RNA–Protein interactions for RNA: ENST00000488573.1

ESR1-213, Transcript of estrogen receptor 1, humanhuman

TSL 3

Gene ESR1, Length 530 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1-213ENST00000488573 NISCHQ9Y2I1 1504 aa38.46■■■■□ 3.75
ESR1-213ENST00000488573 ABCC9O60706 1549 aa35.07■■■■□ 3.21
ESR1-213ENST00000488573 CCDC180Q9P1Z9 1646 aa34.64■■■■□ 3.14
ESR1-213ENST00000488573 RB1CC1Q8TDY2 1594 aa33.26■■■□□ 2.91
ESR1-213ENST00000488573 DNAJC5BQ9UF47 199 aa33.24■■■□□ 2.91
ESR1-213ENST00000488573 NACADO15069 1562 aa32.94■■■□□ 2.86
ESR1-213ENST00000488573 DCAF8L2P0C7V8 631 aa32.86■■■□□ 2.85
ESR1-213ENST00000488573 PABPN1Q86U42 306 aaKnown RBP eCLIP32.66■■■□□ 2.82
ESR1-213ENST00000488573 MYO15BQ96JP2 1530 aa32.35■■■□□ 2.77
ESR1-213ENST00000488573 UNC13AQ9UPW8 1703 aa32.29■■■□□ 2.76
ESR1-213ENST00000488573 BICRAQ9NZM4 1560 aa32.15■■■□□ 2.74
ESR1-213ENST00000488573 SHROOM4Q9ULL8 1493 aa31.84■■■□□ 2.69
ESR1-213ENST00000488573 DCAF1Q9Y4B6 1507 aa31.76■■■□□ 2.68
ESR1-213ENST00000488573 ZCCHC6Q5VYS8 1495 aaKnown RBP31.73■■■□□ 2.67
ESR1-213ENST00000488573 CECR2Q9BXF3 1484 aa31.68■■■□□ 2.66
ESR1-213ENST00000488573 CC2D2AQ9P2K1 1620 aa31.64■■■□□ 2.65
ESR1-213ENST00000488573 SCRIBQ14160 1630 aa31.52■■■□□ 2.64
ESR1-213ENST00000488573 EIF4G1Q04637 1599 aaKnown RBP31.47■■■□□ 2.63
ESR1-213ENST00000488573 DNAJC5Q9H3Z4 198 aa30.96■■■□□ 2.55
ESR1-213ENST00000488573 CUX2O14529 1486 aa30.45■■■□□ 2.47
ESR1-213ENST00000488573 NCAPD3P42695 1498 aa30.42■■■□□ 2.46
ESR1-213ENST00000488573 ERCC6Q03468 1493 aa30.41■■■□□ 2.46
ESR1-213ENST00000488573 ATAD2BQ9ULI0 1458 aa30.23■■■□□ 2.43
ESR1-213ENST00000488573 SMARCA2P51531 1590 aa30.16■■■□□ 2.42
ESR1-213ENST00000488573 HMGXB3Q12766 1538 aa30.09■■■□□ 2.41
ESR1-213ENST00000488573 SMARCA4P51532 1647 aa30.04■■■□□ 2.4
ESR1-213ENST00000488573 NESP48681 1621 aa29.96■■■□□ 2.39
ESR1-213ENST00000488573 BAZ1BQ9UIG0 1483 aaKnown RBP29.95■■■□□ 2.39
ESR1-213ENST00000488573 BAZ1AQ9NRL2 1556 aaPredicted RBP29.91■■■□□ 2.38
ESR1-213ENST00000488573 LAMC3Q9Y6N6 1575 aa29.77■■■□□ 2.36
ESR1-213ENST00000488573 PEG3Q9GZU2 1588 aa29.77■■■□□ 2.36
ESR1-213ENST00000488573 PDS5BQ9NTI5 1447 aa29.72■■■□□ 2.35
ESR1-213ENST00000488573 THOC2Q8NI27 1593 aaKnown RBP29.69■■■□□ 2.34
ESR1-213ENST00000488573 MROH2BQ7Z745 1585 aa29.57■■■□□ 2.32
ESR1-213ENST00000488573 KIF21AQ7Z4S6 1674 aa29.52■■■□□ 2.32
ESR1-213ENST00000488573 CADPSQ9ULU8 1353 aa29.52■■■□□ 2.32
ESR1-213ENST00000488573 TRIM41Q8WV44 630 aa29.45■■■□□ 2.31
ESR1-213ENST00000488573 MRC2Q9UBG0 1479 aa29.39■■■□□ 2.3
ESR1-213ENST00000488573 WDR62O43379 1518 aa29.28■■■□□ 2.28
ESR1-213ENST00000488573 CEP164Q9UPV0 1460 aa29.21■■■□□ 2.27
ESR1-213ENST00000488573 WIZO95785 1651 aa29.18■■■□□ 2.26
ESR1-213ENST00000488573 OSCARQ8IYS5 282 aa29.14■■■□□ 2.26
ESR1-213ENST00000488573 FANCD2Q9BXW9 1451 aa29.12■■■□□ 2.25
ESR1-213ENST00000488573 CFTRP13569 1480 aa29.04■■■□□ 2.24
ESR1-213ENST00000488573 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
ESR1-213ENST00000488573 TOP2AP11388 1531 aaKnown RBP28.83■■■□□ 2.21
ESR1-213ENST00000488573 URB2Q14146 1524 aaKnown RBP28.83■■■□□ 2.21
ESR1-213ENST00000488573 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
ESR1-213ENST00000488573 PRDM2Q13029 1718 aa28.59■■■□□ 2.17
ESR1-213ENST00000488573 RIMBP3CA6NJZ7 1639 aa28.56■■■□□ 2.16
ESR1-213ENST00000488573 RIMBP3BA6NNM3 1639 aa28.56■■■□□ 2.16
ESR1-213ENST00000488573 RIMBP3Q9UFD9 1639 aa28.56■■■□□ 2.16
ESR1-213ENST00000488573 ABCC8Q09428 1581 aa28.55■■■□□ 2.16
ESR1-213ENST00000488573 ZNF608Q9ULD9 1512 aaPredicted RBP28.54■■■□□ 2.16
ESR1-213ENST00000488573 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
ESR1-213ENST00000488573 TOPBP1Q92547 1522 aa28.49■■■□□ 2.15
ESR1-213ENST00000488573 ARHGEF11O15085 1522 aa28.47■■■□□ 2.15
ESR1-213ENST00000488573 CYB5RLQ6IPT4 315 aa28.44■■■□□ 2.14
ESR1-213ENST00000488573 FBLN2P98095 1184 aa28.36■■■□□ 2.13
ESR1-213ENST00000488573 DNMBPQ6XZF7 1577 aa28.35■■■□□ 2.13
ESR1-213ENST00000488573 EIF4G3O43432 1585 aaKnown RBP28.34■■■□□ 2.13
ESR1-213ENST00000488573 TRHP20396 242 aaPredicted RBP28.32■■■□□ 2.12
ESR1-213ENST00000488573 AQRO60306 1485 aaKnown RBP eCLIP28.31■■■□□ 2.12
ESR1-213ENST00000488573 TARBP1Q13395 1621 aaKnown RBP28.21■■■□□ 2.11
ESR1-213ENST00000488573 CHD1O14646 1710 aa28.18■■■□□ 2.1
ESR1-213ENST00000488573 POLA1P09884 1462 aaPredicted RBP28.17■■■□□ 2.1
ESR1-213ENST00000488573 SOGA1O94964 1423 aa28.14■■■□□ 2.1
ESR1-213ENST00000488573 ARAP1Q96P48 1450 aa28.13■■■□□ 2.09
ESR1-213ENST00000488573 TDRD9Q8NDG6 1382 aaKnown RBP28.1■■■□□ 2.09
ESR1-213ENST00000488573 CHMP7Q8WUX9 453 aaPredicted RBP28.09■■■□□ 2.09
ESR1-213ENST00000488573 RAD54L2Q9Y4B4 1467 aa28.08■■■□□ 2.09
ESR1-213ENST00000488573 WDR97A6NE52 1622 aa28■■■□□ 2.07
ESR1-213ENST00000488573 SNAPC4Q5SXM2 1469 aa27.97■■■□□ 2.07
ESR1-213ENST00000488573 FGD5Q6ZNL6 1462 aa27.95■■■□□ 2.06
ESR1-213ENST00000488573 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.06
ESR1-213ENST00000488573 SYNJ1O43426 1573 aa27.94■■■□□ 2.06
ESR1-213ENST00000488573 GRIN2BQ13224 1484 aa27.91■■■□□ 2.06
ESR1-213ENST00000488573 CLASP1Q7Z460 1538 aa27.88■■■□□ 2.05
ESR1-213ENST00000488573 SYNJ2O15056 1496 aa27.85■■■□□ 2.05
ESR1-213ENST00000488573 AEBP2Q6ZN18 517 aaPredicted RBP27.85■■■□□ 2.05
ESR1-213ENST00000488573 CUX1P39880 1505 aa27.81■■■□□ 2.04
ESR1-213ENST00000488573 GAPVD1Q14C86 1478 aa27.76■■■□□ 2.03
ESR1-213ENST00000488573 SUPT5HO00267 1087 aaKnown RBP27.73■■■□□ 2.03
ESR1-213ENST00000488573 PBRM1Q86U86 1689 aa27.63■■■□□ 2.01
ESR1-213ENST00000488573 ABCA10Q8WWZ4 1543 aa27.62■■■□□ 2.01
ESR1-213ENST00000488573 ABCA5Q8WWZ7 1642 aa27.53■■■□□ 2
ESR1-213ENST00000488573 WRNQ14191 1432 aaPredicted RBP eCLIP27.53■■■□□ 2
ESR1-213ENST00000488573 GRIN2AQ12879 1464 aa27.51■■■□□ 2
ESR1-213ENST00000488573 NUP160Q12769 1436 aa27.42■■□□□ 1.98
ESR1-213ENST00000488573 FHAD1B1AJZ9 1412 aa27.41■■□□□ 1.98
ESR1-213ENST00000488573 CEP170Q5SW79 1584 aa27.39■■□□□ 1.97
ESR1-213ENST00000488573 ERCC6L2Q5T890 1561 aa27.37■■□□□ 1.97
ESR1-213ENST00000488573 ADAMTS12P58397 1594 aa27.36■■□□□ 1.97
ESR1-213ENST00000488573 ERICH3Q5RHP9 1530 aa27.29■■□□□ 1.96
ESR1-213ENST00000488573 TOP2BQ02880 1626 aa27.28■■□□□ 1.96
ESR1-213ENST00000488573 SHROOM2Q13796 1616 aa27.28■■□□□ 1.96
ESR1-213ENST00000488573 NPM1P06748 294 aaKnown RBP eCLIP27.28■■□□□ 1.96
ESR1-213ENST00000488573 JPH4Q96JJ6 628 aa27.28■■□□□ 1.96
ESR1-213ENST00000488573 PRG4Q92954 1404 aaPredicted RBP27.25■■□□□ 1.95
ESR1-213ENST00000488573 BIVM-ERCC5R4GMW8 1640 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms