RNA–Protein interactions for RNA: ENST00000488724.5

GAD1-214, Transcript of glutamate decarboxylase 1, humanhuman

TSL 1 (best)

Gene GAD1, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAD1-214ENST00000488724 NISCHQ9Y2I1 1504 aa29.87■■■□□ 2.37
GAD1-214ENST00000488724 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
GAD1-214ENST00000488724 CHIC1Q5VXU3 224 aa28.84■■■□□ 2.21
GAD1-214ENST00000488724 CCDC180Q9P1Z9 1646 aa26.68■■□□□ 1.86
GAD1-214ENST00000488724 ABCC9O60706 1549 aa26.3■■□□□ 1.8
GAD1-214ENST00000488724 SENP3Q9H4L4 574 aaPredicted RBP25.4■■□□□ 1.66
GAD1-214ENST00000488724 PHF23Q9BUL5 403 aaPredicted RBP25.3■■□□□ 1.64
GAD1-214ENST00000488724 RB1CC1Q8TDY2 1594 aa25.28■■□□□ 1.64
GAD1-214ENST00000488724 NACADO15069 1562 aa25.22■■□□□ 1.63
GAD1-214ENST00000488724 MYO15BQ96JP2 1530 aa25.07■■□□□ 1.6
GAD1-214ENST00000488724 DCAF8L2P0C7V8 631 aa25.01■■□□□ 1.59
GAD1-214ENST00000488724 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
GAD1-214ENST00000488724 ZCCHC6Q5VYS8 1495 aaKnown RBP24.81■■□□□ 1.56
GAD1-214ENST00000488724 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
GAD1-214ENST00000488724 UNC13AQ9UPW8 1703 aa24.49■■□□□ 1.51
GAD1-214ENST00000488724 BICRAQ9NZM4 1560 aa24.44■■□□□ 1.5
GAD1-214ENST00000488724 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
GAD1-214ENST00000488724 SHROOM4Q9ULL8 1493 aa24.39■■□□□ 1.5
GAD1-214ENST00000488724 SCRIBQ14160 1630 aa24.18■■□□□ 1.46
GAD1-214ENST00000488724 EIF4G1Q04637 1599 aaKnown RBP23.85■■□□□ 1.41
GAD1-214ENST00000488724 CC2D2AQ9P2K1 1620 aa23.79■■□□□ 1.4
GAD1-214ENST00000488724 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
GAD1-214ENST00000488724 FOXD1Q16676 465 aa23.56■■□□□ 1.36
GAD1-214ENST00000488724 PLPPR3Q6T4P5 718 aa23.34■■□□□ 1.33
GAD1-214ENST00000488724 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
GAD1-214ENST00000488724 ATAD2BQ9ULI0 1458 aa23.2■■□□□ 1.3
GAD1-214ENST00000488724 SMARCA2P51531 1590 aa23.19■■□□□ 1.3
GAD1-214ENST00000488724 BAZ1AQ9NRL2 1556 aaPredicted RBP23.19■■□□□ 1.3
GAD1-214ENST00000488724 SMARCA4P51532 1647 aa23.19■■□□□ 1.3
GAD1-214ENST00000488724 HMGXB3Q12766 1538 aa23.11■■□□□ 1.29
GAD1-214ENST00000488724 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
GAD1-214ENST00000488724 BAZ1BQ9UIG0 1483 aaKnown RBP22.98■■□□□ 1.27
GAD1-214ENST00000488724 MROH2BQ7Z745 1585 aa22.94■■□□□ 1.26
GAD1-214ENST00000488724 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
GAD1-214ENST00000488724 CUX2O14529 1486 aa22.73■■□□□ 1.23
GAD1-214ENST00000488724 LAMC3Q9Y6N6 1575 aa22.68■■□□□ 1.22
GAD1-214ENST00000488724 NESP48681 1621 aa22.64■■□□□ 1.22
GAD1-214ENST00000488724 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.21
GAD1-214ENST00000488724 WIZO95785 1651 aa22.62■■□□□ 1.21
GAD1-214ENST00000488724 PDS5BQ9NTI5 1447 aa22.6■■□□□ 1.21
GAD1-214ENST00000488724 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
GAD1-214ENST00000488724 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
GAD1-214ENST00000488724 PPP6R1Q9UPN7 881 aa22.42■■□□□ 1.18
GAD1-214ENST00000488724 ADRA2BP18089 450 aa22.41■■□□□ 1.18
GAD1-214ENST00000488724 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.18
GAD1-214ENST00000488724 DNAJC5Q9H3Z4 198 aa22.38■■□□□ 1.17
GAD1-214ENST00000488724 CFTRP13569 1480 aa22.38■■□□□ 1.17
GAD1-214ENST00000488724 KIF21AQ7Z4S6 1674 aa22.32■■□□□ 1.16
GAD1-214ENST00000488724 MRC2Q9UBG0 1479 aa22.31■■□□□ 1.16
GAD1-214ENST00000488724 CEP164Q9UPV0 1460 aa22.28■■□□□ 1.16
GAD1-214ENST00000488724 FANCD2Q9BXW9 1451 aa22.27■■□□□ 1.16
GAD1-214ENST00000488724 WDR62O43379 1518 aa22.23■■□□□ 1.15
GAD1-214ENST00000488724 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
GAD1-214ENST00000488724 PIAS4Q8N2W9 510 aaPredicted RBP22.19■■□□□ 1.14
GAD1-214ENST00000488724 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
GAD1-214ENST00000488724 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
GAD1-214ENST00000488724 ABCC8Q09428 1581 aa21.99■■□□□ 1.11
GAD1-214ENST00000488724 MSH5O43196 834 aa21.91■■□□□ 1.1
GAD1-214ENST00000488724 TOPBP1Q92547 1522 aa21.86■■□□□ 1.09
GAD1-214ENST00000488724 IFT140Q96RY7 1462 aa21.86■■□□□ 1.09
GAD1-214ENST00000488724 DNMBPQ6XZF7 1577 aa21.81■■□□□ 1.08
GAD1-214ENST00000488724 SUPT5HO00267 1087 aaKnown RBP21.76■■□□□ 1.07
GAD1-214ENST00000488724 OSCARQ8IYS5 282 aa21.74■■□□□ 1.07
GAD1-214ENST00000488724 ZNF608Q9ULD9 1512 aaPredicted RBP21.66■■□□□ 1.06
GAD1-214ENST00000488724 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
GAD1-214ENST00000488724 SOGA1O94964 1423 aa21.62■■□□□ 1.05
GAD1-214ENST00000488724 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
GAD1-214ENST00000488724 WDR97A6NE52 1622 aa21.57■■□□□ 1.04
GAD1-214ENST00000488724 EIF4G3O43432 1585 aaKnown RBP21.56■■□□□ 1.04
GAD1-214ENST00000488724 CUX1P39880 1505 aa21.55■■□□□ 1.04
GAD1-214ENST00000488724 AQRO60306 1485 aaKnown RBP eCLIP21.54■■□□□ 1.04
GAD1-214ENST00000488724 FGD5Q6ZNL6 1462 aa21.53■■□□□ 1.04
GAD1-214ENST00000488724 RAD54L2Q9Y4B4 1467 aa21.51■■□□□ 1.03
GAD1-214ENST00000488724 TDRD9Q8NDG6 1382 aaKnown RBP21.47■■□□□ 1.03
GAD1-214ENST00000488724 GRIN2BQ13224 1484 aa21.4■■□□□ 1.02
GAD1-214ENST00000488724 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.02
GAD1-214ENST00000488724 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.02
GAD1-214ENST00000488724 ABCA10Q8WWZ4 1543 aa21.39■■□□□ 1.01
GAD1-214ENST00000488724 FBLN2P98095 1184 aa21.35■■□□□ 1.01
GAD1-214ENST00000488724 TRIM41Q8WV44 630 aa21.35■■□□□ 1.01
GAD1-214ENST00000488724 GAPVD1Q14C86 1478 aa21.33■■□□□ 1.01
GAD1-214ENST00000488724 SNAPC4Q5SXM2 1469 aa21.33■■□□□ 1.01
GAD1-214ENST00000488724 CHMP7Q8WUX9 453 aaPredicted RBP21.33■■□□□ 1.01
GAD1-214ENST00000488724 TOP2BQ02880 1626 aa21.32■■□□□ 1
GAD1-214ENST00000488724 SYNJ2O15056 1496 aa21.29■■□□□ 1
GAD1-214ENST00000488724 BIVM-ERCC5R4GMW8 1640 aa21.29■■□□□ 1
GAD1-214ENST00000488724 CHD1O14646 1710 aa21.27■■□□□ 1
GAD1-214ENST00000488724 ARHGEF11O15085 1522 aa21.27■■□□□ 1
GAD1-214ENST00000488724 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
GAD1-214ENST00000488724 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
GAD1-214ENST00000488724 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
GAD1-214ENST00000488724 ABCA5Q8WWZ7 1642 aa21.25■□□□□ 0.99
GAD1-214ENST00000488724 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
GAD1-214ENST00000488724 CLASP1Q7Z460 1538 aa21.17■□□□□ 0.98
GAD1-214ENST00000488724 PBRM1Q86U86 1689 aa21.17■□□□□ 0.98
GAD1-214ENST00000488724 ERICH3Q5RHP9 1530 aa21.14■□□□□ 0.97
GAD1-214ENST00000488724 FHAD1B1AJZ9 1412 aa21.12■□□□□ 0.97
GAD1-214ENST00000488724 CYB5RLQ6IPT4 315 aa21.12■□□□□ 0.97
GAD1-214ENST00000488724 GRIN2AQ12879 1464 aa21.09■□□□□ 0.97
GAD1-214ENST00000488724 ARAP1Q96P48 1450 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms