RNA–Protein interactions for RNA: ENST00000488780.6

PCNX2-213, Transcript of pecanex 2, humanhuman

TSL 5 BASIC

Gene PCNX2, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-213ENST00000488780 NISCHQ9Y2I1 1504 aa27.74■■■□□ 2.03
PCNX2-213ENST00000488780 AEBP2Q6ZN18 517 aaPredicted RBP25.42■■□□□ 1.66
PCNX2-213ENST00000488780 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
PCNX2-213ENST00000488780 ABCC9O60706 1549 aa24.46■■□□□ 1.51
PCNX2-213ENST00000488780 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
PCNX2-213ENST00000488780 RB1CC1Q8TDY2 1594 aa23.43■■□□□ 1.34
PCNX2-213ENST00000488780 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
PCNX2-213ENST00000488780 NACADO15069 1562 aa23.34■■□□□ 1.33
PCNX2-213ENST00000488780 MYO15BQ96JP2 1530 aa23.11■■□□□ 1.29
PCNX2-213ENST00000488780 ZCCHC6Q5VYS8 1495 aaKnown RBP23.04■■□□□ 1.28
PCNX2-213ENST00000488780 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
PCNX2-213ENST00000488780 UNC13AQ9UPW8 1703 aa22.87■■□□□ 1.25
PCNX2-213ENST00000488780 PABPN1Q86U42 306 aaKnown RBP eCLIP22.84■■□□□ 1.25
PCNX2-213ENST00000488780 BICRAQ9NZM4 1560 aa22.69■■□□□ 1.22
PCNX2-213ENST00000488780 DNAJC5BQ9UF47 199 aa22.66■■□□□ 1.22
PCNX2-213ENST00000488780 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
PCNX2-213ENST00000488780 SHROOM4Q9ULL8 1493 aa22.45■■□□□ 1.18
PCNX2-213ENST00000488780 EIF4G1Q04637 1599 aaKnown RBP22.13■■□□□ 1.13
PCNX2-213ENST00000488780 CC2D2AQ9P2K1 1620 aa22.1■■□□□ 1.13
PCNX2-213ENST00000488780 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
PCNX2-213ENST00000488780 SENP3Q9H4L4 574 aaPredicted RBP21.68■■□□□ 1.06
PCNX2-213ENST00000488780 SMARCA4P51532 1647 aa21.56■■□□□ 1.04
PCNX2-213ENST00000488780 NCAPD3P42695 1498 aa21.53■■□□□ 1.04
PCNX2-213ENST00000488780 BAZ1AQ9NRL2 1556 aaPredicted RBP21.52■■□□□ 1.04
PCNX2-213ENST00000488780 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
PCNX2-213ENST00000488780 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
PCNX2-213ENST00000488780 PHF23Q9BUL5 403 aaPredicted RBP21.41■■□□□ 1.02
PCNX2-213ENST00000488780 HMGXB3Q12766 1538 aa21.4■■□□□ 1.02
PCNX2-213ENST00000488780 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
PCNX2-213ENST00000488780 PEG3Q9GZU2 1588 aa21.35■■□□□ 1.01
PCNX2-213ENST00000488780 BAZ1BQ9UIG0 1483 aaKnown RBP21.33■■□□□ 1.01
PCNX2-213ENST00000488780 WIZO95785 1651 aa21.13■□□□□ 0.97
PCNX2-213ENST00000488780 ERCC6Q03468 1493 aa21.12■□□□□ 0.97
PCNX2-213ENST00000488780 NESP48681 1621 aa21.09■□□□□ 0.97
PCNX2-213ENST00000488780 RSF1Q96T23 1441 aaPredicted RBP21.04■□□□□ 0.96
PCNX2-213ENST00000488780 LAMC3Q9Y6N6 1575 aa21.01■□□□□ 0.95
PCNX2-213ENST00000488780 CUX2O14529 1486 aa20.96■□□□□ 0.95
PCNX2-213ENST00000488780 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
PCNX2-213ENST00000488780 PDS5BQ9NTI5 1447 aa20.9■□□□□ 0.94
PCNX2-213ENST00000488780 TOP2AP11388 1531 aaKnown RBP20.89■□□□□ 0.94
PCNX2-213ENST00000488780 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.92
PCNX2-213ENST00000488780 THOC2Q8NI27 1593 aaKnown RBP20.8■□□□□ 0.92
PCNX2-213ENST00000488780 CFTRP13569 1480 aa20.72■□□□□ 0.91
PCNX2-213ENST00000488780 MRC2Q9UBG0 1479 aa20.68■□□□□ 0.9
PCNX2-213ENST00000488780 FANCD2Q9BXW9 1451 aa20.67■□□□□ 0.9
PCNX2-213ENST00000488780 CCDC88BA6NC98 1476 aa20.66■□□□□ 0.9
PCNX2-213ENST00000488780 CEP164Q9UPV0 1460 aa20.66■□□□□ 0.9
PCNX2-213ENST00000488780 DNAJC5Q9H3Z4 198 aa20.61■□□□□ 0.89
PCNX2-213ENST00000488780 WDR62O43379 1518 aa20.6■□□□□ 0.89
PCNX2-213ENST00000488780 PRDM2Q13029 1718 aa20.54■□□□□ 0.88
PCNX2-213ENST00000488780 URB2Q14146 1524 aaKnown RBP20.45■□□□□ 0.86
PCNX2-213ENST00000488780 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
PCNX2-213ENST00000488780 ABCC8Q09428 1581 aa20.31■□□□□ 0.84
PCNX2-213ENST00000488780 TOPBP1Q92547 1522 aa20.3■□□□□ 0.84
PCNX2-213ENST00000488780 FOXD1Q16676 465 aa20.28■□□□□ 0.84
PCNX2-213ENST00000488780 DNMBPQ6XZF7 1577 aa20.26■□□□□ 0.83
PCNX2-213ENST00000488780 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
PCNX2-213ENST00000488780 ZNF608Q9ULD9 1512 aaPredicted RBP20.16■□□□□ 0.82
PCNX2-213ENST00000488780 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
PCNX2-213ENST00000488780 OSCARQ8IYS5 282 aa20.09■□□□□ 0.81
PCNX2-213ENST00000488780 TARBP1Q13395 1621 aaKnown RBP20.08■□□□□ 0.81
PCNX2-213ENST00000488780 EIF4G3O43432 1585 aaKnown RBP20.06■□□□□ 0.8
PCNX2-213ENST00000488780 SOGA1O94964 1423 aa20.05■□□□□ 0.8
PCNX2-213ENST00000488780 CUX1P39880 1505 aa20.05■□□□□ 0.8
PCNX2-213ENST00000488780 RAD54L2Q9Y4B4 1467 aa20.04■□□□□ 0.8
PCNX2-213ENST00000488780 AQRO60306 1485 aaKnown RBP eCLIP20.03■□□□□ 0.8
PCNX2-213ENST00000488780 FGD5Q6ZNL6 1462 aa20.03■□□□□ 0.8
PCNX2-213ENST00000488780 TDRD9Q8NDG6 1382 aaKnown RBP19.97■□□□□ 0.79
PCNX2-213ENST00000488780 WDR97A6NE52 1622 aa19.93■□□□□ 0.78
PCNX2-213ENST00000488780 FBLN2P98095 1184 aa19.88■□□□□ 0.77
PCNX2-213ENST00000488780 WRNQ14191 1432 aaPredicted RBP eCLIP19.86■□□□□ 0.77
PCNX2-213ENST00000488780 CHD1O14646 1710 aa19.86■□□□□ 0.77
PCNX2-213ENST00000488780 TRIM41Q8WV44 630 aa19.86■□□□□ 0.77
PCNX2-213ENST00000488780 GRIN2BQ13224 1484 aa19.84■□□□□ 0.77
PCNX2-213ENST00000488780 TOP2BQ02880 1626 aa19.83■□□□□ 0.77
PCNX2-213ENST00000488780 ABCA10Q8WWZ4 1543 aa19.83■□□□□ 0.77
PCNX2-213ENST00000488780 SNAPC4Q5SXM2 1469 aa19.83■□□□□ 0.77
PCNX2-213ENST00000488780 BIVM-ERCC5R4GMW8 1640 aa19.82■□□□□ 0.76
PCNX2-213ENST00000488780 GAPVD1Q14C86 1478 aa19.81■□□□□ 0.76
PCNX2-213ENST00000488780 SYNJ1O43426 1573 aa19.8■□□□□ 0.76
PCNX2-213ENST00000488780 MAGI1Q96QZ7 1491 aaPredicted RBP19.8■□□□□ 0.76
PCNX2-213ENST00000488780 CHMP7Q8WUX9 453 aaPredicted RBP19.79■□□□□ 0.76
PCNX2-213ENST00000488780 PBRM1Q86U86 1689 aa19.77■□□□□ 0.75
PCNX2-213ENST00000488780 ABCA5Q8WWZ7 1642 aa19.76■□□□□ 0.75
PCNX2-213ENST00000488780 RIMBP3CA6NJZ7 1639 aa19.75■□□□□ 0.75
PCNX2-213ENST00000488780 RIMBP3BA6NNM3 1639 aa19.75■□□□□ 0.75
PCNX2-213ENST00000488780 RIMBP3Q9UFD9 1639 aa19.75■□□□□ 0.75
PCNX2-213ENST00000488780 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
PCNX2-213ENST00000488780 ARHGEF11O15085 1522 aa19.72■□□□□ 0.75
PCNX2-213ENST00000488780 CLASP1Q7Z460 1538 aa19.63■□□□□ 0.73
PCNX2-213ENST00000488780 CYB5RLQ6IPT4 315 aa19.6■□□□□ 0.73
PCNX2-213ENST00000488780 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
PCNX2-213ENST00000488780 ADAMTS12P58397 1594 aa19.59■□□□□ 0.73
PCNX2-213ENST00000488780 FHAD1B1AJZ9 1412 aa19.58■□□□□ 0.72
PCNX2-213ENST00000488780 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
PCNX2-213ENST00000488780 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
PCNX2-213ENST00000488780 NUP160Q12769 1436 aa19.48■□□□□ 0.71
PCNX2-213ENST00000488780 KIF27Q86VH2 1401 aa19.47■□□□□ 0.71
PCNX2-213ENST00000488780 CEP170Q5SW79 1584 aa19.47■□□□□ 0.71
PCNX2-213ENST00000488780 IGF1RP08069 1367 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms