RNA–Protein interactions for RNA: ENST00000488064.5

LAMA1-203, Transcript of laminin subunit alpha 1, humanhuman

TSL 2

Gene LAMA1, Length 2,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-203ENST00000488064 NISCHQ9Y2I1 1504 aa20.19■□□□□ 0.82
LAMA1-203ENST00000488064 CCDC180Q9P1Z9 1646 aa18■□□□□ 0.47
LAMA1-203ENST00000488064 ABCC9O60706 1549 aa17.93■□□□□ 0.46
LAMA1-203ENST00000488064 RB1CC1Q8TDY2 1594 aa17.07■□□□□ 0.32
LAMA1-203ENST00000488064 DCAF8L2P0C7V8 631 aa17.02■□□□□ 0.32
LAMA1-203ENST00000488064 NACADO15069 1562 aa16.99■□□□□ 0.31
LAMA1-203ENST00000488064 MYO15BQ96JP2 1530 aa16.8■□□□□ 0.28
LAMA1-203ENST00000488064 ZCCHC6Q5VYS8 1495 aaKnown RBP16.76■□□□□ 0.27
LAMA1-203ENST00000488064 DNAJC5BQ9UF47 199 aa16.76■□□□□ 0.27
LAMA1-203ENST00000488064 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
LAMA1-203ENST00000488064 UNC13AQ9UPW8 1703 aa16.74■□□□□ 0.27
LAMA1-203ENST00000488064 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
LAMA1-203ENST00000488064 BICRAQ9NZM4 1560 aa16.63■□□□□ 0.25
LAMA1-203ENST00000488064 SCRIBQ14160 1630 aa16.47■□□□□ 0.23
LAMA1-203ENST00000488064 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
LAMA1-203ENST00000488064 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
LAMA1-203ENST00000488064 EIF4G1Q04637 1599 aaKnown RBP16.19■□□□□ 0.18
LAMA1-203ENST00000488064 CECR2Q9BXF3 1484 aa16.12■□□□□ 0.17
LAMA1-203ENST00000488064 SUPT5HO00267 1087 aaKnown RBP15.81■□□□□ 0.12
LAMA1-203ENST00000488064 NCAPD3P42695 1498 aa15.72■□□□□ 0.11
LAMA1-203ENST00000488064 SMARCA4P51532 1647 aa15.71■□□□□ 0.11
LAMA1-203ENST00000488064 ATAD2BQ9ULI0 1458 aa15.7■□□□□ 0.1
LAMA1-203ENST00000488064 BAZ1AQ9NRL2 1556 aaPredicted RBP15.64■□□□□ 0.09
LAMA1-203ENST00000488064 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
LAMA1-203ENST00000488064 HMGXB3Q12766 1538 aa15.59■□□□□ 0.09
LAMA1-203ENST00000488064 MROH2BQ7Z745 1585 aa15.59■□□□□ 0.09
LAMA1-203ENST00000488064 PEG3Q9GZU2 1588 aa15.55■□□□□ 0.08
LAMA1-203ENST00000488064 BAZ1BQ9UIG0 1483 aaKnown RBP15.54■□□□□ 0.08
LAMA1-203ENST00000488064 CHIC1Q5VXU3 224 aa15.47■□□□□ 0.07
LAMA1-203ENST00000488064 NESP48681 1621 aa15.47■□□□□ 0.07
LAMA1-203ENST00000488064 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
LAMA1-203ENST00000488064 WIZO95785 1651 aa15.4■□□□□ 0.06
LAMA1-203ENST00000488064 CUX2O14529 1486 aa15.33■□□□□ 0.04
LAMA1-203ENST00000488064 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
LAMA1-203ENST00000488064 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
LAMA1-203ENST00000488064 HRCP23327 699 aa15.25■□□□□ 0.03
LAMA1-203ENST00000488064 CADPSQ9ULU8 1353 aa15.25■□□□□ 0.03
LAMA1-203ENST00000488064 KIF21AQ7Z4S6 1674 aa15.24■□□□□ 0.03
LAMA1-203ENST00000488064 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
LAMA1-203ENST00000488064 PDS5BQ9NTI5 1447 aa15.22■□□□□ 0.03
LAMA1-203ENST00000488064 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
LAMA1-203ENST00000488064 TOP2AP11388 1531 aaKnown RBP15.18■□□□□ 0.02
LAMA1-203ENST00000488064 CFTRP13569 1480 aa15.11■□□□□ 0.01
LAMA1-203ENST00000488064 PCGF6Q9BYE7 350 aa15.1■□□□□ 0.01
LAMA1-203ENST00000488064 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
LAMA1-203ENST00000488064 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0
LAMA1-203ENST00000488064 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
LAMA1-203ENST00000488064 WDR62O43379 1518 aa15.05■□□□□ 0
LAMA1-203ENST00000488064 CCDC88BA6NC98 1476 aa15.04■□□□□ -0
LAMA1-203ENST00000488064 URB2Q14146 1524 aaKnown RBP14.96□□□□□ -0.01
LAMA1-203ENST00000488064 LOC105371045A0A1W2PR82 267 aa14.96□□□□□ -0.02
LAMA1-203ENST00000488064 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
LAMA1-203ENST00000488064 TRIM26Q12899 539 aaPredicted RBP14.87□□□□□ -0.03
LAMA1-203ENST00000488064 TOPBP1Q92547 1522 aa14.81□□□□□ -0.04
LAMA1-203ENST00000488064 PPARGC1BQ86YN6 1023 aaKnown RBP14.79□□□□□ -0.04
LAMA1-203ENST00000488064 TRIM41Q8WV44 630 aa14.78□□□□□ -0.04
LAMA1-203ENST00000488064 ZNF608Q9ULD9 1512 aaPredicted RBP14.77□□□□□ -0.04
LAMA1-203ENST00000488064 IFT140Q96RY7 1462 aa14.75□□□□□ -0.05
LAMA1-203ENST00000488064 DNMBPQ6XZF7 1577 aa14.74□□□□□ -0.05
LAMA1-203ENST00000488064 ABCC8Q09428 1581 aa14.74□□□□□ -0.05
LAMA1-203ENST00000488064 OSCARQ8IYS5 282 aa14.7□□□□□ -0.06
LAMA1-203ENST00000488064 ZEB1P37275 1124 aaPredicted RBP14.68□□□□□ -0.06
LAMA1-203ENST00000488064 POLA1P09884 1462 aaPredicted RBP14.68□□□□□ -0.06
LAMA1-203ENST00000488064 SLC24A1O60721 1099 aa14.68□□□□□ -0.06
LAMA1-203ENST00000488064 TARBP1Q13395 1621 aaKnown RBP14.67□□□□□ -0.06
LAMA1-203ENST00000488064 EIF4G3O43432 1585 aaKnown RBP14.66□□□□□ -0.06
LAMA1-203ENST00000488064 AQRO60306 1485 aaKnown RBP eCLIP14.65□□□□□ -0.06
LAMA1-203ENST00000488064 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
LAMA1-203ENST00000488064 CUX1P39880 1505 aa14.62□□□□□ -0.07
LAMA1-203ENST00000488064 SOGA1O94964 1423 aa14.61□□□□□ -0.07
LAMA1-203ENST00000488064 FGD5Q6ZNL6 1462 aa14.6□□□□□ -0.07
LAMA1-203ENST00000488064 TDRD9Q8NDG6 1382 aaKnown RBP14.59□□□□□ -0.07
LAMA1-203ENST00000488064 FAM9AQ8IZU1 332 aaPredicted RBP14.57□□□□□ -0.08
LAMA1-203ENST00000488064 CHD1O14646 1710 aa14.52□□□□□ -0.09
LAMA1-203ENST00000488064 FBLN2P98095 1184 aa14.51□□□□□ -0.09
LAMA1-203ENST00000488064 RIMBP3CA6NJZ7 1639 aa14.49□□□□□ -0.09
LAMA1-203ENST00000488064 RIMBP3BA6NNM3 1639 aa14.49□□□□□ -0.09
LAMA1-203ENST00000488064 RIMBP3Q9UFD9 1639 aa14.49□□□□□ -0.09
LAMA1-203ENST00000488064 SNAPC4Q5SXM2 1469 aa14.48□□□□□ -0.09
LAMA1-203ENST00000488064 WDR97A6NE52 1622 aa14.47□□□□□ -0.09
LAMA1-203ENST00000488064 ARHGEF11O15085 1522 aa14.46□□□□□ -0.09
LAMA1-203ENST00000488064 PELP1Q8IZL8 1130 aaKnown RBP14.44□□□□□ -0.1
LAMA1-203ENST00000488064 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
LAMA1-203ENST00000488064 ABCA10Q8WWZ4 1543 aa14.43□□□□□ -0.1
LAMA1-203ENST00000488064 GAPVD1Q14C86 1478 aa14.43□□□□□ -0.1
LAMA1-203ENST00000488064 SYNJ1O43426 1573 aa14.42□□□□□ -0.1
LAMA1-203ENST00000488064 WRNQ14191 1432 aaPredicted RBP eCLIP14.42□□□□□ -0.1
LAMA1-203ENST00000488064 CHMP7Q8WUX9 453 aaPredicted RBP14.42□□□□□ -0.1
LAMA1-203ENST00000488064 MAGI1Q96QZ7 1491 aaPredicted RBP14.42□□□□□ -0.1
LAMA1-203ENST00000488064 TOP2BQ02880 1626 aa14.41□□□□□ -0.1
LAMA1-203ENST00000488064 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
LAMA1-203ENST00000488064 BIVM-ERCC5R4GMW8 1640 aa14.39□□□□□ -0.11
LAMA1-203ENST00000488064 PBRM1Q86U86 1689 aa14.39□□□□□ -0.11
LAMA1-203ENST00000488064 MYT1Q01538 1121 aa14.38□□□□□ -0.11
LAMA1-203ENST00000488064 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
LAMA1-203ENST00000488064 SYNJ2O15056 1496 aa14.38□□□□□ -0.11
LAMA1-203ENST00000488064 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
LAMA1-203ENST00000488064 CLASP1Q7Z460 1538 aa14.35□□□□□ -0.11
LAMA1-203ENST00000488064 ARAP1Q96P48 1450 aa14.34□□□□□ -0.11
LAMA1-203ENST00000488064 GRIN2AQ12879 1464 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms