RNA–Protein interactions for RNA: ENST00000488894.1

SLC35E1-206, Transcript of solute carrier family 35 member E1, humanhuman

TSL 2

Gene SLC35E1, Length 1,905 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35E1-206ENST00000488894 NISCHQ9Y2I1 1504 aa46.77■■■■■ 5.08
SLC35E1-206ENST00000488894 CCDC180Q9P1Z9 1646 aa40.54■■■■■ 4.08
SLC35E1-206ENST00000488894 ZCCHC6Q5VYS8 1495 aaKnown RBP39.36■■■■□ 3.89
SLC35E1-206ENST00000488894 DCAF8L2P0C7V8 631 aa38.62■■■■□ 3.77
SLC35E1-206ENST00000488894 SHROOM4Q9ULL8 1493 aa38.59■■■■□ 3.77
SLC35E1-206ENST00000488894 DCAF1Q9Y4B6 1507 aa38.59■■■■□ 3.77
SLC35E1-206ENST00000488894 ABCC9O60706 1549 aa38.07■■■■□ 3.68
SLC35E1-206ENST00000488894 MYO15BQ96JP2 1530 aa37.94■■■■□ 3.66
SLC35E1-206ENST00000488894 NACADO15069 1562 aa37.65■■■■□ 3.62
SLC35E1-206ENST00000488894 SCRIBQ14160 1630 aa37.44■■■■□ 3.58
SLC35E1-206ENST00000488894 SUPT5HO00267 1087 aaKnown RBP37.34■■■■□ 3.57
SLC35E1-206ENST00000488894 RB1CC1Q8TDY2 1594 aa37.24■■■■□ 3.55
SLC35E1-206ENST00000488894 UNC13AQ9UPW8 1703 aa36.65■■■■□ 3.46
SLC35E1-206ENST00000488894 RSF1Q96T23 1441 aaPredicted RBP36.48■■■■□ 3.43
SLC35E1-206ENST00000488894 CECR2Q9BXF3 1484 aa36.38■■■■□ 3.41
SLC35E1-206ENST00000488894 MROH2BQ7Z745 1585 aa36.2■■■■□ 3.39
SLC35E1-206ENST00000488894 BICRAQ9NZM4 1560 aa36.18■■■■□ 3.38
SLC35E1-206ENST00000488894 BAZ1AQ9NRL2 1556 aaPredicted RBP36.05■■■■□ 3.36
SLC35E1-206ENST00000488894 PABPN1Q86U42 306 aaKnown RBP eCLIP36.02■■■■□ 3.36
SLC35E1-206ENST00000488894 WIZO95785 1651 aa35.96■■■■□ 3.35
SLC35E1-206ENST00000488894 CHIC1Q5VXU3 224 aa35.93■■■■□ 3.34
SLC35E1-206ENST00000488894 SMARCA4P51532 1647 aa35.87■■■■□ 3.33
SLC35E1-206ENST00000488894 TOP2AP11388 1531 aaKnown RBP35.51■■■■□ 3.27
SLC35E1-206ENST00000488894 PEG3Q9GZU2 1588 aa35.37■■■■□ 3.25
SLC35E1-206ENST00000488894 SMARCA2P51531 1590 aa35.23■■■■□ 3.23
SLC35E1-206ENST00000488894 CCDC88BA6NC98 1476 aa35.2■■■■□ 3.23
SLC35E1-206ENST00000488894 ATAD2BQ9ULI0 1458 aa35.17■■■■□ 3.22
SLC35E1-206ENST00000488894 EIF4G1Q04637 1599 aaKnown RBP35.1■■■■□ 3.21
SLC35E1-206ENST00000488894 TRIM41Q8WV44 630 aa35.01■■■■□ 3.2
SLC35E1-206ENST00000488894 BAZ1BQ9UIG0 1483 aaKnown RBP34.99■■■■□ 3.19
SLC35E1-206ENST00000488894 NCAPD3P42695 1498 aa34.76■■■■□ 3.16
SLC35E1-206ENST00000488894 HMGXB3Q12766 1538 aa34.73■■■■□ 3.15
SLC35E1-206ENST00000488894 ABCC8Q09428 1581 aa34.65■■■■□ 3.14
SLC35E1-206ENST00000488894 LOC105371045A0A1W2PR82 267 aa34.65■■■■□ 3.14
SLC35E1-206ENST00000488894 FAM9AQ8IZU1 332 aaPredicted RBP34.47■■■■□ 3.11
SLC35E1-206ENST00000488894 CC2D2AQ9P2K1 1620 aa34.43■■■■□ 3.1
SLC35E1-206ENST00000488894 WRNQ14191 1432 aaPredicted RBP eCLIP34.29■■■■□ 3.08
SLC35E1-206ENST00000488894 SYNJ1O43426 1573 aa34.18■■■■□ 3.06
SLC35E1-206ENST00000488894 CFTRP13569 1480 aa34.12■■■■□ 3.05
SLC35E1-206ENST00000488894 SOGA1O94964 1423 aa34.08■■■■□ 3.05
SLC35E1-206ENST00000488894 EHMT2Q96KQ7 1210 aa34.02■■■■□ 3.04
SLC35E1-206ENST00000488894 PRDM2Q13029 1718 aa34.02■■■■□ 3.04
SLC35E1-206ENST00000488894 TOP2BQ02880 1626 aa33.97■■■■□ 3.03
SLC35E1-206ENST00000488894 EEA1Q15075 1411 aa33.97■■■■□ 3.03
SLC35E1-206ENST00000488894 RUSC2Q8N2Y8 1516 aa33.96■■■■□ 3.03
SLC35E1-206ENST00000488894 BIVM-ERCC5R4GMW8 1640 aa33.93■■■■□ 3.02
SLC35E1-206ENST00000488894 CADPSQ9ULU8 1353 aa33.92■■■■□ 3.02
SLC35E1-206ENST00000488894 CSRNP3Q8WYN3 585 aa33.83■■■■□ 3.01
SLC35E1-206ENST00000488894 CUX1P39880 1505 aa33.81■■■■□ 3
SLC35E1-206ENST00000488894 GOLGA3Q08378 1498 aa33.57■■■□□ 2.97
SLC35E1-206ENST00000488894 FANCD2Q9BXW9 1451 aa33.57■■■□□ 2.97
SLC35E1-206ENST00000488894 NESP48681 1621 aa33.57■■■□□ 2.96
SLC35E1-206ENST00000488894 KIF21BO75037 1637 aa33.56■■■□□ 2.96
SLC35E1-206ENST00000488894 TNIKQ9UKE5 1360 aa33.56■■■□□ 2.96
SLC35E1-206ENST00000488894 DNAJC5BQ9UF47 199 aa33.55■■■□□ 2.96
SLC35E1-206ENST00000488894 CEP164Q9UPV0 1460 aa33.53■■■□□ 2.96
SLC35E1-206ENST00000488894 LAMC3Q9Y6N6 1575 aa33.51■■■□□ 2.96
SLC35E1-206ENST00000488894 PCGF6Q9BYE7 350 aa33.48■■■□□ 2.95
SLC35E1-206ENST00000488894 UBTFP17480 764 aaKnown RBP33.47■■■□□ 2.95
SLC35E1-206ENST00000488894 CEP162Q5TB80 1403 aa33.44■■■□□ 2.94
SLC35E1-206ENST00000488894 KIF27Q86VH2 1401 aa33.38■■■□□ 2.93
SLC35E1-206ENST00000488894 FGD5Q6ZNL6 1462 aa33.36■■■□□ 2.93
SLC35E1-206ENST00000488894 RAPGEF2Q9Y4G8 1499 aa33.34■■■□□ 2.93
SLC35E1-206ENST00000488894 DNMBPQ6XZF7 1577 aa33.33■■■□□ 2.93
SLC35E1-206ENST00000488894 TRIM26Q12899 539 aaPredicted RBP33.31■■■□□ 2.92
SLC35E1-206ENST00000488894 PRXQ9BXM0 1461 aa33.27■■■□□ 2.92
SLC35E1-206ENST00000488894 TOPBP1Q92547 1522 aa33.26■■■□□ 2.92
SLC35E1-206ENST00000488894 ERICH3Q5RHP9 1530 aa33.24■■■□□ 2.91
SLC35E1-206ENST00000488894 PDS5BQ9NTI5 1447 aa33.23■■■□□ 2.91
SLC35E1-206ENST00000488894 CUX2O14529 1486 aa33.23■■■□□ 2.91
SLC35E1-206ENST00000488894 KIF21AQ7Z4S6 1674 aa33.17■■■□□ 2.9
SLC35E1-206ENST00000488894 URB2Q14146 1524 aaKnown RBP33.15■■■□□ 2.9
SLC35E1-206ENST00000488894 POLA1P09884 1462 aaPredicted RBP33.13■■■□□ 2.89
SLC35E1-206ENST00000488894 IGF1RP08069 1367 aa33.08■■■□□ 2.89
SLC35E1-206ENST00000488894 RAD54L2Q9Y4B4 1467 aa33.08■■■□□ 2.89
SLC35E1-206ENST00000488894 CLIP1P30622 1438 aa33.07■■■□□ 2.89
SLC35E1-206ENST00000488894 ABCA10Q8WWZ4 1543 aa33.04■■■□□ 2.88
SLC35E1-206ENST00000488894 PPARGC1BQ86YN6 1023 aaKnown RBP33.02■■■□□ 2.88
SLC35E1-206ENST00000488894 WDR97A6NE52 1622 aa32.93■■■□□ 2.86
SLC35E1-206ENST00000488894 CARMIL1Q5VZK9 1371 aa32.91■■■□□ 2.86
SLC35E1-206ENST00000488894 RANGAP1P46060 587 aaPredicted RBP32.88■■■□□ 2.85
SLC35E1-206ENST00000488894 HRCP23327 699 aa32.83■■■□□ 2.85
SLC35E1-206ENST00000488894 VPS8Q8N3P4 1428 aa32.83■■■□□ 2.85
SLC35E1-206ENST00000488894 MRC2Q9UBG0 1479 aa32.79■■■□□ 2.84
SLC35E1-206ENST00000488894 ABCA5Q8WWZ7 1642 aa32.76■■■□□ 2.83
SLC35E1-206ENST00000488894 CUL7Q14999 1698 aa32.74■■■□□ 2.83
SLC35E1-206ENST00000488894 TARBP1Q13395 1621 aaKnown RBP32.74■■■□□ 2.83
SLC35E1-206ENST00000488894 ARAP1Q96P48 1450 aa32.71■■■□□ 2.83
SLC35E1-206ENST00000488894 TDRD9Q8NDG6 1382 aaKnown RBP32.71■■■□□ 2.83
SLC35E1-206ENST00000488894 GAPVD1Q14C86 1478 aa32.67■■■□□ 2.82
SLC35E1-206ENST00000488894 TTBK1Q5TCY1 1321 aaPredicted RBP32.66■■■□□ 2.82
SLC35E1-206ENST00000488894 ARHGAP35Q9NRY4 1499 aa32.63■■■□□ 2.81
SLC35E1-206ENST00000488894 WDR62O43379 1518 aa32.61■■■□□ 2.81
SLC35E1-206ENST00000488894 ERCC6Q03468 1493 aa32.54■■■□□ 2.8
SLC35E1-206ENST00000488894 APLP2Q06481 763 aa32.53■■■□□ 2.8
SLC35E1-206ENST00000488894 PBRM1Q86U86 1689 aa32.49■■■□□ 2.79
SLC35E1-206ENST00000488894 CTTNBP2Q8WZ74 1663 aa32.49■■■□□ 2.79
SLC35E1-206ENST00000488894 IFT140Q96RY7 1462 aa32.45■■■□□ 2.79
SLC35E1-206ENST00000488894 THOC2Q8NI27 1593 aaKnown RBP32.44■■■□□ 2.78
SLC35E1-206ENST00000488894 AQRO60306 1485 aaKnown RBP eCLIP32.44■■■□□ 2.781e-7■■□□□ 13.9
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms