RNA–Protein interactions for RNA: ENST00000488253.5

PLSCR1-215, Transcript of phospholipid scramblase 1, humanhuman

TSL 3

Gene PLSCR1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-215ENST00000488253 NISCHQ9Y2I1 1504 aa32.67■■■□□ 2.82
PLSCR1-215ENST00000488253 AEBP2Q6ZN18 517 aaPredicted RBP29.52■■■□□ 2.32
PLSCR1-215ENST00000488253 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
PLSCR1-215ENST00000488253 ABCC9O60706 1549 aa28.96■■■□□ 2.23
PLSCR1-215ENST00000488253 RB1CC1Q8TDY2 1594 aa27.73■■■□□ 2.03
PLSCR1-215ENST00000488253 DCAF8L2P0C7V8 631 aa27.58■■■□□ 2.01
PLSCR1-215ENST00000488253 NACADO15069 1562 aa27.57■■■□□ 2
PLSCR1-215ENST00000488253 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
PLSCR1-215ENST00000488253 MYO15BQ96JP2 1530 aa27.24■■□□□ 1.95
PLSCR1-215ENST00000488253 ZCCHC6Q5VYS8 1495 aaKnown RBP27.13■■□□□ 1.93
PLSCR1-215ENST00000488253 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
PLSCR1-215ENST00000488253 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
PLSCR1-215ENST00000488253 PABPN1Q86U42 306 aaKnown RBP eCLIP26.99■■□□□ 1.91
PLSCR1-215ENST00000488253 DNAJC5BQ9UF47 199 aa26.8■■□□□ 1.88
PLSCR1-215ENST00000488253 BICRAQ9NZM4 1560 aa26.79■■□□□ 1.88
PLSCR1-215ENST00000488253 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
PLSCR1-215ENST00000488253 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
PLSCR1-215ENST00000488253 EIF4G1Q04637 1599 aaKnown RBP26.18■■□□□ 1.78
PLSCR1-215ENST00000488253 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
PLSCR1-215ENST00000488253 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
PLSCR1-215ENST00000488253 SMARCA4P51532 1647 aa25.44■■□□□ 1.66
PLSCR1-215ENST00000488253 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
PLSCR1-215ENST00000488253 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.65
PLSCR1-215ENST00000488253 SMARCA2P51531 1590 aa25.38■■□□□ 1.65
PLSCR1-215ENST00000488253 ATAD2BQ9ULI0 1458 aa25.37■■□□□ 1.65
PLSCR1-215ENST00000488253 HMGXB3Q12766 1538 aa25.27■■□□□ 1.64
PLSCR1-215ENST00000488253 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
PLSCR1-215ENST00000488253 MROH2BQ7Z745 1585 aa25.15■■□□□ 1.62
PLSCR1-215ENST00000488253 PEG3Q9GZU2 1588 aa25.15■■□□□ 1.62
PLSCR1-215ENST00000488253 SENP3Q9H4L4 574 aaPredicted RBP25.12■■□□□ 1.61
PLSCR1-215ENST00000488253 ERCC6Q03468 1493 aa25.06■■□□□ 1.6
PLSCR1-215ENST00000488253 NESP48681 1621 aa24.91■■□□□ 1.58
PLSCR1-215ENST00000488253 WIZO95785 1651 aa24.9■■□□□ 1.58
PLSCR1-215ENST00000488253 CUX2O14529 1486 aa24.86■■□□□ 1.57
PLSCR1-215ENST00000488253 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
PLSCR1-215ENST00000488253 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
PLSCR1-215ENST00000488253 RSF1Q96T23 1441 aaPredicted RBP24.73■■□□□ 1.55
PLSCR1-215ENST00000488253 PDS5BQ9NTI5 1447 aa24.71■■□□□ 1.55
PLSCR1-215ENST00000488253 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
PLSCR1-215ENST00000488253 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
PLSCR1-215ENST00000488253 THOC2Q8NI27 1593 aaKnown RBP24.62■■□□□ 1.53
PLSCR1-215ENST00000488253 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
PLSCR1-215ENST00000488253 DNAJC5Q9H3Z4 198 aa24.49■■□□□ 1.51
PLSCR1-215ENST00000488253 MRC2Q9UBG0 1479 aa24.46■■□□□ 1.51
PLSCR1-215ENST00000488253 CEP164Q9UPV0 1460 aa24.45■■□□□ 1.5
PLSCR1-215ENST00000488253 CFTRP13569 1480 aa24.43■■□□□ 1.5
PLSCR1-215ENST00000488253 FANCD2Q9BXW9 1451 aa24.41■■□□□ 1.5
PLSCR1-215ENST00000488253 WDR62O43379 1518 aa24.36■■□□□ 1.49
PLSCR1-215ENST00000488253 CCDC88BA6NC98 1476 aa24.31■■□□□ 1.48
PLSCR1-215ENST00000488253 PRDM2Q13029 1718 aa24.28■■□□□ 1.48
PLSCR1-215ENST00000488253 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
PLSCR1-215ENST00000488253 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
PLSCR1-215ENST00000488253 TOPBP1Q92547 1522 aa23.96■■□□□ 1.43
PLSCR1-215ENST00000488253 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
PLSCR1-215ENST00000488253 IFT140Q96RY7 1462 aa23.93■■□□□ 1.42
PLSCR1-215ENST00000488253 DNMBPQ6XZF7 1577 aa23.92■■□□□ 1.42
PLSCR1-215ENST00000488253 ZNF608Q9ULD9 1512 aaPredicted RBP23.8■■□□□ 1.4
PLSCR1-215ENST00000488253 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
PLSCR1-215ENST00000488253 EIF4G3O43432 1585 aaKnown RBP23.74■■□□□ 1.39
PLSCR1-215ENST00000488253 POLA1P09884 1462 aaPredicted RBP23.73■■□□□ 1.39
PLSCR1-215ENST00000488253 TARBP1Q13395 1621 aaKnown RBP23.7■■□□□ 1.39
PLSCR1-215ENST00000488253 SOGA1O94964 1423 aa23.66■■□□□ 1.38
PLSCR1-215ENST00000488253 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.383e-7■■■□□ 16
PLSCR1-215ENST00000488253 FGD5Q6ZNL6 1462 aa23.64■■□□□ 1.38
PLSCR1-215ENST00000488253 RAD54L2Q9Y4B4 1467 aa23.63■■□□□ 1.37
PLSCR1-215ENST00000488253 CUX1P39880 1505 aa23.63■■□□□ 1.37
PLSCR1-215ENST00000488253 TRIM41Q8WV44 630 aa23.62■■□□□ 1.37
PLSCR1-215ENST00000488253 FOXD1Q16676 465 aa23.57■■□□□ 1.36
PLSCR1-215ENST00000488253 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
PLSCR1-215ENST00000488253 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
PLSCR1-215ENST00000488253 FBLN2P98095 1184 aa23.54■■□□□ 1.36
PLSCR1-215ENST00000488253 CHD1O14646 1710 aa23.52■■□□□ 1.36
PLSCR1-215ENST00000488253 SNAPC4Q5SXM2 1469 aa23.44■■□□□ 1.34
PLSCR1-215ENST00000488253 GRIN2BQ13224 1484 aa23.43■■□□□ 1.34
PLSCR1-215ENST00000488253 RIMBP3CA6NJZ7 1639 aa23.42■■□□□ 1.34
PLSCR1-215ENST00000488253 RIMBP3BA6NNM3 1639 aa23.42■■□□□ 1.34
PLSCR1-215ENST00000488253 RIMBP3Q9UFD9 1639 aa23.42■■□□□ 1.34
PLSCR1-215ENST00000488253 MAGI1Q96QZ7 1491 aaPredicted RBP23.4■■□□□ 1.34
PLSCR1-215ENST00000488253 CHMP7Q8WUX9 453 aaPredicted RBP23.39■■□□□ 1.33
PLSCR1-215ENST00000488253 WRNQ14191 1432 aaPredicted RBP eCLIP23.39■■□□□ 1.33
PLSCR1-215ENST00000488253 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
PLSCR1-215ENST00000488253 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
PLSCR1-215ENST00000488253 PBRM1Q86U86 1689 aa23.37■■□□□ 1.33
PLSCR1-215ENST00000488253 ARHGEF11O15085 1522 aa23.37■■□□□ 1.33
PLSCR1-215ENST00000488253 TOP2BQ02880 1626 aa23.36■■□□□ 1.33
PLSCR1-215ENST00000488253 BIVM-ERCC5R4GMW8 1640 aa23.36■■□□□ 1.33
PLSCR1-215ENST00000488253 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
PLSCR1-215ENST00000488253 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
PLSCR1-215ENST00000488253 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
PLSCR1-215ENST00000488253 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
PLSCR1-215ENST00000488253 CLASP1Q7Z460 1538 aa23.2■■□□□ 1.3
PLSCR1-215ENST00000488253 ADAMTS12P58397 1594 aa23.14■■□□□ 1.29
PLSCR1-215ENST00000488253 ARAP1Q96P48 1450 aa23.13■■□□□ 1.29
PLSCR1-215ENST00000488253 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
PLSCR1-215ENST00000488253 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
PLSCR1-215ENST00000488253 FHAD1B1AJZ9 1412 aa23.09■■□□□ 1.29
PLSCR1-215ENST00000488253 CEP170Q5SW79 1584 aa22.99■■□□□ 1.27
PLSCR1-215ENST00000488253 NUP160Q12769 1436 aa22.99■■□□□ 1.27
PLSCR1-215ENST00000488253 KIF27Q86VH2 1401 aa22.95■■□□□ 1.26
PLSCR1-215ENST00000488253 TRHP20396 242 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms