Q96JJ6 628 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms