RNA–Protein interactions for RNA: ENST00000486725.1

RYK-207, Transcript of receptor-like tyrosine kinase, humanhuman

TSL 2

Gene RYK, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RYK-207ENST00000486725 NISCHQ9Y2I1 1504 aa26.19■■□□□ 1.78
RYK-207ENST00000486725 ABCC9O60706 1549 aa23.59■■□□□ 1.37
RYK-207ENST00000486725 CCDC180Q9P1Z9 1646 aa23.57■■□□□ 1.36
RYK-207ENST00000486725 RB1CC1Q8TDY2 1594 aa22.43■■□□□ 1.18
RYK-207ENST00000486725 NACADO15069 1562 aa22.26■■□□□ 1.15
RYK-207ENST00000486725 DNAJC5BQ9UF47 199 aa22.17■■□□□ 1.14
RYK-207ENST00000486725 DCAF8L2P0C7V8 631 aa22.06■■□□□ 1.12
RYK-207ENST00000486725 UNC13AQ9UPW8 1703 aa22.01■■□□□ 1.11
RYK-207ENST00000486725 MYO15BQ96JP2 1530 aa21.93■■□□□ 1.1
RYK-207ENST00000486725 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.1
RYK-207ENST00000486725 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
RYK-207ENST00000486725 ZCCHC6Q5VYS8 1495 aaKnown RBP21.71■■□□□ 1.07
RYK-207ENST00000486725 DCAF1Q9Y4B6 1507 aa21.63■■□□□ 1.05
RYK-207ENST00000486725 SHROOM4Q9ULL8 1493 aa21.47■■□□□ 1.03
RYK-207ENST00000486725 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
RYK-207ENST00000486725 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1.01
RYK-207ENST00000486725 EIF4G1Q04637 1599 aaKnown RBP21.27■■□□□ 1
RYK-207ENST00000486725 CECR2Q9BXF3 1484 aa21.25■□□□□ 0.99
RYK-207ENST00000486725 AEBP2Q6ZN18 517 aaPredicted RBP20.57■□□□□ 0.88
RYK-207ENST00000486725 NCAPD3P42695 1498 aa20.54■□□□□ 0.88
RYK-207ENST00000486725 ATAD2BQ9ULI0 1458 aa20.48■□□□□ 0.87
RYK-207ENST00000486725 SMARCA4P51532 1647 aa20.47■□□□□ 0.87
RYK-207ENST00000486725 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
RYK-207ENST00000486725 HMGXB3Q12766 1538 aa20.41■□□□□ 0.86
RYK-207ENST00000486725 DNAJC5Q9H3Z4 198 aa20.37■□□□□ 0.85
RYK-207ENST00000486725 ERCC6Q03468 1493 aa20.36■□□□□ 0.85
RYK-207ENST00000486725 CUX2O14529 1486 aa20.35■□□□□ 0.85
RYK-207ENST00000486725 BAZ1AQ9NRL2 1556 aaPredicted RBP20.34■□□□□ 0.85
RYK-207ENST00000486725 PEG3Q9GZU2 1588 aa20.27■□□□□ 0.84
RYK-207ENST00000486725 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.84
RYK-207ENST00000486725 NESP48681 1621 aa20.27■□□□□ 0.83
RYK-207ENST00000486725 MROH2BQ7Z745 1585 aa20.2■□□□□ 0.82
RYK-207ENST00000486725 THOC2Q8NI27 1593 aaKnown RBP20.11■□□□□ 0.81
RYK-207ENST00000486725 LAMC3Q9Y6N6 1575 aa20.11■□□□□ 0.81
RYK-207ENST00000486725 KIF21AQ7Z4S6 1674 aa20.04■□□□□ 0.8
RYK-207ENST00000486725 WIZO95785 1651 aa19.97■□□□□ 0.79
RYK-207ENST00000486725 PDS5BQ9NTI5 1447 aa19.95■□□□□ 0.78
RYK-207ENST00000486725 CADPSQ9ULU8 1353 aa19.9■□□□□ 0.78
RYK-207ENST00000486725 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
RYK-207ENST00000486725 MRC2Q9UBG0 1479 aa19.82■□□□□ 0.76
RYK-207ENST00000486725 WDR62O43379 1518 aa19.79■□□□□ 0.76
RYK-207ENST00000486725 RSF1Q96T23 1441 aaPredicted RBP19.74■□□□□ 0.75
RYK-207ENST00000486725 CEP164Q9UPV0 1460 aa19.72■□□□□ 0.75
RYK-207ENST00000486725 FANCD2Q9BXW9 1451 aa19.69■□□□□ 0.74
RYK-207ENST00000486725 TOP2AP11388 1531 aaKnown RBP19.69■□□□□ 0.74
RYK-207ENST00000486725 CFTRP13569 1480 aa19.68■□□□□ 0.74
RYK-207ENST00000486725 PRDM2Q13029 1718 aa19.56■□□□□ 0.72
RYK-207ENST00000486725 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
RYK-207ENST00000486725 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
RYK-207ENST00000486725 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
RYK-207ENST00000486725 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
RYK-207ENST00000486725 TOPBP1Q92547 1522 aa19.32■□□□□ 0.68
RYK-207ENST00000486725 ZNF608Q9ULD9 1512 aaPredicted RBP19.32■□□□□ 0.68
RYK-207ENST00000486725 IFT140Q96RY7 1462 aa19.32■□□□□ 0.68
RYK-207ENST00000486725 DNMBPQ6XZF7 1577 aa19.26■□□□□ 0.67
RYK-207ENST00000486725 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
RYK-207ENST00000486725 EIF4G3O43432 1585 aaKnown RBP19.23■□□□□ 0.67
RYK-207ENST00000486725 RIMBP3CA6NJZ7 1639 aa19.21■□□□□ 0.67
RYK-207ENST00000486725 RIMBP3BA6NNM3 1639 aa19.21■□□□□ 0.67
RYK-207ENST00000486725 RIMBP3Q9UFD9 1639 aa19.21■□□□□ 0.67
RYK-207ENST00000486725 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
RYK-207ENST00000486725 CHD1O14646 1710 aa19.13■□□□□ 0.65
RYK-207ENST00000486725 ARHGEF11O15085 1522 aa19.12■□□□□ 0.65
RYK-207ENST00000486725 POLA1P09884 1462 aaPredicted RBP19.12■□□□□ 0.65
RYK-207ENST00000486725 AQRO60306 1485 aaKnown RBP eCLIP19.11■□□□□ 0.65
RYK-207ENST00000486725 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
RYK-207ENST00000486725 SOGA1O94964 1423 aa19■□□□□ 0.63
RYK-207ENST00000486725 FGD5Q6ZNL6 1462 aa18.99■□□□□ 0.63
RYK-207ENST00000486725 CUX1P39880 1505 aa18.99■□□□□ 0.63
RYK-207ENST00000486725 TDRD9Q8NDG6 1382 aaKnown RBP18.97■□□□□ 0.63
RYK-207ENST00000486725 WDR97A6NE52 1622 aa18.96■□□□□ 0.63
RYK-207ENST00000486725 FBLN2P98095 1184 aa18.96■□□□□ 0.63
RYK-207ENST00000486725 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
RYK-207ENST00000486725 ARAP1Q96P48 1450 aa18.93■□□□□ 0.62
RYK-207ENST00000486725 CYB5RLQ6IPT4 315 aa18.92■□□□□ 0.62
RYK-207ENST00000486725 CLASP1Q7Z460 1538 aa18.88■□□□□ 0.61
RYK-207ENST00000486725 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
RYK-207ENST00000486725 GRIN2BQ13224 1484 aa18.85■□□□□ 0.61
RYK-207ENST00000486725 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
RYK-207ENST00000486725 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
RYK-207ENST00000486725 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
RYK-207ENST00000486725 CHMP7Q8WUX9 453 aaPredicted RBP18.8■□□□□ 0.6
RYK-207ENST00000486725 GAPVD1Q14C86 1478 aa18.79■□□□□ 0.6
RYK-207ENST00000486725 ABCA5Q8WWZ7 1642 aa18.78■□□□□ 0.6
RYK-207ENST00000486725 SUPT5HO00267 1087 aaKnown RBP18.77■□□□□ 0.6
RYK-207ENST00000486725 ABCA10Q8WWZ4 1543 aa18.77■□□□□ 0.6
RYK-207ENST00000486725 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
RYK-207ENST00000486725 BIVM-ERCC5R4GMW8 1640 aa18.68■□□□□ 0.58
RYK-207ENST00000486725 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
RYK-207ENST00000486725 ADAMTS12P58397 1594 aa18.65■□□□□ 0.58
RYK-207ENST00000486725 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
RYK-207ENST00000486725 GRIN2AQ12879 1464 aa18.63■□□□□ 0.57
RYK-207ENST00000486725 CEP170Q5SW79 1584 aa18.59■□□□□ 0.57
RYK-207ENST00000486725 ERCC6L2Q5T890 1561 aa18.59■□□□□ 0.57
RYK-207ENST00000486725 NUP160Q12769 1436 aa18.57■□□□□ 0.56
RYK-207ENST00000486725 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
RYK-207ENST00000486725 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
RYK-207ENST00000486725 SHROOM2Q13796 1616 aa18.52■□□□□ 0.56
RYK-207ENST00000486725 RUSC2Q8N2Y8 1516 aa18.39■□□□□ 0.53
RYK-207ENST00000486725 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms