RNA–Protein interactions for RNA: ENST00000487223.5

CAPN2-209, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 2,991 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-209ENST00000487223 NISCHQ9Y2I1 1504 aa15.97■□□□□ 0.15
CAPN2-209ENST00000487223 CCDC180Q9P1Z9 1646 aa14.88□□□□□ -0.03
CAPN2-209ENST00000487223 MYO15BQ96JP2 1530 aa14.02□□□□□ -0.16
CAPN2-209ENST00000487223 ABCC9O60706 1549 aa13.97□□□□□ -0.17
CAPN2-209ENST00000487223 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
CAPN2-209ENST00000487223 NACADO15069 1562 aa13.91□□□□□ -0.18
CAPN2-209ENST00000487223 SHROOM4Q9ULL8 1493 aa13.88□□□□□ -0.19
CAPN2-209ENST00000487223 CHIC1Q5VXU3 224 aa13.76□□□□□ -0.21
CAPN2-209ENST00000487223 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
CAPN2-209ENST00000487223 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
CAPN2-209ENST00000487223 UNC13AQ9UPW8 1703 aa13.47□□□□□ -0.25
CAPN2-209ENST00000487223 BICRAQ9NZM4 1560 aa13.36□□□□□ -0.27
CAPN2-209ENST00000487223 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
CAPN2-209ENST00000487223 EIF4G1Q04637 1599 aaKnown RBP13□□□□□ -0.33
CAPN2-209ENST00000487223 CC2D2AQ9P2K1 1620 aa12.98□□□□□ -0.33
CAPN2-209ENST00000487223 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
CAPN2-209ENST00000487223 CECR2Q9BXF3 1484 aa12.85□□□□□ -0.35
CAPN2-209ENST00000487223 CUX2O14529 1486 aa12.78□□□□□ -0.36
CAPN2-209ENST00000487223 SCRIBQ14160 1630 aa12.77□□□□□ -0.36
CAPN2-209ENST00000487223 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
CAPN2-209ENST00000487223 SMARCA2P51531 1590 aa12.74□□□□□ -0.37
CAPN2-209ENST00000487223 PEG3Q9GZU2 1588 aa12.73□□□□□ -0.37
CAPN2-209ENST00000487223 NCAPD3P42695 1498 aa12.69□□□□□ -0.38
CAPN2-209ENST00000487223 PABPN1Q86U42 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
CAPN2-209ENST00000487223 SMARCA4P51532 1647 aa12.52□□□□□ -0.41
CAPN2-209ENST00000487223 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.41
CAPN2-209ENST00000487223 BAZ1AQ9NRL2 1556 aaPredicted RBP12.51□□□□□ -0.41
CAPN2-209ENST00000487223 ATAD2BQ9ULI0 1458 aa12.45□□□□□ -0.42
CAPN2-209ENST00000487223 THOC2Q8NI27 1593 aaKnown RBP12.42□□□□□ -0.42
CAPN2-209ENST00000487223 PHF23Q9BUL5 403 aaPredicted RBP12.39□□□□□ -0.43
CAPN2-209ENST00000487223 DNAJC5Q9H3Z4 198 aa12.39□□□□□ -0.43
CAPN2-209ENST00000487223 DCAF8L2P0C7V8 631 aa12.35□□□□□ -0.43
CAPN2-209ENST00000487223 PRDM2Q13029 1718 aa12.31□□□□□ -0.44
CAPN2-209ENST00000487223 WDR62O43379 1518 aa12.28□□□□□ -0.44
CAPN2-209ENST00000487223 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.44
CAPN2-209ENST00000487223 PDS5BQ9NTI5 1447 aa12.24□□□□□ -0.45
CAPN2-209ENST00000487223 ERCC6Q03468 1493 aa12.22□□□□□ -0.45
CAPN2-209ENST00000487223 WDR97A6NE52 1622 aa12.2□□□□□ -0.46
CAPN2-209ENST00000487223 MRC2Q9UBG0 1479 aa12.17□□□□□ -0.46
CAPN2-209ENST00000487223 KIF21AQ7Z4S6 1674 aa12.15□□□□□ -0.46
CAPN2-209ENST00000487223 CADPSQ9ULU8 1353 aa12.09□□□□□ -0.47
CAPN2-209ENST00000487223 TOP2AP11388 1531 aaKnown RBP12.08□□□□□ -0.48
CAPN2-209ENST00000487223 ABCC8Q09428 1581 aa12.06□□□□□ -0.48
CAPN2-209ENST00000487223 MROH2BQ7Z745 1585 aa12.05□□□□□ -0.48
CAPN2-209ENST00000487223 CFTRP13569 1480 aa12.05□□□□□ -0.48
CAPN2-209ENST00000487223 CEP164Q9UPV0 1460 aa12□□□□□ -0.49
CAPN2-209ENST00000487223 NESP48681 1621 aa11.95□□□□□ -0.5
CAPN2-209ENST00000487223 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
CAPN2-209ENST00000487223 FANCD2Q9BXW9 1451 aa11.9□□□□□ -0.5
CAPN2-209ENST00000487223 WIZO95785 1651 aa11.89□□□□□ -0.51
CAPN2-209ENST00000487223 DNMBPQ6XZF7 1577 aa11.85□□□□□ -0.51
CAPN2-209ENST00000487223 URB2Q14146 1524 aaKnown RBP11.8□□□□□ -0.52
CAPN2-209ENST00000487223 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
CAPN2-209ENST00000487223 TARBP1Q13395 1621 aaKnown RBP11.77□□□□□ -0.53
CAPN2-209ENST00000487223 TOPBP1Q92547 1522 aa11.72□□□□□ -0.53
CAPN2-209ENST00000487223 RIMBP3CA6NJZ7 1639 aa11.72□□□□□ -0.53
CAPN2-209ENST00000487223 RIMBP3BA6NNM3 1639 aa11.72□□□□□ -0.53
CAPN2-209ENST00000487223 RIMBP3Q9UFD9 1639 aa11.72□□□□□ -0.53
CAPN2-209ENST00000487223 EIF4G3O43432 1585 aaKnown RBP11.71□□□□□ -0.53
CAPN2-209ENST00000487223 CLASP1Q7Z460 1538 aa11.69□□□□□ -0.54
CAPN2-209ENST00000487223 MAGI1Q96QZ7 1491 aaPredicted RBP11.67□□□□□ -0.54
CAPN2-209ENST00000487223 CCDC88BA6NC98 1476 aa11.64□□□□□ -0.55
CAPN2-209ENST00000487223 OSCARQ8IYS5 282 aa11.63□□□□□ -0.55
CAPN2-209ENST00000487223 SYNJ1O43426 1573 aa11.63□□□□□ -0.55
CAPN2-209ENST00000487223 CHD1O14646 1710 aa11.62□□□□□ -0.55
CAPN2-209ENST00000487223 ARHGEF11O15085 1522 aa11.61□□□□□ -0.55
CAPN2-209ENST00000487223 ABCA5Q8WWZ7 1642 aa11.57□□□□□ -0.56
CAPN2-209ENST00000487223 PBRM1Q86U86 1689 aa11.56□□□□□ -0.56
CAPN2-209ENST00000487223 SHROOM2Q13796 1616 aa11.55□□□□□ -0.56
CAPN2-209ENST00000487223 BIVM-ERCC5R4GMW8 1640 aa11.55□□□□□ -0.56
CAPN2-209ENST00000487223 POLA1P09884 1462 aaPredicted RBP11.53□□□□□ -0.56
CAPN2-209ENST00000487223 GRIN2BQ13224 1484 aa11.52□□□□□ -0.57
CAPN2-209ENST00000487223 ABCA10Q8WWZ4 1543 aa11.52□□□□□ -0.57
CAPN2-209ENST00000487223 SYNJ2O15056 1496 aa11.51□□□□□ -0.57
CAPN2-209ENST00000487223 ERICH3Q5RHP9 1530 aa11.47□□□□□ -0.57
CAPN2-209ENST00000487223 ZNF608Q9ULD9 1512 aaPredicted RBP11.46□□□□□ -0.58
CAPN2-209ENST00000487223 ARAP1Q96P48 1450 aa11.46□□□□□ -0.58
CAPN2-209ENST00000487223 ADAMTS12P58397 1594 aa11.44□□□□□ -0.58
CAPN2-209ENST00000487223 PLPPR3Q6T4P5 718 aa11.43□□□□□ -0.58
CAPN2-209ENST00000487223 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
CAPN2-209ENST00000487223 CUX1P39880 1505 aa11.42□□□□□ -0.58
CAPN2-209ENST00000487223 NUP160Q12769 1436 aa11.41□□□□□ -0.58
CAPN2-209ENST00000487223 FGD5Q6ZNL6 1462 aa11.4□□□□□ -0.59
CAPN2-209ENST00000487223 SOGA1O94964 1423 aa11.38□□□□□ -0.59
CAPN2-209ENST00000487223 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
CAPN2-209ENST00000487223 CUL7Q14999 1698 aa11.34□□□□□ -0.59
CAPN2-209ENST00000487223 MAPKBP1O60336 1514 aa11.34□□□□□ -0.59
CAPN2-209ENST00000487223 GAPVD1Q14C86 1478 aa11.33□□□□□ -0.6
CAPN2-209ENST00000487223 FHAD1B1AJZ9 1412 aa11.32□□□□□ -0.6
CAPN2-209ENST00000487223 GRIN2AQ12879 1464 aa11.31□□□□□ -0.6
CAPN2-209ENST00000487223 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
CAPN2-209ENST00000487223 AQRO60306 1485 aaKnown RBP eCLIP11.27□□□□□ -0.65e-7■■■■□ 20
CAPN2-209ENST00000487223 CEP170Q5SW79 1584 aa11.27□□□□□ -0.6
CAPN2-209ENST00000487223 WRNQ14191 1432 aaPredicted RBP eCLIP11.27□□□□□ -0.61
CAPN2-209ENST00000487223 RUSC2Q8N2Y8 1516 aa11.27□□□□□ -0.61
CAPN2-209ENST00000487223 SENP3Q9H4L4 574 aaPredicted RBP11.26□□□□□ -0.61
CAPN2-209ENST00000487223 GLI2P10070 1586 aa11.26□□□□□ -0.61
CAPN2-209ENST00000487223 RAD54L2Q9Y4B4 1467 aa11.22□□□□□ -0.61
CAPN2-209ENST00000487223 SLC24A1O60721 1099 aa11.22□□□□□ -0.61
CAPN2-209ENST00000487223 KIF13AQ9H1H9 1805 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms