RNA–Protein interactions for RNA: ENST00000488025.1

CPA4-207, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-207ENST00000488025 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
CPA4-207ENST00000488025 ABCC9O60706 1549 aa20.28■□□□□ 0.84
CPA4-207ENST00000488025 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
CPA4-207ENST00000488025 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
CPA4-207ENST00000488025 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
CPA4-207ENST00000488025 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
CPA4-207ENST00000488025 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.59
CPA4-207ENST00000488025 NACADO15069 1562 aa18.64■□□□□ 0.58
CPA4-207ENST00000488025 BICRAQ9NZM4 1560 aa18.53■□□□□ 0.56
CPA4-207ENST00000488025 DCAF8L2P0C7V8 631 aa18.51■□□□□ 0.55
CPA4-207ENST00000488025 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
CPA4-207ENST00000488025 DNAJC5Q9H3Z4 198 aa18.26■□□□□ 0.51
CPA4-207ENST00000488025 CECR2Q9BXF3 1484 aa18.26■□□□□ 0.51
CPA4-207ENST00000488025 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.48
CPA4-207ENST00000488025 MYO15BQ96JP2 1530 aa18.07■□□□□ 0.48
CPA4-207ENST00000488025 SCRIBQ14160 1630 aa17.98■□□□□ 0.47
CPA4-207ENST00000488025 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
CPA4-207ENST00000488025 ZCCHC6Q5VYS8 1495 aaKnown RBP17.73■□□□□ 0.43
CPA4-207ENST00000488025 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
CPA4-207ENST00000488025 CUX2O14529 1486 aa17.59■□□□□ 0.41
CPA4-207ENST00000488025 ERCC6Q03468 1493 aa17.49■□□□□ 0.39
CPA4-207ENST00000488025 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
CPA4-207ENST00000488025 AEBP2Q6ZN18 517 aaPredicted RBP17.31■□□□□ 0.36
CPA4-207ENST00000488025 NESP48681 1621 aa17.29■□□□□ 0.36
CPA4-207ENST00000488025 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
CPA4-207ENST00000488025 KIF21AQ7Z4S6 1674 aa17.18■□□□□ 0.34
CPA4-207ENST00000488025 NCAPD3P42695 1498 aa17.17■□□□□ 0.34
CPA4-207ENST00000488025 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
CPA4-207ENST00000488025 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
CPA4-207ENST00000488025 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
CPA4-207ENST00000488025 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
CPA4-207ENST00000488025 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
CPA4-207ENST00000488025 BAZ1AQ9NRL2 1556 aaPredicted RBP16.92■□□□□ 0.3
CPA4-207ENST00000488025 BAZ1BQ9UIG0 1483 aaKnown RBP16.92■□□□□ 0.3
CPA4-207ENST00000488025 CHIC1Q5VXU3 224 aa16.91■□□□□ 0.3
CPA4-207ENST00000488025 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
CPA4-207ENST00000488025 PEG3Q9GZU2 1588 aa16.77■□□□□ 0.27
CPA4-207ENST00000488025 WDR62O43379 1518 aa16.76■□□□□ 0.27
CPA4-207ENST00000488025 MRC2Q9UBG0 1479 aa16.76■□□□□ 0.27
CPA4-207ENST00000488025 RIMBP3CA6NJZ7 1639 aa16.73■□□□□ 0.27
CPA4-207ENST00000488025 RIMBP3BA6NNM3 1639 aa16.73■□□□□ 0.27
CPA4-207ENST00000488025 RIMBP3Q9UFD9 1639 aa16.73■□□□□ 0.27
CPA4-207ENST00000488025 MROH2BQ7Z745 1585 aa16.67■□□□□ 0.26
CPA4-207ENST00000488025 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
CPA4-207ENST00000488025 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
CPA4-207ENST00000488025 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
CPA4-207ENST00000488025 WIZO95785 1651 aa16.56■□□□□ 0.24
CPA4-207ENST00000488025 ARHGEF11O15085 1522 aa16.52■□□□□ 0.24
CPA4-207ENST00000488025 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
CPA4-207ENST00000488025 URB2Q14146 1524 aaKnown RBP16.47■□□□□ 0.23
CPA4-207ENST00000488025 CHD1O14646 1710 aa16.43■□□□□ 0.22
CPA4-207ENST00000488025 TRHP20396 242 aaPredicted RBP16.43■□□□□ 0.22
CPA4-207ENST00000488025 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
CPA4-207ENST00000488025 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
CPA4-207ENST00000488025 ZNF608Q9ULD9 1512 aaPredicted RBP16.38■□□□□ 0.21
CPA4-207ENST00000488025 CFTRP13569 1480 aa16.33■□□□□ 0.2
CPA4-207ENST00000488025 ARAP1Q96P48 1450 aa16.32■□□□□ 0.2
CPA4-207ENST00000488025 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
CPA4-207ENST00000488025 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
CPA4-207ENST00000488025 TOPBP1Q92547 1522 aa16.15■□□□□ 0.18
CPA4-207ENST00000488025 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.18
CPA4-207ENST00000488025 TARBP1Q13395 1621 aaKnown RBP16.12■□□□□ 0.17
CPA4-207ENST00000488025 AQRO60306 1485 aaKnown RBP eCLIP16.12■□□□□ 0.17
CPA4-207ENST00000488025 FBLN2P98095 1184 aa16.12■□□□□ 0.17
CPA4-207ENST00000488025 RSF1Q96T23 1441 aaPredicted RBP16.09■□□□□ 0.17
CPA4-207ENST00000488025 DNMBPQ6XZF7 1577 aa16.05■□□□□ 0.16
CPA4-207ENST00000488025 CLASP1Q7Z460 1538 aa16.03■□□□□ 0.16
CPA4-207ENST00000488025 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
CPA4-207ENST00000488025 RAD54L2Q9Y4B4 1467 aa15.95■□□□□ 0.14
CPA4-207ENST00000488025 ABCC8Q09428 1581 aa15.95■□□□□ 0.14
CPA4-207ENST00000488025 POLA1P09884 1462 aaPredicted RBP15.94■□□□□ 0.14
CPA4-207ENST00000488025 SNAPC4Q5SXM2 1469 aa15.94■□□□□ 0.14
CPA4-207ENST00000488025 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
CPA4-207ENST00000488025 KIF13AQ9H1H9 1805 aa15.93■□□□□ 0.14
CPA4-207ENST00000488025 TDRD9Q8NDG6 1382 aaKnown RBP15.9■□□□□ 0.14
CPA4-207ENST00000488025 PBRM1Q86U86 1689 aa15.89■□□□□ 0.13
CPA4-207ENST00000488025 GAPVD1Q14C86 1478 aa15.86■□□□□ 0.13
CPA4-207ENST00000488025 ERCC6L2Q5T890 1561 aa15.84■□□□□ 0.13
CPA4-207ENST00000488025 CHMP7Q8WUX9 453 aaPredicted RBP15.83■□□□□ 0.12
CPA4-207ENST00000488025 WDR97A6NE52 1622 aa15.82■□□□□ 0.12
CPA4-207ENST00000488025 SOGA1O94964 1423 aa15.81■□□□□ 0.12
CPA4-207ENST00000488025 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
CPA4-207ENST00000488025 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
CPA4-207ENST00000488025 ILDR1Q86SU0 546 aaPredicted RBP15.78■□□□□ 0.12
CPA4-207ENST00000488025 SYNJ2O15056 1496 aa15.77■□□□□ 0.11
CPA4-207ENST00000488025 GRIN2BQ13224 1484 aa15.73■□□□□ 0.11
CPA4-207ENST00000488025 TSPOAP1O95153 1857 aa15.71■□□□□ 0.11
CPA4-207ENST00000488025 CUX1P39880 1505 aa15.7■□□□□ 0.1
CPA4-207ENST00000488025 CEP170Q5SW79 1584 aa15.68■□□□□ 0.1
CPA4-207ENST00000488025 ABCA5Q8WWZ7 1642 aa15.64■□□□□ 0.09
CPA4-207ENST00000488025 SHROOM2Q13796 1616 aa15.61■□□□□ 0.09
CPA4-207ENST00000488025 KDM4FA0A1W2PPD8 638 aa15.61■□□□□ 0.09
CPA4-207ENST00000488025 KDM6BO15054 1643 aa15.57■□□□□ 0.08
CPA4-207ENST00000488025 GRIN2AQ12879 1464 aa15.57■□□□□ 0.08
CPA4-207ENST00000488025 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
CPA4-207ENST00000488025 DIP2BQ9P265 1576 aa15.53■□□□□ 0.08
CPA4-207ENST00000488025 FAM69CQ0P6D2 419 aa15.5■□□□□ 0.07
CPA4-207ENST00000488025 NUP160Q12769 1436 aa15.5■□□□□ 0.07
CPA4-207ENST00000488025 ABCA10Q8WWZ4 1543 aa15.49■□□□□ 0.07
CPA4-207ENST00000488025 ABCC10Q5T3U5 1492 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms