RNA–Protein interactions for RNA: ENST00000488675.5

TSC2-214, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-214ENST00000488675 AEBP2Q6ZN18 517 aaPredicted RBP42.7■■■■■ 4.43
TSC2-214ENST00000488675 CHIC1Q5VXU3 224 aa42.05■■■■■ 4.32
TSC2-214ENST00000488675 NISCHQ9Y2I1 1504 aa41.72■■■■■ 4.27
TSC2-214ENST00000488675 ABCC9O60706 1549 aa38.29■■■■□ 3.72
TSC2-214ENST00000488675 CCDC180Q9P1Z9 1646 aa37.67■■■■□ 3.62
TSC2-214ENST00000488675 PHF23Q9BUL5 403 aaPredicted RBP37■■■■□ 3.51
TSC2-214ENST00000488675 DNAJC5BQ9UF47 199 aa36.53■■■■□ 3.44
TSC2-214ENST00000488675 SENP3Q9H4L4 574 aaPredicted RBP36.25■■■■□ 3.39
TSC2-214ENST00000488675 RB1CC1Q8TDY2 1594 aa36.18■■■■□ 3.38
TSC2-214ENST00000488675 NACADO15069 1562 aa35.8■■■■□ 3.32
TSC2-214ENST00000488675 PABPN1Q86U42 306 aaKnown RBP eCLIP35.57■■■■□ 3.28
TSC2-214ENST00000488675 DCAF8L2P0C7V8 631 aa35.46■■■■□ 3.27
TSC2-214ENST00000488675 UNC13AQ9UPW8 1703 aa35.26■■■■□ 3.24
TSC2-214ENST00000488675 BICRAQ9NZM4 1560 aa35.16■■■■□ 3.22
TSC2-214ENST00000488675 MYO15BQ96JP2 1530 aa35.15■■■■□ 3.22
TSC2-214ENST00000488675 SHROOM4Q9ULL8 1493 aa34.66■■■■□ 3.14
TSC2-214ENST00000488675 CECR2Q9BXF3 1484 aa34.58■■■■□ 3.13
TSC2-214ENST00000488675 CC2D2AQ9P2K1 1620 aa34.55■■■■□ 3.12
TSC2-214ENST00000488675 DCAF1Q9Y4B6 1507 aa34.45■■■■□ 3.11
TSC2-214ENST00000488675 ZCCHC6Q5VYS8 1495 aaKnown RBP34.43■■■■□ 3.1
TSC2-214ENST00000488675 EIF4G1Q04637 1599 aaKnown RBP34.34■■■■□ 3.09
TSC2-214ENST00000488675 PLPPR3Q6T4P5 718 aa34.33■■■■□ 3.09
TSC2-214ENST00000488675 SCRIBQ14160 1630 aa34.26■■■■□ 3.07
TSC2-214ENST00000488675 DNAJC5Q9H3Z4 198 aa34.03■■■■□ 3.04
TSC2-214ENST00000488675 FOXD1Q16676 465 aa33.57■■■□□ 2.96
TSC2-214ENST00000488675 CUX2O14529 1486 aa33.29■■■□□ 2.92
TSC2-214ENST00000488675 NCAPD3P42695 1498 aa33.1■■■□□ 2.89
TSC2-214ENST00000488675 ERCC6Q03468 1493 aa33.1■■■□□ 2.89
TSC2-214ENST00000488675 ATAD2BQ9ULI0 1458 aa32.87■■■□□ 2.85
TSC2-214ENST00000488675 HMGXB3Q12766 1538 aa32.75■■■□□ 2.83
TSC2-214ENST00000488675 SMARCA2P51531 1590 aa32.74■■■□□ 2.83
TSC2-214ENST00000488675 NESP48681 1621 aa32.71■■■□□ 2.83
TSC2-214ENST00000488675 SMARCA4P51532 1647 aa32.64■■■□□ 2.82
TSC2-214ENST00000488675 ADRA2BP18089 450 aa32.57■■■□□ 2.8
TSC2-214ENST00000488675 PPP6R1Q9UPN7 881 aa32.54■■■□□ 2.8
TSC2-214ENST00000488675 BAZ1BQ9UIG0 1483 aaKnown RBP32.5■■■□□ 2.79
TSC2-214ENST00000488675 THOC2Q8NI27 1593 aaKnown RBP32.49■■■□□ 2.79
TSC2-214ENST00000488675 BAZ1AQ9NRL2 1556 aaPredicted RBP32.42■■■□□ 2.78
TSC2-214ENST00000488675 LAMC3Q9Y6N6 1575 aa32.41■■■□□ 2.78
TSC2-214ENST00000488675 PEG3Q9GZU2 1588 aa32.37■■■□□ 2.77
TSC2-214ENST00000488675 PDS5BQ9NTI5 1447 aa32.26■■■□□ 2.76
TSC2-214ENST00000488675 KIF21AQ7Z4S6 1674 aa32.21■■■□□ 2.75
TSC2-214ENST00000488675 TRIM41Q8WV44 630 aa32.2■■■□□ 2.75
TSC2-214ENST00000488675 MROH2BQ7Z745 1585 aa32.12■■■□□ 2.73
TSC2-214ENST00000488675 CADPSQ9ULU8 1353 aa32.05■■■□□ 2.72
TSC2-214ENST00000488675 MRC2Q9UBG0 1479 aa32■■■□□ 2.71
TSC2-214ENST00000488675 WDR62O43379 1518 aa31.94■■■□□ 2.7
TSC2-214ENST00000488675 PIAS4Q8N2W9 510 aaPredicted RBP31.79■■■□□ 2.68
TSC2-214ENST00000488675 CEP164Q9UPV0 1460 aa31.74■■■□□ 2.67
TSC2-214ENST00000488675 OSCARQ8IYS5 282 aa31.7■■■□□ 2.67
TSC2-214ENST00000488675 WIZO95785 1651 aa31.67■■■□□ 2.66
TSC2-214ENST00000488675 FANCD2Q9BXW9 1451 aa31.65■■■□□ 2.66
TSC2-214ENST00000488675 CFTRP13569 1480 aa31.55■■■□□ 2.64
TSC2-214ENST00000488675 URB2Q14146 1524 aaKnown RBP31.44■■■□□ 2.62
TSC2-214ENST00000488675 RSF1Q96T23 1441 aaPredicted RBP31.38■■■□□ 2.61
TSC2-214ENST00000488675 RIMBP3CA6NJZ7 1639 aa31.27■■■□□ 2.6
TSC2-214ENST00000488675 RIMBP3BA6NNM3 1639 aa31.27■■■□□ 2.6
TSC2-214ENST00000488675 RIMBP3Q9UFD9 1639 aa31.27■■■□□ 2.6
TSC2-214ENST00000488675 TOP2AP11388 1531 aaKnown RBP31.26■■■□□ 2.59
TSC2-214ENST00000488675 IFT140Q96RY7 1462 aa31.15■■■□□ 2.58
TSC2-214ENST00000488675 ZNF608Q9ULD9 1512 aaPredicted RBP31.14■■■□□ 2.58
TSC2-214ENST00000488675 ARHGEF11O15085 1522 aa31.14■■■□□ 2.57
TSC2-214ENST00000488675 PRDM2Q13029 1718 aa31.05■■■□□ 2.56
TSC2-214ENST00000488675 TOPBP1Q92547 1522 aa30.98■■■□□ 2.55
TSC2-214ENST00000488675 CYB5RLQ6IPT4 315 aa30.97■■■□□ 2.55
TSC2-214ENST00000488675 CCDC88BA6NC98 1476 aa30.94■■■□□ 2.54
TSC2-214ENST00000488675 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
TSC2-214ENST00000488675 EIF4G3O43432 1585 aaKnown RBP30.91■■■□□ 2.54
TSC2-214ENST00000488675 ABCC8Q09428 1581 aa30.91■■■□□ 2.54
TSC2-214ENST00000488675 MSH5O43196 834 aa30.88■■■□□ 2.53
TSC2-214ENST00000488675 TRHP20396 242 aaPredicted RBP30.81■■■□□ 2.52
TSC2-214ENST00000488675 DNMBPQ6XZF7 1577 aa30.8■■■□□ 2.52
TSC2-214ENST00000488675 AQRO60306 1485 aaKnown RBP eCLIP30.79■■■□□ 2.528e-8■■■■□ 20.2
TSC2-214ENST00000488675 ARAP1Q96P48 1450 aa30.79■■■□□ 2.52
TSC2-214ENST00000488675 CHD1O14646 1710 aa30.76■■■□□ 2.51
TSC2-214ENST00000488675 TARBP1Q13395 1621 aaKnown RBP30.75■■■□□ 2.51
TSC2-214ENST00000488675 FBLN2P98095 1184 aa30.71■■■□□ 2.51
TSC2-214ENST00000488675 POLA1P09884 1462 aaPredicted RBP30.63■■■□□ 2.49
TSC2-214ENST00000488675 RAD54L2Q9Y4B4 1467 aa30.52■■■□□ 2.48
TSC2-214ENST00000488675 TDRD9Q8NDG6 1382 aaKnown RBP30.52■■■□□ 2.48
TSC2-214ENST00000488675 SOGA1O94964 1423 aa30.5■■■□□ 2.47
TSC2-214ENST00000488675 CLASP1Q7Z460 1538 aa30.47■■■□□ 2.47
TSC2-214ENST00000488675 SNAPC4Q5SXM2 1469 aa30.44■■■□□ 2.46
TSC2-214ENST00000488675 CHMP7Q8WUX9 453 aaPredicted RBP30.41■■■□□ 2.46
TSC2-214ENST00000488675 WDR97A6NE52 1622 aa30.4■■■□□ 2.46
TSC2-214ENST00000488675 SYNJ1O43426 1573 aa30.37■■■□□ 2.45
TSC2-214ENST00000488675 MAGI1Q96QZ7 1491 aaPredicted RBP30.36■■■□□ 2.45
TSC2-214ENST00000488675 FGD5Q6ZNL6 1462 aa30.34■■■□□ 2.45
TSC2-214ENST00000488675 GRIN2BQ13224 1484 aa30.3■■■□□ 2.44
TSC2-214ENST00000488675 PPP4R3CPQ6ZMV5 832 aa30.29■■■□□ 2.44
TSC2-214ENST00000488675 SYNJ2O15056 1496 aa30.27■■■□□ 2.44
TSC2-214ENST00000488675 CUX1P39880 1505 aa30.21■■■□□ 2.43
TSC2-214ENST00000488675 GAPVD1Q14C86 1478 aa30.19■■■□□ 2.42
TSC2-214ENST00000488675 PBRM1Q86U86 1689 aa30.04■■■□□ 2.4
TSC2-214ENST00000488675 ABCA10Q8WWZ4 1543 aa29.98■■■□□ 2.39
TSC2-214ENST00000488675 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
TSC2-214ENST00000488675 KCNA4P22459 653 aa29.93■■■□□ 2.38
TSC2-214ENST00000488675 ERCC6L2Q5T890 1561 aa29.92■■■□□ 2.38
TSC2-214ENST00000488675 GRIN2AQ12879 1464 aa29.9■■■□□ 2.38
TSC2-214ENST00000488675 SCAF1Q9H7N4 1312 aaKnown RBP29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms