RNA–Protein interactions for RNA: ENST00000486927.1

ATL2-215, Transcript of atlastin GTPase 2, humanhuman

TSL 4

Gene ATL2, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-215ENST00000486927 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
ATL2-215ENST00000486927 ABCC9O60706 1549 aa29.26■■■□□ 2.27
ATL2-215ENST00000486927 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
ATL2-215ENST00000486927 DNAJC5BQ9UF47 199 aa27.9■■■□□ 2.06
ATL2-215ENST00000486927 RB1CC1Q8TDY2 1594 aa27.67■■■□□ 2.02
ATL2-215ENST00000486927 NACADO15069 1562 aa27.48■■□□□ 1.99
ATL2-215ENST00000486927 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
ATL2-215ENST00000486927 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.97
ATL2-215ENST00000486927 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
ATL2-215ENST00000486927 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
ATL2-215ENST00000486927 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
ATL2-215ENST00000486927 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
ATL2-215ENST00000486927 ZCCHC6Q5VYS8 1495 aaKnown RBP26.63■■□□□ 1.85
ATL2-215ENST00000486927 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
ATL2-215ENST00000486927 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
ATL2-215ENST00000486927 CC2D2AQ9P2K1 1620 aa26.35■■□□□ 1.81
ATL2-215ENST00000486927 SCRIBQ14160 1630 aa26.29■■□□□ 1.8
ATL2-215ENST00000486927 EIF4G1Q04637 1599 aaKnown RBP26.25■■□□□ 1.79
ATL2-215ENST00000486927 DNAJC5Q9H3Z4 198 aa25.8■■□□□ 1.72
ATL2-215ENST00000486927 NCAPD3P42695 1498 aa25.52■■□□□ 1.68
ATL2-215ENST00000486927 ATAD2BQ9ULI0 1458 aa25.34■■□□□ 1.65
ATL2-215ENST00000486927 CUX2O14529 1486 aa25.33■■□□□ 1.65
ATL2-215ENST00000486927 ERCC6Q03468 1493 aa25.25■■□□□ 1.63
ATL2-215ENST00000486927 SMARCA2P51531 1590 aa25.15■■□□□ 1.62
ATL2-215ENST00000486927 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
ATL2-215ENST00000486927 SMARCA4P51532 1647 aa25.09■■□□□ 1.61
ATL2-215ENST00000486927 NESP48681 1621 aa25.08■■□□□ 1.6
ATL2-215ENST00000486927 BAZ1BQ9UIG0 1483 aaKnown RBP25■■□□□ 1.59
ATL2-215ENST00000486927 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
ATL2-215ENST00000486927 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
ATL2-215ENST00000486927 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
ATL2-215ENST00000486927 PDS5BQ9NTI5 1447 aa24.79■■□□□ 1.56
ATL2-215ENST00000486927 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
ATL2-215ENST00000486927 CADPSQ9ULU8 1353 aa24.74■■□□□ 1.55
ATL2-215ENST00000486927 THOC2Q8NI27 1593 aaKnown RBP24.72■■□□□ 1.55
ATL2-215ENST00000486927 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
ATL2-215ENST00000486927 KIF21AQ7Z4S6 1674 aa24.51■■□□□ 1.51
ATL2-215ENST00000486927 TRIM41Q8WV44 630 aa24.43■■□□□ 1.5
ATL2-215ENST00000486927 WDR62O43379 1518 aa24.42■■□□□ 1.5
ATL2-215ENST00000486927 WIZO95785 1651 aa24.42■■□□□ 1.5
ATL2-215ENST00000486927 CFTRP13569 1480 aa24.35■■□□□ 1.49
ATL2-215ENST00000486927 FANCD2Q9BXW9 1451 aa24.34■■□□□ 1.49
ATL2-215ENST00000486927 CEP164Q9UPV0 1460 aa24.34■■□□□ 1.49
ATL2-215ENST00000486927 RSF1Q96T23 1441 aaPredicted RBP24.34■■□□□ 1.49
ATL2-215ENST00000486927 OSCARQ8IYS5 282 aa24.32■■□□□ 1.48
ATL2-215ENST00000486927 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
ATL2-215ENST00000486927 TOP2AP11388 1531 aaKnown RBP24.13■■□□□ 1.45
ATL2-215ENST00000486927 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
ATL2-215ENST00000486927 IFT140Q96RY7 1462 aa23.93■■□□□ 1.42
ATL2-215ENST00000486927 ZNF608Q9ULD9 1512 aaPredicted RBP23.91■■□□□ 1.42
ATL2-215ENST00000486927 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
ATL2-215ENST00000486927 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
ATL2-215ENST00000486927 CYB5RLQ6IPT4 315 aa23.73■■□□□ 1.39
ATL2-215ENST00000486927 RIMBP3CA6NJZ7 1639 aa23.73■■□□□ 1.39
ATL2-215ENST00000486927 RIMBP3BA6NNM3 1639 aa23.73■■□□□ 1.39
ATL2-215ENST00000486927 RIMBP3Q9UFD9 1639 aa23.73■■□□□ 1.39
ATL2-215ENST00000486927 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.39
ATL2-215ENST00000486927 ARHGEF11O15085 1522 aa23.71■■□□□ 1.39
ATL2-215ENST00000486927 DNMBPQ6XZF7 1577 aa23.66■■□□□ 1.38
ATL2-215ENST00000486927 PRDM2Q13029 1718 aa23.66■■□□□ 1.38
ATL2-215ENST00000486927 FBLN2P98095 1184 aa23.63■■□□□ 1.37
ATL2-215ENST00000486927 POLA1P09884 1462 aaPredicted RBP23.59■■□□□ 1.37
ATL2-215ENST00000486927 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
ATL2-215ENST00000486927 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
ATL2-215ENST00000486927 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
ATL2-215ENST00000486927 SOGA1O94964 1423 aa23.57■■□□□ 1.36
ATL2-215ENST00000486927 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
ATL2-215ENST00000486927 TRHP20396 242 aaPredicted RBP23.49■■□□□ 1.35
ATL2-215ENST00000486927 ARAP1Q96P48 1450 aa23.48■■□□□ 1.35
ATL2-215ENST00000486927 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
ATL2-215ENST00000486927 FGD5Q6ZNL6 1462 aa23.38■■□□□ 1.33
ATL2-215ENST00000486927 CHD1O14646 1710 aa23.37■■□□□ 1.33
ATL2-215ENST00000486927 SNAPC4Q5SXM2 1469 aa23.36■■□□□ 1.33
ATL2-215ENST00000486927 CUX1P39880 1505 aa23.33■■□□□ 1.32
ATL2-215ENST00000486927 GRIN2BQ13224 1484 aa23.32■■□□□ 1.32
ATL2-215ENST00000486927 MAGI1Q96QZ7 1491 aaPredicted RBP23.31■■□□□ 1.32
ATL2-215ENST00000486927 WDR97A6NE52 1622 aa23.3■■□□□ 1.32
ATL2-215ENST00000486927 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
ATL2-215ENST00000486927 SYNJ2O15056 1496 aa23.27■■□□□ 1.32
ATL2-215ENST00000486927 GAPVD1Q14C86 1478 aa23.21■■□□□ 1.31
ATL2-215ENST00000486927 SYNJ1O43426 1573 aa23.21■■□□□ 1.31
ATL2-215ENST00000486927 ABCA10Q8WWZ4 1543 aa23.14■■□□□ 1.3
ATL2-215ENST00000486927 SUPT5HO00267 1087 aaKnown RBP23.1■■□□□ 1.29
ATL2-215ENST00000486927 WRNQ14191 1432 aaPredicted RBP eCLIP23.06■■□□□ 1.28
ATL2-215ENST00000486927 GRIN2AQ12879 1464 aa22.99■■□□□ 1.27
ATL2-215ENST00000486927 ABCA5Q8WWZ7 1642 aa22.99■■□□□ 1.27
ATL2-215ENST00000486927 NUP160Q12769 1436 aa22.99■■□□□ 1.27
ATL2-215ENST00000486927 AEBP2Q6ZN18 517 aaPredicted RBP22.96■■□□□ 1.27
ATL2-215ENST00000486927 FHAD1B1AJZ9 1412 aa22.93■■□□□ 1.26
ATL2-215ENST00000486927 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
ATL2-215ENST00000486927 ERCC6L2Q5T890 1561 aa22.91■■□□□ 1.26
ATL2-215ENST00000486927 JPH4Q96JJ6 628 aa22.88■■□□□ 1.25
ATL2-215ENST00000486927 CEP170Q5SW79 1584 aa22.86■■□□□ 1.25
ATL2-215ENST00000486927 TOP2BQ02880 1626 aa22.84■■□□□ 1.25
ATL2-215ENST00000486927 ADAMTS12P58397 1594 aa22.83■■□□□ 1.25
ATL2-215ENST00000486927 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
ATL2-215ENST00000486927 PRG4Q92954 1404 aaPredicted RBP22.79■■□□□ 1.24
ATL2-215ENST00000486927 SHROOM2Q13796 1616 aa22.77■■□□□ 1.24
ATL2-215ENST00000486927 BIVM-ERCC5R4GMW8 1640 aa22.76■■□□□ 1.23
ATL2-215ENST00000486927 NPM1P06748 294 aaKnown RBP eCLIP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms