RNA–Protein interactions for RNA: ENST00000487299.5

DPPA4-206, Transcript of developmental pluripotency associated 4, humanhuman

TSL 2

Gene DPPA4, Length 731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPPA4-206ENST00000487299 AEBP2Q6ZN18 517 aaPredicted RBP27.32■■□□□ 1.96
DPPA4-206ENST00000487299 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
DPPA4-206ENST00000487299 NISCHQ9Y2I1 1504 aa24.76■■□□□ 1.55
DPPA4-206ENST00000487299 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
DPPA4-206ENST00000487299 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
DPPA4-206ENST00000487299 ABCC9O60706 1549 aa22.31■■□□□ 1.16
DPPA4-206ENST00000487299 CCDC180Q9P1Z9 1646 aa22.2■■□□□ 1.15
DPPA4-206ENST00000487299 FOXD1Q16676 465 aa21.82■■□□□ 1.08
DPPA4-206ENST00000487299 RB1CC1Q8TDY2 1594 aa21.15■□□□□ 0.98
DPPA4-206ENST00000487299 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
DPPA4-206ENST00000487299 NACADO15069 1562 aa21■□□□□ 0.95
DPPA4-206ENST00000487299 DCAF8L2P0C7V8 631 aa20.83■□□□□ 0.93
DPPA4-206ENST00000487299 POTEDQ86YR6 584 aa20.8■□□□□ 0.92
DPPA4-206ENST00000487299 PABPN1Q86U42 306 aaKnown RBP eCLIP20.76■□□□□ 0.91
DPPA4-206ENST00000487299 UNC13AQ9UPW8 1703 aa20.75■□□□□ 0.91
DPPA4-206ENST00000487299 MYO15BQ96JP2 1530 aa20.7■□□□□ 0.9
DPPA4-206ENST00000487299 BICRAQ9NZM4 1560 aa20.65■□□□□ 0.9
DPPA4-206ENST00000487299 MSH5O43196 834 aa20.59■□□□□ 0.89
DPPA4-206ENST00000487299 ZCCHC6Q5VYS8 1495 aaKnown RBP20.53■□□□□ 0.88
DPPA4-206ENST00000487299 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
DPPA4-206ENST00000487299 PIAS4Q8N2W9 510 aaPredicted RBP20.3■□□□□ 0.84
DPPA4-206ENST00000487299 SCRIBQ14160 1630 aa20.27■□□□□ 0.84
DPPA4-206ENST00000487299 SHROOM4Q9ULL8 1493 aa20.25■□□□□ 0.83
DPPA4-206ENST00000487299 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
DPPA4-206ENST00000487299 CC2D2AQ9P2K1 1620 aa20.16■□□□□ 0.82
DPPA4-206ENST00000487299 EIF4G1Q04637 1599 aaKnown RBP20.1■□□□□ 0.81
DPPA4-206ENST00000487299 CECR2Q9BXF3 1484 aa20.09■□□□□ 0.81
DPPA4-206ENST00000487299 PPP6R1Q9UPN7 881 aa20.08■□□□□ 0.81
DPPA4-206ENST00000487299 ADRA2BP18089 450 aa19.99■□□□□ 0.79
DPPA4-206ENST00000487299 NCAPD3P42695 1498 aa19.42■□□□□ 0.7
DPPA4-206ENST00000487299 ATAD2BQ9ULI0 1458 aa19.37■□□□□ 0.69
DPPA4-206ENST00000487299 SMARCA4P51532 1647 aa19.33■□□□□ 0.69
DPPA4-206ENST00000487299 DNAJC5Q9H3Z4 198 aa19.29■□□□□ 0.68
DPPA4-206ENST00000487299 HMGXB3Q12766 1538 aa19.26■□□□□ 0.67
DPPA4-206ENST00000487299 SMARCA2P51531 1590 aa19.26■□□□□ 0.67
DPPA4-206ENST00000487299 CUX2O14529 1486 aa19.22■□□□□ 0.67
DPPA4-206ENST00000487299 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
DPPA4-206ENST00000487299 NESP48681 1621 aa19.19■□□□□ 0.66
DPPA4-206ENST00000487299 BAZ1AQ9NRL2 1556 aaPredicted RBP19.18■□□□□ 0.66
DPPA4-206ENST00000487299 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
DPPA4-206ENST00000487299 BAZ1BQ9UIG0 1483 aaKnown RBP19.14■□□□□ 0.65
DPPA4-206ENST00000487299 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
DPPA4-206ENST00000487299 THOC2Q8NI27 1593 aaKnown RBP19■□□□□ 0.63
DPPA4-206ENST00000487299 LAMC3Q9Y6N6 1575 aa18.96■□□□□ 0.63
DPPA4-206ENST00000487299 KIF21AQ7Z4S6 1674 aa18.91■□□□□ 0.62
DPPA4-206ENST00000487299 WIZO95785 1651 aa18.86■□□□□ 0.61
DPPA4-206ENST00000487299 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.6
DPPA4-206ENST00000487299 CADPSQ9ULU8 1353 aa18.81■□□□□ 0.6
DPPA4-206ENST00000487299 MRC2Q9UBG0 1479 aa18.71■□□□□ 0.59
DPPA4-206ENST00000487299 WDR62O43379 1518 aa18.7■□□□□ 0.58
DPPA4-206ENST00000487299 RSF1Q96T23 1441 aaPredicted RBP18.67■□□□□ 0.58
DPPA4-206ENST00000487299 CFTRP13569 1480 aa18.61■□□□□ 0.57
DPPA4-206ENST00000487299 CEP164Q9UPV0 1460 aa18.61■□□□□ 0.57
DPPA4-206ENST00000487299 TOP2AP11388 1531 aaKnown RBP18.6■□□□□ 0.57
DPPA4-206ENST00000487299 FANCD2Q9BXW9 1451 aa18.6■□□□□ 0.57
DPPA4-206ENST00000487299 URB2Q14146 1524 aaKnown RBP18.51■□□□□ 0.55
DPPA4-206ENST00000487299 MAPK8IP2Q13387 824 aaPredicted RBP18.48■□□□□ 0.55
DPPA4-206ENST00000487299 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
DPPA4-206ENST00000487299 CCDC88BA6NC98 1476 aa18.4■□□□□ 0.54
DPPA4-206ENST00000487299 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
DPPA4-206ENST00000487299 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
DPPA4-206ENST00000487299 ZNF608Q9ULD9 1512 aaPredicted RBP18.29■□□□□ 0.52
DPPA4-206ENST00000487299 OSCARQ8IYS5 282 aa18.28■□□□□ 0.52
DPPA4-206ENST00000487299 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.52
DPPA4-206ENST00000487299 TOPBP1Q92547 1522 aa18.27■□□□□ 0.51
DPPA4-206ENST00000487299 IFT140Q96RY7 1462 aa18.25■□□□□ 0.51
DPPA4-206ENST00000487299 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
DPPA4-206ENST00000487299 EIF4G3O43432 1585 aaKnown RBP18.16■□□□□ 0.5
DPPA4-206ENST00000487299 RIMBP3CA6NJZ7 1639 aa18.14■□□□□ 0.49
DPPA4-206ENST00000487299 RIMBP3BA6NNM3 1639 aa18.14■□□□□ 0.49
DPPA4-206ENST00000487299 RIMBP3Q9UFD9 1639 aa18.14■□□□□ 0.49
DPPA4-206ENST00000487299 ABCC8Q09428 1581 aa18.13■□□□□ 0.49
DPPA4-206ENST00000487299 TARBP1Q13395 1621 aaKnown RBP18.12■□□□□ 0.49
DPPA4-206ENST00000487299 AQRO60306 1485 aaKnown RBP eCLIP18.09■□□□□ 0.49
DPPA4-206ENST00000487299 POLA1P09884 1462 aaPredicted RBP18.08■□□□□ 0.49
DPPA4-206ENST00000487299 ARHGEF11O15085 1522 aa18.07■□□□□ 0.48
DPPA4-206ENST00000487299 RAD54L2Q9Y4B4 1467 aa18.04■□□□□ 0.48
DPPA4-206ENST00000487299 CHD1O14646 1710 aa18.03■□□□□ 0.48
DPPA4-206ENST00000487299 CUX1P39880 1505 aa17.96■□□□□ 0.47
DPPA4-206ENST00000487299 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
DPPA4-206ENST00000487299 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
DPPA4-206ENST00000487299 SOGA1O94964 1423 aa17.95■□□□□ 0.46
DPPA4-206ENST00000487299 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
DPPA4-206ENST00000487299 SNAPC4Q5SXM2 1469 aa17.91■□□□□ 0.46
DPPA4-206ENST00000487299 CACNB1Q02641 598 aaPredicted RBP17.9■□□□□ 0.46
DPPA4-206ENST00000487299 FBLN2P98095 1184 aa17.89■□□□□ 0.45
DPPA4-206ENST00000487299 CYB5RLQ6IPT4 315 aa17.89■□□□□ 0.45
DPPA4-206ENST00000487299 WDR97A6NE52 1622 aa17.87■□□□□ 0.45
DPPA4-206ENST00000487299 CLASP1Q7Z460 1538 aa17.85■□□□□ 0.45
DPPA4-206ENST00000487299 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
DPPA4-206ENST00000487299 MAGI1Q96QZ7 1491 aaPredicted RBP17.81■□□□□ 0.44
DPPA4-206ENST00000487299 SYNJ2O15056 1496 aa17.76■□□□□ 0.43
DPPA4-206ENST00000487299 SYNJ1O43426 1573 aa17.75■□□□□ 0.43
DPPA4-206ENST00000487299 PBRM1Q86U86 1689 aa17.75■□□□□ 0.43
DPPA4-206ENST00000487299 CHMP7Q8WUX9 453 aaPredicted RBP17.75■□□□□ 0.43
DPPA4-206ENST00000487299 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
DPPA4-206ENST00000487299 ABCA10Q8WWZ4 1543 aa17.74■□□□□ 0.43
DPPA4-206ENST00000487299 ABCA5Q8WWZ7 1642 aa17.74■□□□□ 0.43
DPPA4-206ENST00000487299 SUPT5HO00267 1087 aaKnown RBP17.73■□□□□ 0.43
DPPA4-206ENST00000487299 DCAF8L1A6NGE4 600 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms