RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 AEBP2Q6ZN18 517 aaPredicted RBP33.19■■■□□ 2.9
SFXN5-219ENST00000488839 CHIC1Q5VXU3 224 aa31.09■■■□□ 2.57
SFXN5-219ENST00000488839 NISCHQ9Y2I1 1504 aa30.36■■■□□ 2.45
SFXN5-219ENST00000488839 SENP3Q9H4L4 574 aaPredicted RBP28.46■■■□□ 2.15
SFXN5-219ENST00000488839 PHF23Q9BUL5 403 aaPredicted RBP28■■■□□ 2.07
SFXN5-219ENST00000488839 CCDC180Q9P1Z9 1646 aa27.11■■□□□ 1.93
SFXN5-219ENST00000488839 ABCC9O60706 1549 aa26.65■■□□□ 1.86
SFXN5-219ENST00000488839 FOXD1Q16676 465 aa26.54■■□□□ 1.84
SFXN5-219ENST00000488839 RB1CC1Q8TDY2 1594 aa25.63■■□□□ 1.69
SFXN5-219ENST00000488839 NACADO15069 1562 aa25.58■■□□□ 1.69
SFXN5-219ENST00000488839 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
SFXN5-219ENST00000488839 DCAF8L2P0C7V8 631 aa25.39■■□□□ 1.66
SFXN5-219ENST00000488839 POTEDQ86YR6 584 aa25.28■■□□□ 1.64
SFXN5-219ENST00000488839 ZCCHC6Q5VYS8 1495 aaKnown RBP25.22■■□□□ 1.63
SFXN5-219ENST00000488839 DCAF1Q9Y4B6 1507 aa25.19■■□□□ 1.62
SFXN5-219ENST00000488839 MSH5O43196 834 aa25.1■■□□□ 1.61
SFXN5-219ENST00000488839 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
SFXN5-219ENST00000488839 PABPN1Q86U42 306 aaKnown RBP eCLIP24.85■■□□□ 1.57
SFXN5-219ENST00000488839 BICRAQ9NZM4 1560 aa24.8■■□□□ 1.56
SFXN5-219ENST00000488839 PIAS4Q8N2W9 510 aaPredicted RBP24.69■■□□□ 1.54
SFXN5-219ENST00000488839 DNAJC5BQ9UF47 199 aa24.68■■□□□ 1.54
SFXN5-219ENST00000488839 SHROOM4Q9ULL8 1493 aa24.68■■□□□ 1.54
SFXN5-219ENST00000488839 PLPPR3Q6T4P5 718 aa24.64■■□□□ 1.54
SFXN5-219ENST00000488839 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
SFXN5-219ENST00000488839 PPP6R1Q9UPN7 881 aa24.41■■□□□ 1.5
SFXN5-219ENST00000488839 ADRA2BP18089 450 aa24.31■■□□□ 1.48
SFXN5-219ENST00000488839 EIF4G1Q04637 1599 aaKnown RBP24.19■■□□□ 1.46
SFXN5-219ENST00000488839 CC2D2AQ9P2K1 1620 aa24.13■■□□□ 1.45
SFXN5-219ENST00000488839 CECR2Q9BXF3 1484 aa24.03■■□□□ 1.44
SFXN5-219ENST00000488839 NCAPD3P42695 1498 aa23.62■■□□□ 1.37
SFXN5-219ENST00000488839 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
SFXN5-219ENST00000488839 SMARCA4P51532 1647 aa23.56■■□□□ 1.36
SFXN5-219ENST00000488839 ATAD2BQ9ULI0 1458 aa23.54■■□□□ 1.36
SFXN5-219ENST00000488839 SMARCA2P51531 1590 aa23.52■■□□□ 1.36
SFXN5-219ENST00000488839 HMGXB3Q12766 1538 aa23.44■■□□□ 1.34
SFXN5-219ENST00000488839 PEG3Q9GZU2 1588 aa23.42■■□□□ 1.34
SFXN5-219ENST00000488839 MROH2BQ7Z745 1585 aa23.33■■□□□ 1.33
SFXN5-219ENST00000488839 BAZ1BQ9UIG0 1483 aaKnown RBP23.31■■□□□ 1.32
SFXN5-219ENST00000488839 WIZO95785 1651 aa23.03■■□□□ 1.28
SFXN5-219ENST00000488839 ERCC6Q03468 1493 aa23.03■■□□□ 1.28
SFXN5-219ENST00000488839 RSF1Q96T23 1441 aaPredicted RBP23.02■■□□□ 1.28
SFXN5-219ENST00000488839 LAMC3Q9Y6N6 1575 aa23■■□□□ 1.27
SFXN5-219ENST00000488839 NESP48681 1621 aa22.97■■□□□ 1.27
SFXN5-219ENST00000488839 CUX2O14529 1486 aa22.95■■□□□ 1.26
SFXN5-219ENST00000488839 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.26
SFXN5-219ENST00000488839 PDS5BQ9NTI5 1447 aa22.89■■□□□ 1.25
SFXN5-219ENST00000488839 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
SFXN5-219ENST00000488839 THOC2Q8NI27 1593 aaKnown RBP22.71■■□□□ 1.23
SFXN5-219ENST00000488839 CFTRP13569 1480 aa22.7■■□□□ 1.22
SFXN5-219ENST00000488839 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
SFXN5-219ENST00000488839 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
SFXN5-219ENST00000488839 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.2
SFXN5-219ENST00000488839 CEP164Q9UPV0 1460 aa22.58■■□□□ 1.2
SFXN5-219ENST00000488839 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
SFXN5-219ENST00000488839 WDR62O43379 1518 aa22.54■■□□□ 1.2
SFXN5-219ENST00000488839 DNAJC5Q9H3Z4 198 aa22.52■■□□□ 1.2
SFXN5-219ENST00000488839 DMRT2Q9Y5R5 561 aa22.48■■□□□ 1.19
SFXN5-219ENST00000488839 MAPK8IP2Q13387 824 aaPredicted RBP22.47■■□□□ 1.19
SFXN5-219ENST00000488839 PRDM2Q13029 1718 aa22.45■■□□□ 1.18
SFXN5-219ENST00000488839 SCAF1Q9H7N4 1312 aaKnown RBP22.34■■□□□ 1.17
SFXN5-219ENST00000488839 URB2Q14146 1524 aaKnown RBP22.33■■□□□ 1.17
SFXN5-219ENST00000488839 ABCC8Q09428 1581 aa22.29■■□□□ 1.16
SFXN5-219ENST00000488839 SUPT5HO00267 1087 aaKnown RBP22.19■■□□□ 1.14
SFXN5-219ENST00000488839 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
SFXN5-219ENST00000488839 IFT140Q96RY7 1462 aa22.15■■□□□ 1.14
SFXN5-219ENST00000488839 DNMBPQ6XZF7 1577 aa22.15■■□□□ 1.14
SFXN5-219ENST00000488839 POLA1P09884 1462 aaPredicted RBP21.97■■□□□ 1.11
SFXN5-219ENST00000488839 ZNF608Q9ULD9 1512 aaPredicted RBP21.97■■□□□ 1.11
SFXN5-219ENST00000488839 OSCARQ8IYS5 282 aa21.97■■□□□ 1.11
SFXN5-219ENST00000488839 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
SFXN5-219ENST00000488839 SOGA1O94964 1423 aa21.92■■□□□ 1.1
SFXN5-219ENST00000488839 CUX1P39880 1505 aa21.9■■□□□ 1.1
SFXN5-219ENST00000488839 EIF4G3O43432 1585 aaKnown RBP21.88■■□□□ 1.09
SFXN5-219ENST00000488839 FGD5Q6ZNL6 1462 aa21.88■■□□□ 1.09
SFXN5-219ENST00000488839 WDR97A6NE52 1622 aa21.88■■□□□ 1.09
SFXN5-219ENST00000488839 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.09
SFXN5-219ENST00000488839 RAD54L2Q9Y4B4 1467 aa21.84■■□□□ 1.09
SFXN5-219ENST00000488839 CACNB1Q02641 598 aaPredicted RBP21.81■■□□□ 1.08
SFXN5-219ENST00000488839 TDRD9Q8NDG6 1382 aaKnown RBP21.77■■□□□ 1.08
SFXN5-219ENST00000488839 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
SFXN5-219ENST00000488839 ABCA10Q8WWZ4 1543 aa21.71■■□□□ 1.07
SFXN5-219ENST00000488839 GRIN2BQ13224 1484 aa21.7■■□□□ 1.06
SFXN5-219ENST00000488839 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
SFXN5-219ENST00000488839 MAGI1Q96QZ7 1491 aaPredicted RBP21.68■■□□□ 1.06
SFXN5-219ENST00000488839 BIVM-ERCC5R4GMW8 1640 aa21.68■■□□□ 1.06
SFXN5-219ENST00000488839 GAPVD1Q14C86 1478 aa21.64■■□□□ 1.06
SFXN5-219ENST00000488839 FBLN2P98095 1184 aa21.63■■□□□ 1.05
SFXN5-219ENST00000488839 SNAPC4Q5SXM2 1469 aa21.63■■□□□ 1.05
SFXN5-219ENST00000488839 CHD1O14646 1710 aa21.63■■□□□ 1.05
SFXN5-219ENST00000488839 CHMP7Q8WUX9 453 aaPredicted RBP21.6■■□□□ 1.05
SFXN5-219ENST00000488839 SYNJ1O43426 1573 aa21.6■■□□□ 1.05
SFXN5-219ENST00000488839 ABCA5Q8WWZ7 1642 aa21.59■■□□□ 1.05
SFXN5-219ENST00000488839 SYNJ2O15056 1496 aa21.58■■□□□ 1.05
SFXN5-219ENST00000488839 DCAF8L1A6NGE4 600 aa21.55■■□□□ 1.04
SFXN5-219ENST00000488839 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
SFXN5-219ENST00000488839 PBRM1Q86U86 1689 aa21.55■■□□□ 1.04
SFXN5-219ENST00000488839 ARHGEF11O15085 1522 aa21.53■■□□□ 1.04
SFXN5-219ENST00000488839 RIMBP3CA6NJZ7 1639 aa21.52■■□□□ 1.04
SFXN5-219ENST00000488839 RIMBP3BA6NNM3 1639 aa21.52■■□□□ 1.04
SFXN5-219ENST00000488839 RIMBP3Q9UFD9 1639 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms