RNA–Protein interactions for RNA: ENST00000488359.1

WIPI2-213, Transcript of WD repeat domain, phosphoinositide interacting 2, humanhuman

TSL 3

Gene WIPI2, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2-213ENST00000488359 NISCHQ9Y2I1 1504 aa22.24■■□□□ 1.15
WIPI2-213ENST00000488359 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
WIPI2-213ENST00000488359 AEBP2Q6ZN18 517 aaPredicted RBP19.66■□□□□ 0.74
WIPI2-213ENST00000488359 ABCC9O60706 1549 aa19.62■□□□□ 0.73
WIPI2-213ENST00000488359 RB1CC1Q8TDY2 1594 aa18.77■□□□□ 0.6
WIPI2-213ENST00000488359 DCAF8L2P0C7V8 631 aa18.72■□□□□ 0.59
WIPI2-213ENST00000488359 NACADO15069 1562 aa18.72■□□□□ 0.59
WIPI2-213ENST00000488359 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
WIPI2-213ENST00000488359 MYO15BQ96JP2 1530 aa18.56■□□□□ 0.56
WIPI2-213ENST00000488359 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.54
WIPI2-213ENST00000488359 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.54
WIPI2-213ENST00000488359 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
WIPI2-213ENST00000488359 DNAJC5BQ9UF47 199 aa18.26■□□□□ 0.51
WIPI2-213ENST00000488359 UNC13AQ9UPW8 1703 aa18.25■□□□□ 0.51
WIPI2-213ENST00000488359 BICRAQ9NZM4 1560 aa18.21■□□□□ 0.51
WIPI2-213ENST00000488359 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
WIPI2-213ENST00000488359 SHROOM4Q9ULL8 1493 aa18.02■□□□□ 0.48
WIPI2-213ENST00000488359 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
WIPI2-213ENST00000488359 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
WIPI2-213ENST00000488359 CECR2Q9BXF3 1484 aa17.68■□□□□ 0.42
WIPI2-213ENST00000488359 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
WIPI2-213ENST00000488359 ATAD2BQ9ULI0 1458 aa17.27■□□□□ 0.36
WIPI2-213ENST00000488359 SMARCA4P51532 1647 aa17.26■□□□□ 0.35
WIPI2-213ENST00000488359 BAZ1AQ9NRL2 1556 aaPredicted RBP17.23■□□□□ 0.35
WIPI2-213ENST00000488359 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
WIPI2-213ENST00000488359 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
WIPI2-213ENST00000488359 MROH2BQ7Z745 1585 aa17.12■□□□□ 0.33
WIPI2-213ENST00000488359 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
WIPI2-213ENST00000488359 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
WIPI2-213ENST00000488359 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
WIPI2-213ENST00000488359 NESP48681 1621 aa16.91■□□□□ 0.3
WIPI2-213ENST00000488359 WIZO95785 1651 aa16.89■□□□□ 0.29
WIPI2-213ENST00000488359 RSF1Q96T23 1441 aaPredicted RBP16.88■□□□□ 0.29
WIPI2-213ENST00000488359 SENP3Q9H4L4 574 aaPredicted RBP16.84■□□□□ 0.29
WIPI2-213ENST00000488359 CUX2O14529 1486 aa16.84■□□□□ 0.29
WIPI2-213ENST00000488359 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
WIPI2-213ENST00000488359 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
WIPI2-213ENST00000488359 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
WIPI2-213ENST00000488359 TOP2AP11388 1531 aaKnown RBP16.72■□□□□ 0.27
WIPI2-213ENST00000488359 THOC2Q8NI27 1593 aaKnown RBP16.66■□□□□ 0.26
WIPI2-213ENST00000488359 CFTRP13569 1480 aa16.64■□□□□ 0.25
WIPI2-213ENST00000488359 KIF21AQ7Z4S6 1674 aa16.64■□□□□ 0.25
WIPI2-213ENST00000488359 DNAJC5Q9H3Z4 198 aa16.63■□□□□ 0.25
WIPI2-213ENST00000488359 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
WIPI2-213ENST00000488359 CCDC88BA6NC98 1476 aa16.57■□□□□ 0.24
WIPI2-213ENST00000488359 FANCD2Q9BXW9 1451 aa16.57■□□□□ 0.24
WIPI2-213ENST00000488359 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
WIPI2-213ENST00000488359 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
WIPI2-213ENST00000488359 WDR62O43379 1518 aa16.52■□□□□ 0.24
WIPI2-213ENST00000488359 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
WIPI2-213ENST00000488359 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
WIPI2-213ENST00000488359 SUPT5HO00267 1087 aaKnown RBP16.32■□□□□ 0.2
WIPI2-213ENST00000488359 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
WIPI2-213ENST00000488359 TOPBP1Q92547 1522 aa16.28■□□□□ 0.2
WIPI2-213ENST00000488359 IFT140Q96RY7 1462 aa16.24■□□□□ 0.19
WIPI2-213ENST00000488359 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
WIPI2-213ENST00000488359 ZNF608Q9ULD9 1512 aaPredicted RBP16.18■□□□□ 0.18
WIPI2-213ENST00000488359 OSCARQ8IYS5 282 aa16.17■□□□□ 0.18
WIPI2-213ENST00000488359 POLA1P09884 1462 aaPredicted RBP16.13■□□□□ 0.17
WIPI2-213ENST00000488359 SOGA1O94964 1423 aa16.1■□□□□ 0.17
WIPI2-213ENST00000488359 TARBP1Q13395 1621 aaKnown RBP16.09■□□□□ 0.17
WIPI2-213ENST00000488359 AQRO60306 1485 aaKnown RBP eCLIP16.08■□□□□ 0.164e-6■■■■■ 31
WIPI2-213ENST00000488359 RAD54L2Q9Y4B4 1467 aa16.07■□□□□ 0.16
WIPI2-213ENST00000488359 CUX1P39880 1505 aa16.07■□□□□ 0.16
WIPI2-213ENST00000488359 EIF4G3O43432 1585 aaKnown RBP16.05■□□□□ 0.16
WIPI2-213ENST00000488359 FGD5Q6ZNL6 1462 aa16.05■□□□□ 0.16
WIPI2-213ENST00000488359 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.16
WIPI2-213ENST00000488359 FBLN2P98095 1184 aa15.96■□□□□ 0.15
WIPI2-213ENST00000488359 TRIM41Q8WV44 630 aa15.96■□□□□ 0.15
WIPI2-213ENST00000488359 WDR97A6NE52 1622 aa15.96■□□□□ 0.15
WIPI2-213ENST00000488359 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
WIPI2-213ENST00000488359 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
WIPI2-213ENST00000488359 ABCA10Q8WWZ4 1543 aa15.9■□□□□ 0.14
WIPI2-213ENST00000488359 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
WIPI2-213ENST00000488359 CHMP7Q8WUX9 453 aaPredicted RBP15.89■□□□□ 0.13
WIPI2-213ENST00000488359 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
WIPI2-213ENST00000488359 MAGI1Q96QZ7 1491 aaPredicted RBP15.88■□□□□ 0.13
WIPI2-213ENST00000488359 TOP2BQ02880 1626 aa15.87■□□□□ 0.13
WIPI2-213ENST00000488359 CHD1O14646 1710 aa15.85■□□□□ 0.13
WIPI2-213ENST00000488359 SYNJ1O43426 1573 aa15.84■□□□□ 0.13
WIPI2-213ENST00000488359 BIVM-ERCC5R4GMW8 1640 aa15.84■□□□□ 0.13
WIPI2-213ENST00000488359 SYNJ2O15056 1496 aa15.83■□□□□ 0.12
WIPI2-213ENST00000488359 ARHGEF11O15085 1522 aa15.83■□□□□ 0.12
WIPI2-213ENST00000488359 RIMBP3CA6NJZ7 1639 aa15.83■□□□□ 0.12
WIPI2-213ENST00000488359 RIMBP3BA6NNM3 1639 aa15.83■□□□□ 0.12
WIPI2-213ENST00000488359 RIMBP3Q9UFD9 1639 aa15.83■□□□□ 0.12
WIPI2-213ENST00000488359 ABCA5Q8WWZ7 1642 aa15.81■□□□□ 0.12
WIPI2-213ENST00000488359 PBRM1Q86U86 1689 aa15.76■□□□□ 0.11
WIPI2-213ENST00000488359 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
WIPI2-213ENST00000488359 CLASP1Q7Z460 1538 aa15.74■□□□□ 0.11
WIPI2-213ENST00000488359 FHAD1B1AJZ9 1412 aa15.7■□□□□ 0.1
WIPI2-213ENST00000488359 ERICH3Q5RHP9 1530 aa15.7■□□□□ 0.1
WIPI2-213ENST00000488359 GRIN2AQ12879 1464 aa15.69■□□□□ 0.1
WIPI2-213ENST00000488359 ARAP1Q96P48 1450 aa15.69■□□□□ 0.1
WIPI2-213ENST00000488359 ADAMTS12P58397 1594 aa15.67■□□□□ 0.1
WIPI2-213ENST00000488359 FOXD1Q16676 465 aa15.67■□□□□ 0.1
WIPI2-213ENST00000488359 NUP160Q12769 1436 aa15.64■□□□□ 0.09
WIPI2-213ENST00000488359 KIF27Q86VH2 1401 aa15.61■□□□□ 0.09
WIPI2-213ENST00000488359 IGF1RP08069 1367 aa15.61■□□□□ 0.09
WIPI2-213ENST00000488359 CEP170Q5SW79 1584 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms