RNA–Protein interactions for RNA: ENST00000487000.1

LRRC27-211, Transcript of leucine rich repeat containing 27, humanhuman

TSL 3

Gene LRRC27, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC27-211ENST00000487000 NISCHQ9Y2I1 1504 aa24.32■■□□□ 1.48
LRRC27-211ENST00000487000 CCDC180Q9P1Z9 1646 aa21.72■■□□□ 1.07
LRRC27-211ENST00000487000 ABCC9O60706 1549 aa21.09■□□□□ 0.97
LRRC27-211ENST00000487000 RB1CC1Q8TDY2 1594 aa20.41■□□□□ 0.86
LRRC27-211ENST00000487000 NACADO15069 1562 aa20.4■□□□□ 0.86
LRRC27-211ENST00000487000 MYO15BQ96JP2 1530 aa20.34■□□□□ 0.85
LRRC27-211ENST00000487000 ZCCHC6Q5VYS8 1495 aaKnown RBP20.27■□□□□ 0.84
LRRC27-211ENST00000487000 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
LRRC27-211ENST00000487000 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
LRRC27-211ENST00000487000 UNC13AQ9UPW8 1703 aa19.9■□□□□ 0.78
LRRC27-211ENST00000487000 BICRAQ9NZM4 1560 aa19.74■□□□□ 0.75
LRRC27-211ENST00000487000 SHROOM4Q9ULL8 1493 aa19.69■□□□□ 0.74
LRRC27-211ENST00000487000 SCRIBQ14160 1630 aa19.67■□□□□ 0.74
LRRC27-211ENST00000487000 PABPN1Q86U42 306 aaKnown RBP eCLIP19.65■□□□□ 0.74
LRRC27-211ENST00000487000 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
LRRC27-211ENST00000487000 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
LRRC27-211ENST00000487000 CC2D2AQ9P2K1 1620 aa19.14■□□□□ 0.65
LRRC27-211ENST00000487000 CECR2Q9BXF3 1484 aa19■□□□□ 0.63
LRRC27-211ENST00000487000 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
LRRC27-211ENST00000487000 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
LRRC27-211ENST00000487000 NCAPD3P42695 1498 aa18.8■□□□□ 0.6
LRRC27-211ENST00000487000 SMARCA2P51531 1590 aa18.8■□□□□ 0.6
LRRC27-211ENST00000487000 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.59
LRRC27-211ENST00000487000 PEG3Q9GZU2 1588 aa18.76■□□□□ 0.59
LRRC27-211ENST00000487000 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
LRRC27-211ENST00000487000 MROH2BQ7Z745 1585 aa18.69■□□□□ 0.58
LRRC27-211ENST00000487000 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
LRRC27-211ENST00000487000 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
LRRC27-211ENST00000487000 WIZO95785 1651 aa18.48■□□□□ 0.55
LRRC27-211ENST00000487000 TOP2AP11388 1531 aaKnown RBP18.36■□□□□ 0.53
LRRC27-211ENST00000487000 LAMC3Q9Y6N6 1575 aa18.33■□□□□ 0.52
LRRC27-211ENST00000487000 NESP48681 1621 aa18.23■□□□□ 0.51
LRRC27-211ENST00000487000 ERCC6Q03468 1493 aa18.23■□□□□ 0.51
LRRC27-211ENST00000487000 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
LRRC27-211ENST00000487000 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
LRRC27-211ENST00000487000 CFTRP13569 1480 aa18.13■□□□□ 0.49
LRRC27-211ENST00000487000 CUX2O14529 1486 aa18.12■□□□□ 0.49
LRRC27-211ENST00000487000 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
LRRC27-211ENST00000487000 CCDC88BA6NC98 1476 aa18.08■□□□□ 0.49
LRRC27-211ENST00000487000 THOC2Q8NI27 1593 aaKnown RBP18.05■□□□□ 0.48
LRRC27-211ENST00000487000 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
LRRC27-211ENST00000487000 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
LRRC27-211ENST00000487000 CEP164Q9UPV0 1460 aa18■□□□□ 0.47
LRRC27-211ENST00000487000 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
LRRC27-211ENST00000487000 WDR62O43379 1518 aa17.94■□□□□ 0.46
LRRC27-211ENST00000487000 SUPT5HO00267 1087 aaKnown RBP17.92■□□□□ 0.46
LRRC27-211ENST00000487000 URB2Q14146 1524 aaKnown RBP17.8■□□□□ 0.44
LRRC27-211ENST00000487000 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
LRRC27-211ENST00000487000 DNMBPQ6XZF7 1577 aa17.72■□□□□ 0.43
LRRC27-211ENST00000487000 TOPBP1Q92547 1522 aa17.71■□□□□ 0.43
LRRC27-211ENST00000487000 IFT140Q96RY7 1462 aa17.64■□□□□ 0.41
LRRC27-211ENST00000487000 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
LRRC27-211ENST00000487000 CUX1P39880 1505 aa17.55■□□□□ 0.4
LRRC27-211ENST00000487000 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
LRRC27-211ENST00000487000 WDR97A6NE52 1622 aa17.51■□□□□ 0.39
LRRC27-211ENST00000487000 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
LRRC27-211ENST00000487000 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
LRRC27-211ENST00000487000 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
LRRC27-211ENST00000487000 SOGA1O94964 1423 aa17.47■□□□□ 0.39
LRRC27-211ENST00000487000 EIF4G3O43432 1585 aaKnown RBP17.46■□□□□ 0.39
LRRC27-211ENST00000487000 TOP2BQ02880 1626 aa17.45■□□□□ 0.38
LRRC27-211ENST00000487000 BIVM-ERCC5R4GMW8 1640 aa17.45■□□□□ 0.38
LRRC27-211ENST00000487000 WRNQ14191 1432 aaPredicted RBP eCLIP17.45■□□□□ 0.38
LRRC27-211ENST00000487000 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
LRRC27-211ENST00000487000 SYNJ1O43426 1573 aa17.38■□□□□ 0.37
LRRC27-211ENST00000487000 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
LRRC27-211ENST00000487000 AQRO60306 1485 aaKnown RBP eCLIP17.37■□□□□ 0.37
LRRC27-211ENST00000487000 TDRD9Q8NDG6 1382 aaKnown RBP17.32■□□□□ 0.36
LRRC27-211ENST00000487000 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
LRRC27-211ENST00000487000 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
LRRC27-211ENST00000487000 OSCARQ8IYS5 282 aa17.29■□□□□ 0.36
LRRC27-211ENST00000487000 GAPVD1Q14C86 1478 aa17.29■□□□□ 0.36
LRRC27-211ENST00000487000 MAGI1Q96QZ7 1491 aaPredicted RBP17.29■□□□□ 0.36
LRRC27-211ENST00000487000 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
LRRC27-211ENST00000487000 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
LRRC27-211ENST00000487000 CHD1O14646 1710 aa17.24■□□□□ 0.35
LRRC27-211ENST00000487000 SYNJ2O15056 1496 aa17.2■□□□□ 0.34
LRRC27-211ENST00000487000 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
LRRC27-211ENST00000487000 ADAMTS12P58397 1594 aa17.14■□□□□ 0.33
LRRC27-211ENST00000487000 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
LRRC27-211ENST00000487000 FBLN2P98095 1184 aa17.11■□□□□ 0.33
LRRC27-211ENST00000487000 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
LRRC27-211ENST00000487000 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
LRRC27-211ENST00000487000 CLASP1Q7Z460 1538 aa17.08■□□□□ 0.32
LRRC27-211ENST00000487000 GRIN2AQ12879 1464 aa17.08■□□□□ 0.32
LRRC27-211ENST00000487000 CUL7Q14999 1698 aa17.04■□□□□ 0.32
LRRC27-211ENST00000487000 ARHGEF11O15085 1522 aa17.02■□□□□ 0.32
LRRC27-211ENST00000487000 RIMBP3CA6NJZ7 1639 aa17.02■□□□□ 0.31
LRRC27-211ENST00000487000 RIMBP3BA6NNM3 1639 aa17.02■□□□□ 0.31
LRRC27-211ENST00000487000 RIMBP3Q9UFD9 1639 aa17.02■□□□□ 0.31
LRRC27-211ENST00000487000 NUP160Q12769 1436 aa17.02■□□□□ 0.31
LRRC27-211ENST00000487000 IGF1RP08069 1367 aa17■□□□□ 0.31
LRRC27-211ENST00000487000 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
LRRC27-211ENST00000487000 TRIM41Q8WV44 630 aa16.96■□□□□ 0.31
LRRC27-211ENST00000487000 CHIC1Q5VXU3 224 aa16.91■□□□□ 0.3
LRRC27-211ENST00000487000 SHROOM2Q13796 1616 aa16.91■□□□□ 0.3
LRRC27-211ENST00000487000 CARMIL1Q5VZK9 1371 aa16.9■□□□□ 0.3
LRRC27-211ENST00000487000 RUSC2Q8N2Y8 1516 aa16.89■□□□□ 0.29
LRRC27-211ENST00000487000 ARAP1Q96P48 1450 aa16.87■□□□□ 0.29
LRRC27-211ENST00000487000 KIAA0586Q9BVV6 1533 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms