RNA–Protein interactions for RNA: ENST00000488495.1

SLC52A3-204, Transcript of solute carrier family 52 member 3, humanhuman

TSL 3

Gene SLC52A3, Length 571 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3-204ENST00000488495 NISCHQ9Y2I1 1504 aa22.03■■□□□ 1.12
SLC52A3-204ENST00000488495 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
SLC52A3-204ENST00000488495 ABCC9O60706 1549 aa19.3■□□□□ 0.68
SLC52A3-204ENST00000488495 ZCCHC6Q5VYS8 1495 aaKnown RBP18.58■□□□□ 0.56
SLC52A3-204ENST00000488495 DCAF8L2P0C7V8 631 aa18.44■□□□□ 0.54
SLC52A3-204ENST00000488495 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
SLC52A3-204ENST00000488495 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
SLC52A3-204ENST00000488495 NACADO15069 1562 aa18.18■□□□□ 0.5
SLC52A3-204ENST00000488495 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
SLC52A3-204ENST00000488495 MYO15BQ96JP2 1530 aa18.1■□□□□ 0.49
SLC52A3-204ENST00000488495 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
SLC52A3-204ENST00000488495 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
SLC52A3-204ENST00000488495 SHROOM4Q9ULL8 1493 aa17.74■□□□□ 0.43
SLC52A3-204ENST00000488495 UNC13AQ9UPW8 1703 aa17.73■□□□□ 0.43
SLC52A3-204ENST00000488495 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
SLC52A3-204ENST00000488495 EIF4G1Q04637 1599 aaKnown RBP17.34■□□□□ 0.37
SLC52A3-204ENST00000488495 CECR2Q9BXF3 1484 aa17.32■□□□□ 0.36
SLC52A3-204ENST00000488495 CC2D2AQ9P2K1 1620 aa17.32■□□□□ 0.36
SLC52A3-204ENST00000488495 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
SLC52A3-204ENST00000488495 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
SLC52A3-204ENST00000488495 RSF1Q96T23 1441 aaPredicted RBP17■□□□□ 0.31
SLC52A3-204ENST00000488495 MROH2BQ7Z745 1585 aa16.99■□□□□ 0.31
SLC52A3-204ENST00000488495 SUPT5HO00267 1087 aaKnown RBP16.97■□□□□ 0.31
SLC52A3-204ENST00000488495 WIZO95785 1651 aa16.94■□□□□ 0.3
SLC52A3-204ENST00000488495 ATAD2BQ9ULI0 1458 aa16.89■□□□□ 0.29
SLC52A3-204ENST00000488495 NCAPD3P42695 1498 aa16.87■□□□□ 0.29
SLC52A3-204ENST00000488495 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
SLC52A3-204ENST00000488495 TOP2AP11388 1531 aaKnown RBP16.79■□□□□ 0.28
SLC52A3-204ENST00000488495 SMARCA2P51531 1590 aa16.74■□□□□ 0.27
SLC52A3-204ENST00000488495 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
SLC52A3-204ENST00000488495 HMGXB3Q12766 1538 aa16.69■□□□□ 0.26
SLC52A3-204ENST00000488495 NESP48681 1621 aa16.65■□□□□ 0.26
SLC52A3-204ENST00000488495 ERCC6Q03468 1493 aa16.6■□□□□ 0.25
SLC52A3-204ENST00000488495 CCDC88BA6NC98 1476 aa16.46■□□□□ 0.23
SLC52A3-204ENST00000488495 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
SLC52A3-204ENST00000488495 CADPSQ9ULU8 1353 aa16.41■□□□□ 0.22
SLC52A3-204ENST00000488495 CUX2O14529 1486 aa16.41■□□□□ 0.22
SLC52A3-204ENST00000488495 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
SLC52A3-204ENST00000488495 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
SLC52A3-204ENST00000488495 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
SLC52A3-204ENST00000488495 DNAJC5Q9H3Z4 198 aa16.29■□□□□ 0.2
SLC52A3-204ENST00000488495 THOC2Q8NI27 1593 aaKnown RBP16.29■□□□□ 0.2
SLC52A3-204ENST00000488495 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
SLC52A3-204ENST00000488495 CFTRP13569 1480 aa16.23■□□□□ 0.19
SLC52A3-204ENST00000488495 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
SLC52A3-204ENST00000488495 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
SLC52A3-204ENST00000488495 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
SLC52A3-204ENST00000488495 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
SLC52A3-204ENST00000488495 WDR62O43379 1518 aa16.13■□□□□ 0.17
SLC52A3-204ENST00000488495 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
SLC52A3-204ENST00000488495 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
SLC52A3-204ENST00000488495 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
SLC52A3-204ENST00000488495 TOP2BQ02880 1626 aa16.05■□□□□ 0.16
SLC52A3-204ENST00000488495 WRNQ14191 1432 aaPredicted RBP eCLIP16.02■□□□□ 0.15
SLC52A3-204ENST00000488495 TRIM41Q8WV44 630 aa16■□□□□ 0.15
SLC52A3-204ENST00000488495 CUX1P39880 1505 aa15.94■□□□□ 0.14
SLC52A3-204ENST00000488495 TOPBP1Q92547 1522 aa15.92■□□□□ 0.14
SLC52A3-204ENST00000488495 ZNF608Q9ULD9 1512 aaPredicted RBP15.91■□□□□ 0.14
SLC52A3-204ENST00000488495 EEA1Q15075 1411 aa15.86■□□□□ 0.13
SLC52A3-204ENST00000488495 IFT140Q96RY7 1462 aa15.85■□□□□ 0.13
SLC52A3-204ENST00000488495 DNMBPQ6XZF7 1577 aa15.85■□□□□ 0.13
SLC52A3-204ENST00000488495 RAD54L2Q9Y4B4 1467 aa15.81■□□□□ 0.12
SLC52A3-204ENST00000488495 WDR97A6NE52 1622 aa15.8■□□□□ 0.12
SLC52A3-204ENST00000488495 AQRO60306 1485 aaKnown RBP eCLIP15.8■□□□□ 0.12
SLC52A3-204ENST00000488495 KIF21BO75037 1637 aa15.79■□□□□ 0.12
SLC52A3-204ENST00000488495 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
SLC52A3-204ENST00000488495 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
SLC52A3-204ENST00000488495 SOGA1O94964 1423 aa15.76■□□□□ 0.11
SLC52A3-204ENST00000488495 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
SLC52A3-204ENST00000488495 FGD5Q6ZNL6 1462 aa15.72■□□□□ 0.11
SLC52A3-204ENST00000488495 RUSC2Q8N2Y8 1516 aa15.71■□□□□ 0.11
SLC52A3-204ENST00000488495 TARBP1Q13395 1621 aaKnown RBP15.7■□□□□ 0.1
SLC52A3-204ENST00000488495 FBLN2P98095 1184 aa15.7■□□□□ 0.1
SLC52A3-204ENST00000488495 EIF4G3O43432 1585 aaKnown RBP15.7■□□□□ 0.1
SLC52A3-204ENST00000488495 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
SLC52A3-204ENST00000488495 GOLGA3Q08378 1498 aa15.64■□□□□ 0.09
SLC52A3-204ENST00000488495 FAM9AQ8IZU1 332 aaPredicted RBP15.63■□□□□ 0.09
SLC52A3-204ENST00000488495 ABCA5Q8WWZ7 1642 aa15.61■□□□□ 0.09
SLC52A3-204ENST00000488495 ABCA10Q8WWZ4 1543 aa15.61■□□□□ 0.09
SLC52A3-204ENST00000488495 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
SLC52A3-204ENST00000488495 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
SLC52A3-204ENST00000488495 LOC105371045A0A1W2PR82 267 aa15.59■□□□□ 0.09
SLC52A3-204ENST00000488495 CUL7Q14999 1698 aa15.59■□□□□ 0.09
SLC52A3-204ENST00000488495 PBRM1Q86U86 1689 aa15.58■□□□□ 0.08
SLC52A3-204ENST00000488495 CHMP7Q8WUX9 453 aaPredicted RBP15.55■□□□□ 0.08
SLC52A3-204ENST00000488495 PRXQ9BXM0 1461 aa15.54■□□□□ 0.08
SLC52A3-204ENST00000488495 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
SLC52A3-204ENST00000488495 GRIN2BQ13224 1484 aa15.53■□□□□ 0.08
SLC52A3-204ENST00000488495 GAPVD1Q14C86 1478 aa15.52■□□□□ 0.07
SLC52A3-204ENST00000488495 ARHGEF11O15085 1522 aa15.51■□□□□ 0.07
SLC52A3-204ENST00000488495 CTTNBP2Q8WZ74 1663 aa15.51■□□□□ 0.07
SLC52A3-204ENST00000488495 TNIKQ9UKE5 1360 aa15.5■□□□□ 0.07
SLC52A3-204ENST00000488495 RAPGEF2Q9Y4G8 1499 aa15.49■□□□□ 0.07
SLC52A3-204ENST00000488495 CYB5RLQ6IPT4 315 aa15.49■□□□□ 0.07
SLC52A3-204ENST00000488495 RIMBP3CA6NJZ7 1639 aa15.48■□□□□ 0.07
SLC52A3-204ENST00000488495 RIMBP3BA6NNM3 1639 aa15.48■□□□□ 0.07
SLC52A3-204ENST00000488495 RIMBP3Q9UFD9 1639 aa15.48■□□□□ 0.07
SLC52A3-204ENST00000488495 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.07
SLC52A3-204ENST00000488495 CHD1O14646 1710 aa15.46■□□□□ 0.06
SLC52A3-204ENST00000488495 CEP162Q5TB80 1403 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms