RNA–Protein interactions for RNA: ENST00000488239.1

ATXN7-211, Transcript of ataxin 7, humanhuman

TSL 5

Gene ATXN7, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN7-211ENST00000488239 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
ATXN7-211ENST00000488239 NISCHQ9Y2I1 1504 aa17■□□□□ 0.31
ATXN7-211ENST00000488239 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
ATXN7-211ENST00000488239 CCDC180Q9P1Z9 1646 aa15.17■□□□□ 0.02
ATXN7-211ENST00000488239 SENP3Q9H4L4 574 aaPredicted RBP15.02■□□□□ -0
ATXN7-211ENST00000488239 ABCC9O60706 1549 aa15□□□□□ -0.01
ATXN7-211ENST00000488239 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
ATXN7-211ENST00000488239 RB1CC1Q8TDY2 1594 aa14.35□□□□□ -0.11
ATXN7-211ENST00000488239 NACADO15069 1562 aa14.3□□□□□ -0.12
ATXN7-211ENST00000488239 DCAF8L2P0C7V8 631 aa14.27□□□□□ -0.13
ATXN7-211ENST00000488239 MYO15BQ96JP2 1530 aa14.17□□□□□ -0.14
ATXN7-211ENST00000488239 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
ATXN7-211ENST00000488239 DCAF1Q9Y4B6 1507 aa14.05□□□□□ -0.16
ATXN7-211ENST00000488239 FOXD1Q16676 465 aa14.03□□□□□ -0.16
ATXN7-211ENST00000488239 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
ATXN7-211ENST00000488239 UNC13AQ9UPW8 1703 aa13.98□□□□□ -0.17
ATXN7-211ENST00000488239 BICRAQ9NZM4 1560 aa13.92□□□□□ -0.18
ATXN7-211ENST00000488239 DNAJC5BQ9UF47 199 aa13.89□□□□□ -0.19
ATXN7-211ENST00000488239 SCRIBQ14160 1630 aa13.84□□□□□ -0.19
ATXN7-211ENST00000488239 SHROOM4Q9ULL8 1493 aa13.78□□□□□ -0.2
ATXN7-211ENST00000488239 EIF4G1Q04637 1599 aaKnown RBP13.58□□□□□ -0.24
ATXN7-211ENST00000488239 CC2D2AQ9P2K1 1620 aa13.54□□□□□ -0.24
ATXN7-211ENST00000488239 PLPPR3Q6T4P5 718 aa13.5□□□□□ -0.25
ATXN7-211ENST00000488239 CECR2Q9BXF3 1484 aa13.49□□□□□ -0.25
ATXN7-211ENST00000488239 SMARCA4P51532 1647 aa13.22□□□□□ -0.29
ATXN7-211ENST00000488239 PPP6R1Q9UPN7 881 aa13.21□□□□□ -0.29
ATXN7-211ENST00000488239 NCAPD3P42695 1498 aa13.2□□□□□ -0.3
ATXN7-211ENST00000488239 ATAD2BQ9ULI0 1458 aa13.19□□□□□ -0.3
ATXN7-211ENST00000488239 BAZ1AQ9NRL2 1556 aaPredicted RBP13.19□□□□□ -0.3
ATXN7-211ENST00000488239 ADRA2BP18089 450 aa13.17□□□□□ -0.3
ATXN7-211ENST00000488239 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
ATXN7-211ENST00000488239 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
ATXN7-211ENST00000488239 MROH2BQ7Z745 1585 aa13.11□□□□□ -0.31
ATXN7-211ENST00000488239 PIAS4Q8N2W9 510 aaPredicted RBP13.09□□□□□ -0.31
ATXN7-211ENST00000488239 PEG3Q9GZU2 1588 aa13.09□□□□□ -0.31
ATXN7-211ENST00000488239 BAZ1BQ9UIG0 1483 aaKnown RBP13.08□□□□□ -0.32
ATXN7-211ENST00000488239 MSH5O43196 834 aa13.04□□□□□ -0.32
ATXN7-211ENST00000488239 WIZO95785 1651 aa12.94□□□□□ -0.34
ATXN7-211ENST00000488239 ERCC6Q03468 1493 aa12.94□□□□□ -0.34
ATXN7-211ENST00000488239 NESP48681 1621 aa12.93□□□□□ -0.34
ATXN7-211ENST00000488239 RSF1Q96T23 1441 aaPredicted RBP12.9□□□□□ -0.34
ATXN7-211ENST00000488239 LAMC3Q9Y6N6 1575 aa12.87□□□□□ -0.35
ATXN7-211ENST00000488239 CUX2O14529 1486 aa12.85□□□□□ -0.35
ATXN7-211ENST00000488239 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
ATXN7-211ENST00000488239 TOP2AP11388 1531 aaKnown RBP12.81□□□□□ -0.36
ATXN7-211ENST00000488239 PDS5BQ9NTI5 1447 aa12.8□□□□□ -0.36
ATXN7-211ENST00000488239 THOC2Q8NI27 1593 aaKnown RBP12.77□□□□□ -0.37
ATXN7-211ENST00000488239 KIF21AQ7Z4S6 1674 aa12.76□□□□□ -0.37
ATXN7-211ENST00000488239 CFTRP13569 1480 aa12.71□□□□□ -0.38
ATXN7-211ENST00000488239 MRC2Q9UBG0 1479 aa12.68□□□□□ -0.38
ATXN7-211ENST00000488239 CEP164Q9UPV0 1460 aa12.67□□□□□ -0.38
ATXN7-211ENST00000488239 CCDC88BA6NC98 1476 aa12.66□□□□□ -0.38
ATXN7-211ENST00000488239 FANCD2Q9BXW9 1451 aa12.66□□□□□ -0.38
ATXN7-211ENST00000488239 WDR62O43379 1518 aa12.64□□□□□ -0.39
ATXN7-211ENST00000488239 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
ATXN7-211ENST00000488239 POTEDQ86YR6 584 aa12.6□□□□□ -0.39
ATXN7-211ENST00000488239 PRDM2Q13029 1718 aa12.55□□□□□ -0.4
ATXN7-211ENST00000488239 URB2Q14146 1524 aaKnown RBP12.55□□□□□ -0.4
ATXN7-211ENST00000488239 SUPT5HO00267 1087 aaKnown RBP12.47□□□□□ -0.41
ATXN7-211ENST00000488239 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
ATXN7-211ENST00000488239 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
ATXN7-211ENST00000488239 DNMBPQ6XZF7 1577 aa12.42□□□□□ -0.42
ATXN7-211ENST00000488239 IFT140Q96RY7 1462 aa12.41□□□□□ -0.42
ATXN7-211ENST00000488239 ZNF608Q9ULD9 1512 aaPredicted RBP12.37□□□□□ -0.43
ATXN7-211ENST00000488239 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
ATXN7-211ENST00000488239 TARBP1Q13395 1621 aaKnown RBP12.32□□□□□ -0.44
ATXN7-211ENST00000488239 EIF4G3O43432 1585 aaKnown RBP12.31□□□□□ -0.44
ATXN7-211ENST00000488239 CUX1P39880 1505 aa12.3□□□□□ -0.44
ATXN7-211ENST00000488239 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
ATXN7-211ENST00000488239 SOGA1O94964 1423 aa12.28□□□□□ -0.44
ATXN7-211ENST00000488239 FGD5Q6ZNL6 1462 aa12.28□□□□□ -0.44
ATXN7-211ENST00000488239 RAD54L2Q9Y4B4 1467 aa12.28□□□□□ -0.44
ATXN7-211ENST00000488239 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.441e-6■■□□□ 14.5
ATXN7-211ENST00000488239 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
ATXN7-211ENST00000488239 WDR97A6NE52 1622 aa12.21□□□□□ -0.46
ATXN7-211ENST00000488239 WRNQ14191 1432 aaPredicted RBP eCLIP12.18□□□□□ -0.46
ATXN7-211ENST00000488239 SNAPC4Q5SXM2 1469 aa12.16□□□□□ -0.46
ATXN7-211ENST00000488239 FBLN2P98095 1184 aa12.16□□□□□ -0.46
ATXN7-211ENST00000488239 ABCA10Q8WWZ4 1543 aa12.16□□□□□ -0.46
ATXN7-211ENST00000488239 TOP2BQ02880 1626 aa12.15□□□□□ -0.46
ATXN7-211ENST00000488239 GRIN2BQ13224 1484 aa12.15□□□□□ -0.46
ATXN7-211ENST00000488239 CHD1O14646 1710 aa12.15□□□□□ -0.46
ATXN7-211ENST00000488239 SYNJ1O43426 1573 aa12.15□□□□□ -0.46
ATXN7-211ENST00000488239 TRIM41Q8WV44 630 aa12.15□□□□□ -0.46
ATXN7-211ENST00000488239 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.47
ATXN7-211ENST00000488239 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
ATXN7-211ENST00000488239 MAGI1Q96QZ7 1491 aaPredicted RBP12.14□□□□□ -0.47
ATXN7-211ENST00000488239 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
ATXN7-211ENST00000488239 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
ATXN7-211ENST00000488239 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
ATXN7-211ENST00000488239 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
ATXN7-211ENST00000488239 CHMP7Q8WUX9 453 aaPredicted RBP12.1□□□□□ -0.47
ATXN7-211ENST00000488239 PBRM1Q86U86 1689 aa12.1□□□□□ -0.47
ATXN7-211ENST00000488239 SYNJ2O15056 1496 aa12.09□□□□□ -0.47
ATXN7-211ENST00000488239 ARHGEF11O15085 1522 aa12.09□□□□□ -0.47
ATXN7-211ENST00000488239 MAPK8IP2Q13387 824 aaPredicted RBP12.07□□□□□ -0.48
ATXN7-211ENST00000488239 CLASP1Q7Z460 1538 aa12.05□□□□□ -0.48
ATXN7-211ENST00000488239 ADAMTS12P58397 1594 aa12.01□□□□□ -0.49
ATXN7-211ENST00000488239 SCAF1Q9H7N4 1312 aaKnown RBP12.01□□□□□ -0.49
ATXN7-211ENST00000488239 ERICH3Q5RHP9 1530 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms