RNA–Protein interactions for RNA: ENST00000488298.5

COL1A2-210, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-210ENST00000488298 NISCHQ9Y2I1 1504 aa29.65■■■□□ 2.34
COL1A2-210ENST00000488298 AEBP2Q6ZN18 517 aaPredicted RBP26.92■■□□□ 1.9
COL1A2-210ENST00000488298 ABCC9O60706 1549 aa26.8■■□□□ 1.88
COL1A2-210ENST00000488298 CCDC180Q9P1Z9 1646 aa26.57■■□□□ 1.84
COL1A2-210ENST00000488298 CHIC1Q5VXU3 224 aa26.14■■□□□ 1.78
COL1A2-210ENST00000488298 RB1CC1Q8TDY2 1594 aa25.42■■□□□ 1.66
COL1A2-210ENST00000488298 DNAJC5BQ9UF47 199 aa25.31■■□□□ 1.64
COL1A2-210ENST00000488298 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
COL1A2-210ENST00000488298 NACADO15069 1562 aa25.22■■□□□ 1.63
COL1A2-210ENST00000488298 PABPN1Q86U42 306 aaKnown RBP eCLIP25.01■■□□□ 1.59
COL1A2-210ENST00000488298 MYO15BQ96JP2 1530 aa24.83■■□□□ 1.57
COL1A2-210ENST00000488298 UNC13AQ9UPW8 1703 aa24.75■■□□□ 1.55
COL1A2-210ENST00000488298 ZCCHC6Q5VYS8 1495 aaKnown RBP24.69■■□□□ 1.54
COL1A2-210ENST00000488298 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
COL1A2-210ENST00000488298 DCAF1Q9Y4B6 1507 aa24.56■■□□□ 1.52
COL1A2-210ENST00000488298 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
COL1A2-210ENST00000488298 SCRIBQ14160 1630 aa24.25■■□□□ 1.47
COL1A2-210ENST00000488298 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
COL1A2-210ENST00000488298 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
COL1A2-210ENST00000488298 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.45
COL1A2-210ENST00000488298 DNAJC5Q9H3Z4 198 aa23.35■■□□□ 1.33
COL1A2-210ENST00000488298 NCAPD3P42695 1498 aa23.33■■□□□ 1.33
COL1A2-210ENST00000488298 ATAD2BQ9ULI0 1458 aa23.23■■□□□ 1.31
COL1A2-210ENST00000488298 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
COL1A2-210ENST00000488298 CUX2O14529 1486 aa23.14■■□□□ 1.29
COL1A2-210ENST00000488298 SMARCA2P51531 1590 aa23.14■■□□□ 1.29
COL1A2-210ENST00000488298 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
COL1A2-210ENST00000488298 HMGXB3Q12766 1538 aa23.08■■□□□ 1.29
COL1A2-210ENST00000488298 BAZ1AQ9NRL2 1556 aaPredicted RBP23.01■■□□□ 1.27
COL1A2-210ENST00000488298 PHF23Q9BUL5 403 aaPredicted RBP23.01■■□□□ 1.27
COL1A2-210ENST00000488298 BAZ1BQ9UIG0 1483 aaKnown RBP22.98■■□□□ 1.27
COL1A2-210ENST00000488298 NESP48681 1621 aa22.98■■□□□ 1.27
COL1A2-210ENST00000488298 PEG3Q9GZU2 1588 aa22.89■■□□□ 1.25
COL1A2-210ENST00000488298 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
COL1A2-210ENST00000488298 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
COL1A2-210ENST00000488298 LAMC3Q9Y6N6 1575 aa22.77■■□□□ 1.24
COL1A2-210ENST00000488298 PDS5BQ9NTI5 1447 aa22.72■■□□□ 1.23
COL1A2-210ENST00000488298 THOC2Q8NI27 1593 aaKnown RBP22.71■■□□□ 1.23
COL1A2-210ENST00000488298 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
COL1A2-210ENST00000488298 KIF21AQ7Z4S6 1674 aa22.61■■□□□ 1.21
COL1A2-210ENST00000488298 WIZO95785 1651 aa22.6■■□□□ 1.21
COL1A2-210ENST00000488298 RSF1Q96T23 1441 aaPredicted RBP22.56■■□□□ 1.2
COL1A2-210ENST00000488298 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
COL1A2-210ENST00000488298 WDR62O43379 1518 aa22.4■■□□□ 1.18
COL1A2-210ENST00000488298 CEP164Q9UPV0 1460 aa22.37■■□□□ 1.17
COL1A2-210ENST00000488298 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
COL1A2-210ENST00000488298 TOP2AP11388 1531 aaKnown RBP22.32■■□□□ 1.16
COL1A2-210ENST00000488298 CFTRP13569 1480 aa22.32■■□□□ 1.16
COL1A2-210ENST00000488298 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
COL1A2-210ENST00000488298 OSCARQ8IYS5 282 aa22.17■■□□□ 1.14
COL1A2-210ENST00000488298 URB2Q14146 1524 aaKnown RBP22.15■■□□□ 1.14
COL1A2-210ENST00000488298 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
COL1A2-210ENST00000488298 PRDM2Q13029 1718 aa21.96■■□□□ 1.11
COL1A2-210ENST00000488298 IFT140Q96RY7 1462 aa21.94■■□□□ 1.1
COL1A2-210ENST00000488298 ZNF608Q9ULD9 1512 aaPredicted RBP21.9■■□□□ 1.1
COL1A2-210ENST00000488298 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
COL1A2-210ENST00000488298 ABCC8Q09428 1581 aa21.87■■□□□ 1.09
COL1A2-210ENST00000488298 SUPT5HO00267 1087 aaKnown RBP21.78■■□□□ 1.08
COL1A2-210ENST00000488298 DNMBPQ6XZF7 1577 aa21.78■■□□□ 1.08
COL1A2-210ENST00000488298 RIMBP3CA6NJZ7 1639 aa21.76■■□□□ 1.07
COL1A2-210ENST00000488298 RIMBP3BA6NNM3 1639 aa21.76■■□□□ 1.07
COL1A2-210ENST00000488298 RIMBP3Q9UFD9 1639 aa21.76■■□□□ 1.07
COL1A2-210ENST00000488298 AQRO60306 1485 aaKnown RBP eCLIP21.73■■□□□ 1.07
COL1A2-210ENST00000488298 EIF4G3O43432 1585 aaKnown RBP21.72■■□□□ 1.07
COL1A2-210ENST00000488298 ARHGEF11O15085 1522 aa21.7■■□□□ 1.07
COL1A2-210ENST00000488298 FBLN2P98095 1184 aa21.68■■□□□ 1.06
COL1A2-210ENST00000488298 TARBP1Q13395 1621 aaKnown RBP21.67■■□□□ 1.06
COL1A2-210ENST00000488298 POLA1P09884 1462 aaPredicted RBP21.67■■□□□ 1.06
COL1A2-210ENST00000488298 CYB5RLQ6IPT4 315 aa21.66■■□□□ 1.06
COL1A2-210ENST00000488298 SOGA1O94964 1423 aa21.62■■□□□ 1.05
COL1A2-210ENST00000488298 RAD54L2Q9Y4B4 1467 aa21.61■■□□□ 1.05
COL1A2-210ENST00000488298 TDRD9Q8NDG6 1382 aaKnown RBP21.6■■□□□ 1.05
COL1A2-210ENST00000488298 CHD1O14646 1710 aa21.57■■□□□ 1.04
COL1A2-210ENST00000488298 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.03
COL1A2-210ENST00000488298 CHMP7Q8WUX9 453 aaPredicted RBP21.49■■□□□ 1.03
COL1A2-210ENST00000488298 ARAP1Q96P48 1450 aa21.48■■□□□ 1.03
COL1A2-210ENST00000488298 SNAPC4Q5SXM2 1469 aa21.47■■□□□ 1.03
COL1A2-210ENST00000488298 TRHP20396 242 aaPredicted RBP21.47■■□□□ 1.03
COL1A2-210ENST00000488298 CUX1P39880 1505 aa21.46■■□□□ 1.03
COL1A2-210ENST00000488298 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
COL1A2-210ENST00000488298 GRIN2BQ13224 1484 aa21.41■■□□□ 1.02
COL1A2-210ENST00000488298 MAGI1Q96QZ7 1491 aaPredicted RBP21.4■■□□□ 1.02
COL1A2-210ENST00000488298 SYNJ1O43426 1573 aa21.36■■□□□ 1.01
COL1A2-210ENST00000488298 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
COL1A2-210ENST00000488298 SYNJ2O15056 1496 aa21.34■■□□□ 1.01
COL1A2-210ENST00000488298 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
COL1A2-210ENST00000488298 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
COL1A2-210ENST00000488298 ABCA10Q8WWZ4 1543 aa21.26■□□□□ 0.99
COL1A2-210ENST00000488298 TOP2BQ02880 1626 aa21.24■□□□□ 0.99
COL1A2-210ENST00000488298 PBRM1Q86U86 1689 aa21.22■□□□□ 0.99
COL1A2-210ENST00000488298 FOXD1Q16676 465 aa21.21■□□□□ 0.99
COL1A2-210ENST00000488298 WRNQ14191 1432 aaPredicted RBP eCLIP21.2■□□□□ 0.98
COL1A2-210ENST00000488298 ABCA5Q8WWZ7 1642 aa21.18■□□□□ 0.98
COL1A2-210ENST00000488298 PLPPR3Q6T4P5 718 aa21.17■□□□□ 0.98
COL1A2-210ENST00000488298 GRIN2AQ12879 1464 aa21.12■□□□□ 0.97
COL1A2-210ENST00000488298 NUP160Q12769 1436 aa21.06■□□□□ 0.96
COL1A2-210ENST00000488298 FHAD1B1AJZ9 1412 aa21.05■□□□□ 0.96
COL1A2-210ENST00000488298 ADAMTS12P58397 1594 aa21.04■□□□□ 0.96
COL1A2-210ENST00000488298 ERCC6L2Q5T890 1561 aa21.02■□□□□ 0.96
COL1A2-210ENST00000488298 CEP170Q5SW79 1584 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms