RNA–Protein interactions for RNA: ENST00000488562.1

SORBS2-256, Transcript of sorbin and SH3 domain containing 2, human

TSL 4

Gene SORBS2, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS2-256	ENST00000488562	NISCH	Q9Y2I1	1504 aa		15.06	■□□□□ 0
SORBS2-256	ENST00000488562	AEBP2	Q6ZN18	517 aa	Predicted RBP	14.57	□□□□□ -0.08
SORBS2-256	ENST00000488562	CHIC1	Q5VXU3	224 aa		13.67	□□□□□ -0.22
SORBS2-256	ENST00000488562	CCDC180	Q9P1Z9	1646 aa		13.58	□□□□□ -0.24
SORBS2-256	ENST00000488562	ABCC9	O60706	1549 aa		13.41	□□□□□ -0.26
SORBS2-256	ENST00000488562	RB1CC1	Q8TDY2	1594 aa		12.81	□□□□□ -0.36
SORBS2-256	ENST00000488562	NACAD	O15069	1562 aa		12.74	□□□□□ -0.37
SORBS2-256	ENST00000488562	UNC13A	Q9UPW8	1703 aa		12.71	□□□□□ -0.37
SORBS2-256	ENST00000488562	MYO15B	Q96JP2	1530 aa		12.62	□□□□□ -0.39
SORBS2-256	ENST00000488562	SENP3	Q9H4L4	574 aa	Predicted RBP	12.56	□□□□□ -0.4
SORBS2-256	ENST00000488562	DNAJC5B	Q9UF47	199 aa		12.55	□□□□□ -0.4
SORBS2-256	ENST00000488562	BICRA	Q9NZM4	1560 aa		12.54	□□□□□ -0.4
SORBS2-256	ENST00000488562	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.53	□□□□□ -0.4
SORBS2-256	ENST00000488562	DCAF1	Q9Y4B6	1507 aa		12.47	□□□□□ -0.41
SORBS2-256	ENST00000488562	DCAF8L2	P0C7V8	631 aa		12.42	□□□□□ -0.42
SORBS2-256	ENST00000488562	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.41	□□□□□ -0.42
SORBS2-256	ENST00000488562	SCRIB	Q14160	1630 aa		12.31	□□□□□ -0.44
SORBS2-256	ENST00000488562	SHROOM4	Q9ULL8	1493 aa		12.3	□□□□□ -0.44
SORBS2-256	ENST00000488562	PHF23	Q9BUL5	403 aa	Predicted RBP	12.29	□□□□□ -0.44
SORBS2-256	ENST00000488562	CC2D2A	Q9P2K1	1620 aa		12.19	□□□□□ -0.46
SORBS2-256	ENST00000488562	EIF4G1	Q04637	1599 aa	Known RBP	12.17	□□□□□ -0.46
SORBS2-256	ENST00000488562	CECR2	Q9BXF3	1484 aa		12.08	□□□□□ -0.48
SORBS2-256	ENST00000488562	SMARCA4	P51532	1647 aa		11.78	□□□□□ -0.52
SORBS2-256	ENST00000488562	NCAPD3	P42695	1498 aa		11.75	□□□□□ -0.53
SORBS2-256	ENST00000488562	ATAD2B	Q9ULI0	1458 aa		11.73	□□□□□ -0.53
SORBS2-256	ENST00000488562	HMGXB3	Q12766	1538 aa		11.72	□□□□□ -0.53
SORBS2-256	ENST00000488562	FOXD1	Q16676	465 aa		11.72	□□□□□ -0.53
SORBS2-256	ENST00000488562	POTED	Q86YR6	584 aa		11.69	□□□□□ -0.54
SORBS2-256	ENST00000488562	SMARCA2	P51531	1590 aa		11.69	□□□□□ -0.54
SORBS2-256	ENST00000488562	PEG3	Q9GZU2	1588 aa		11.69	□□□□□ -0.54
SORBS2-256	ENST00000488562	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.67	□□□□□ -0.54
SORBS2-256	ENST00000488562	MROH2B	Q7Z745	1585 aa		11.62	□□□□□ -0.55
SORBS2-256	ENST00000488562	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.58	□□□□□ -0.56
SORBS2-256	ENST00000488562	NES	P48681	1621 aa		11.57	□□□□□ -0.56
SORBS2-256	ENST00000488562	CUX2	O14529	1486 aa		11.55	□□□□□ -0.56
SORBS2-256	ENST00000488562	THOC2	Q8NI27	1593 aa	Known RBP	11.54	□□□□□ -0.56
SORBS2-256	ENST00000488562	KIF21A	Q7Z4S6	1674 aa		11.51	□□□□□ -0.57
SORBS2-256	ENST00000488562	ERCC6	Q03468	1493 aa		11.51	□□□□□ -0.57
SORBS2-256	ENST00000488562	WIZ	O95785	1651 aa		11.5	□□□□□ -0.57
SORBS2-256	ENST00000488562	LAMC3	Q9Y6N6	1575 aa		11.5	□□□□□ -0.57
SORBS2-256	ENST00000488562	DNAJC5	Q9H3Z4	198 aa		11.42	□□□□□ -0.58
SORBS2-256	ENST00000488562	RSF1	Q96T23	1441 aa	Predicted RBP	11.35	□□□□□ -0.59
SORBS2-256	ENST00000488562	TOP2A	P11388	1531 aa	Known RBP	11.35	□□□□□ -0.59
SORBS2-256	ENST00000488562	CADPS	Q9ULU8	1353 aa		11.34	□□□□□ -0.59
SORBS2-256	ENST00000488562	WDR62	O43379	1518 aa		11.34	□□□□□ -0.59
SORBS2-256	ENST00000488562	PDS5B	Q9NTI5	1447 aa		11.33	□□□□□ -0.6
SORBS2-256	ENST00000488562	PRDM2	Q13029	1718 aa		11.32	□□□□□ -0.6
SORBS2-256	ENST00000488562	MRC2	Q9UBG0	1479 aa		11.31	□□□□□ -0.6
SORBS2-256	ENST00000488562	CFTR	P13569	1480 aa		11.28	□□□□□ -0.6
SORBS2-256	ENST00000488562	FANCD2	Q9BXW9	1451 aa		11.25	□□□□□ -0.61
SORBS2-256	ENST00000488562	CEP164	Q9UPV0	1460 aa		11.25	□□□□□ -0.61
SORBS2-256	ENST00000488562	URB2	Q14146	1524 aa	Known RBP	11.2	□□□□□ -0.62
SORBS2-256	ENST00000488562	MSH5	O43196	834 aa		11.2	□□□□□ -0.62
SORBS2-256	ENST00000488562	CCDC88B	A6NC98	1476 aa		11.17	□□□□□ -0.62
SORBS2-256	ENST00000488562	TOPBP1	Q92547	1522 aa		11.07	□□□□□ -0.64
SORBS2-256	ENST00000488562	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.05	□□□□□ -0.64
SORBS2-256	ENST00000488562	DNMBP	Q6XZF7	1577 aa		11.05	□□□□□ -0.64
SORBS2-256	ENST00000488562	TARBP1	Q13395	1621 aa	Known RBP	11.04	□□□□□ -0.64
SORBS2-256	ENST00000488562	EIF4G3	O43432	1585 aa	Known RBP	11.03	□□□□□ -0.64
SORBS2-256	ENST00000488562	IFT140	Q96RY7	1462 aa		11.02	□□□□□ -0.65
SORBS2-256	ENST00000488562	CHD1	O14646	1710 aa		10.98	□□□□□ -0.65
SORBS2-256	ENST00000488562	POLA1	P09884	1462 aa	Predicted RBP	10.97	□□□□□ -0.65
SORBS2-256	ENST00000488562	ABCC8	Q09428	1581 aa		10.97	□□□□□ -0.65
SORBS2-256	ENST00000488562	WDR97	A6NE52	1622 aa		10.95	□□□□□ -0.66
SORBS2-256	ENST00000488562	RIMBP3C	A6NJZ7	1639 aa		10.94	□□□□□ -0.66
SORBS2-256	ENST00000488562	RIMBP3B	A6NNM3	1639 aa		10.94	□□□□□ -0.66
SORBS2-256	ENST00000488562	RIMBP3	Q9UFD9	1639 aa		10.94	□□□□□ -0.66
SORBS2-256	ENST00000488562	CUX1	P39880	1505 aa		10.92	□□□□□ -0.66
SORBS2-256	ENST00000488562	AQR	O60306	1485 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
SORBS2-256	ENST00000488562	RAD54L2	Q9Y4B4	1467 aa		10.89	□□□□□ -0.67
SORBS2-256	ENST00000488562	ARHGEF11	O15085	1522 aa		10.89	□□□□□ -0.67
SORBS2-256	ENST00000488562	FGD5	Q6ZNL6	1462 aa		10.88	□□□□□ -0.67
SORBS2-256	ENST00000488562	OSCAR	Q8IYS5	282 aa		10.88	□□□□□ -0.67
SORBS2-256	ENST00000488562	PIAS4	Q8N2W9	510 aa	Predicted RBP	10.86	□□□□□ -0.67
SORBS2-256	ENST00000488562	TRIM41	Q8WV44	630 aa		10.86	□□□□□ -0.67
SORBS2-256	ENST00000488562	PBRM1	Q86U86	1689 aa		10.85	□□□□□ -0.67
SORBS2-256	ENST00000488562	ABCA5	Q8WWZ7	1642 aa		10.84	□□□□□ -0.67
SORBS2-256	ENST00000488562	CLASP1	Q7Z460	1538 aa		10.83	□□□□□ -0.68
SORBS2-256	ENST00000488562	SOGA1	O94964	1423 aa		10.82	□□□□□ -0.68
SORBS2-256	ENST00000488562	SNAPC4	Q5SXM2	1469 aa		10.81	□□□□□ -0.68
SORBS2-256	ENST00000488562	TDRD9	Q8NDG6	1382 aa	Known RBP	10.8	□□□□□ -0.68
SORBS2-256	ENST00000488562	ARAP1	Q96P48	1450 aa		10.8	□□□□□ -0.68
SORBS2-256	ENST00000488562	BIVM-ERCC5	R4GMW8	1640 aa		10.8	□□□□□ -0.68
SORBS2-256	ENST00000488562	MAGI1	Q96QZ7	1491 aa	Predicted RBP	10.79	□□□□□ -0.68
SORBS2-256	ENST00000488562	ABCA10	Q8WWZ4	1543 aa		10.78	□□□□□ -0.68
SORBS2-256	ENST00000488562	SYNJ1	O43426	1573 aa		10.77	□□□□□ -0.68
SORBS2-256	ENST00000488562	GRIN2B	Q13224	1484 aa		10.76	□□□□□ -0.69
SORBS2-256	ENST00000488562	TOP2B	Q02880	1626 aa		10.76	□□□□□ -0.69
SORBS2-256	ENST00000488562	SYNJ2	O15056	1496 aa		10.74	□□□□□ -0.69
SORBS2-256	ENST00000488562	GAPVD1	Q14C86	1478 aa		10.73	□□□□□ -0.69
SORBS2-256	ENST00000488562	ADAMTS12	P58397	1594 aa		10.73	□□□□□ -0.69
SORBS2-256	ENST00000488562	SUPT5H	O00267	1087 aa	Known RBP	10.7	□□□□□ -0.7
SORBS2-256	ENST00000488562	CEP170	Q5SW79	1584 aa		10.67	□□□□□ -0.7
SORBS2-256	ENST00000488562	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.67	□□□□□ -0.7
SORBS2-256	ENST00000488562	SHROOM2	Q13796	1616 aa		10.66	□□□□□ -0.7
SORBS2-256	ENST00000488562	ERCC6L2	Q5T890	1561 aa		10.66	□□□□□ -0.7
SORBS2-256	ENST00000488562	FBLN2	P98095	1184 aa		10.66	□□□□□ -0.7
SORBS2-256	ENST00000488562	GRIN2A	Q12879	1464 aa		10.66	□□□□□ -0.7
SORBS2-256	ENST00000488562	NUP160	Q12769	1436 aa		10.64	□□□□□ -0.71
SORBS2-256	ENST00000488562	ERICH3	Q5RHP9	1530 aa		10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms