RNA–Protein interactions for RNA: ENST00000486502.1

TNFSF13B-204, Transcript of TNF superfamily member 13b, humanhuman

TSL 5

Gene TNFSF13B, Length 395 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-204ENST00000486502 NISCHQ9Y2I1 1504 aa39.35■■■■□ 3.89
TNFSF13B-204ENST00000486502 ABCC9O60706 1549 aa35.48■■■■□ 3.27
TNFSF13B-204ENST00000486502 CCDC180Q9P1Z9 1646 aa35.19■■■■□ 3.22
TNFSF13B-204ENST00000486502 DCAF8L2P0C7V8 631 aa33.68■■■□□ 2.98
TNFSF13B-204ENST00000486502 RB1CC1Q8TDY2 1594 aa33.64■■■□□ 2.98
TNFSF13B-204ENST00000486502 DNAJC5BQ9UF47 199 aa33.39■■■□□ 2.94
TNFSF13B-204ENST00000486502 NACADO15069 1562 aa33.38■■■□□ 2.93
TNFSF13B-204ENST00000486502 PABPN1Q86U42 306 aaKnown RBP eCLIP33.18■■■□□ 2.9
TNFSF13B-204ENST00000486502 MYO15BQ96JP2 1530 aa32.82■■■□□ 2.84
TNFSF13B-204ENST00000486502 UNC13AQ9UPW8 1703 aa32.77■■■□□ 2.84
TNFSF13B-204ENST00000486502 BICRAQ9NZM4 1560 aa32.59■■■□□ 2.81
TNFSF13B-204ENST00000486502 ZCCHC6Q5VYS8 1495 aaKnown RBP32.53■■■□□ 2.8
TNFSF13B-204ENST00000486502 DCAF1Q9Y4B6 1507 aa32.4■■■□□ 2.78
TNFSF13B-204ENST00000486502 SCRIBQ14160 1630 aa32.21■■■□□ 2.75
TNFSF13B-204ENST00000486502 SHROOM4Q9ULL8 1493 aa32.1■■■□□ 2.73
TNFSF13B-204ENST00000486502 CC2D2AQ9P2K1 1620 aa31.95■■■□□ 2.71
TNFSF13B-204ENST00000486502 CECR2Q9BXF3 1484 aa31.95■■■□□ 2.7
TNFSF13B-204ENST00000486502 EIF4G1Q04637 1599 aaKnown RBP31.85■■■□□ 2.69
TNFSF13B-204ENST00000486502 NCAPD3P42695 1498 aa30.86■■■□□ 2.53
TNFSF13B-204ENST00000486502 ATAD2BQ9ULI0 1458 aa30.76■■■□□ 2.52
TNFSF13B-204ENST00000486502 DNAJC5Q9H3Z4 198 aa30.71■■■□□ 2.51
TNFSF13B-204ENST00000486502 ERCC6Q03468 1493 aa30.68■■■□□ 2.5
TNFSF13B-204ENST00000486502 SMARCA4P51532 1647 aa30.66■■■□□ 2.5
TNFSF13B-204ENST00000486502 SMARCA2P51531 1590 aa30.66■■■□□ 2.5
TNFSF13B-204ENST00000486502 BAZ1AQ9NRL2 1556 aaPredicted RBP30.54■■■□□ 2.48
TNFSF13B-204ENST00000486502 HMGXB3Q12766 1538 aa30.52■■■□□ 2.48
TNFSF13B-204ENST00000486502 CUX2O14529 1486 aa30.5■■■□□ 2.47
TNFSF13B-204ENST00000486502 BAZ1BQ9UIG0 1483 aaKnown RBP30.5■■■□□ 2.47
TNFSF13B-204ENST00000486502 NESP48681 1621 aa30.43■■■□□ 2.46
TNFSF13B-204ENST00000486502 MROH2BQ7Z745 1585 aa30.33■■■□□ 2.45
TNFSF13B-204ENST00000486502 PEG3Q9GZU2 1588 aa30.28■■■□□ 2.44
TNFSF13B-204ENST00000486502 LAMC3Q9Y6N6 1575 aa30.12■■■□□ 2.41
TNFSF13B-204ENST00000486502 PDS5BQ9NTI5 1447 aa30.08■■■□□ 2.41
TNFSF13B-204ENST00000486502 CADPSQ9ULU8 1353 aa30■■■□□ 2.39
TNFSF13B-204ENST00000486502 THOC2Q8NI27 1593 aaKnown RBP29.97■■■□□ 2.39
TNFSF13B-204ENST00000486502 WIZO95785 1651 aa29.96■■■□□ 2.39
TNFSF13B-204ENST00000486502 KIF21AQ7Z4S6 1674 aa29.94■■■□□ 2.38
TNFSF13B-204ENST00000486502 MRC2Q9UBG0 1479 aa29.75■■■□□ 2.35
TNFSF13B-204ENST00000486502 RSF1Q96T23 1441 aaPredicted RBP29.73■■■□□ 2.35
TNFSF13B-204ENST00000486502 CEP164Q9UPV0 1460 aa29.64■■■□□ 2.34
TNFSF13B-204ENST00000486502 FANCD2Q9BXW9 1451 aa29.62■■■□□ 2.33
TNFSF13B-204ENST00000486502 WDR62O43379 1518 aa29.6■■■□□ 2.33
TNFSF13B-204ENST00000486502 CFTRP13569 1480 aa29.55■■■□□ 2.32
TNFSF13B-204ENST00000486502 TOP2AP11388 1531 aaKnown RBP29.54■■■□□ 2.32
TNFSF13B-204ENST00000486502 TRIM41Q8WV44 630 aa29.49■■■□□ 2.31
TNFSF13B-204ENST00000486502 OSCARQ8IYS5 282 aa29.34■■■□□ 2.29
TNFSF13B-204ENST00000486502 URB2Q14146 1524 aaKnown RBP29.33■■■□□ 2.29
TNFSF13B-204ENST00000486502 CCDC88BA6NC98 1476 aa29.31■■■□□ 2.28
TNFSF13B-204ENST00000486502 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
TNFSF13B-204ENST00000486502 IFT140Q96RY7 1462 aa29.06■■■□□ 2.24
TNFSF13B-204ENST00000486502 TOPBP1Q92547 1522 aa29.02■■■□□ 2.24
TNFSF13B-204ENST00000486502 ZNF608Q9ULD9 1512 aaPredicted RBP29.01■■■□□ 2.23
TNFSF13B-204ENST00000486502 ABCC8Q09428 1581 aa28.99■■■□□ 2.23
TNFSF13B-204ENST00000486502 DNMBPQ6XZF7 1577 aa28.87■■■□□ 2.21
TNFSF13B-204ENST00000486502 FBLN2P98095 1184 aa28.85■■■□□ 2.21
TNFSF13B-204ENST00000486502 AQRO60306 1485 aaKnown RBP eCLIP28.83■■■□□ 2.21
TNFSF13B-204ENST00000486502 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
TNFSF13B-204ENST00000486502 RIMBP3CA6NJZ7 1639 aa28.72■■■□□ 2.19
TNFSF13B-204ENST00000486502 RIMBP3BA6NNM3 1639 aa28.72■■■□□ 2.19
TNFSF13B-204ENST00000486502 RIMBP3Q9UFD9 1639 aa28.72■■■□□ 2.19
TNFSF13B-204ENST00000486502 POLA1P09884 1462 aaPredicted RBP28.72■■■□□ 2.19
TNFSF13B-204ENST00000486502 SOGA1O94964 1423 aa28.71■■■□□ 2.19
TNFSF13B-204ENST00000486502 CYB5RLQ6IPT4 315 aa28.7■■■□□ 2.18
TNFSF13B-204ENST00000486502 TARBP1Q13395 1621 aaKnown RBP28.69■■■□□ 2.18
TNFSF13B-204ENST00000486502 RAD54L2Q9Y4B4 1467 aa28.69■■■□□ 2.18
TNFSF13B-204ENST00000486502 TDRD9Q8NDG6 1382 aaKnown RBP28.68■■■□□ 2.18
TNFSF13B-204ENST00000486502 SUPT5HO00267 1087 aaKnown RBP28.68■■■□□ 2.18
TNFSF13B-204ENST00000486502 ARHGEF11O15085 1522 aa28.64■■■□□ 2.18
TNFSF13B-204ENST00000486502 CHMP7Q8WUX9 453 aaPredicted RBP28.57■■■□□ 2.16
TNFSF13B-204ENST00000486502 CHD1O14646 1710 aa28.57■■■□□ 2.16
TNFSF13B-204ENST00000486502 FGD5Q6ZNL6 1462 aa28.55■■■□□ 2.16
TNFSF13B-204ENST00000486502 CUX1P39880 1505 aa28.48■■■□□ 2.15
TNFSF13B-204ENST00000486502 TRHP20396 242 aaPredicted RBP28.46■■■□□ 2.15
TNFSF13B-204ENST00000486502 SNAPC4Q5SXM2 1469 aa28.45■■■□□ 2.14
TNFSF13B-204ENST00000486502 GRIN2BQ13224 1484 aa28.39■■■□□ 2.13
TNFSF13B-204ENST00000486502 ARAP1Q96P48 1450 aa28.35■■■□□ 2.13
TNFSF13B-204ENST00000486502 WDR97A6NE52 1622 aa28.35■■■□□ 2.13
TNFSF13B-204ENST00000486502 MAGI1Q96QZ7 1491 aaPredicted RBP28.34■■■□□ 2.13
TNFSF13B-204ENST00000486502 GAPVD1Q14C86 1478 aa28.3■■■□□ 2.12
TNFSF13B-204ENST00000486502 SYNJ2O15056 1496 aa28.27■■■□□ 2.12
TNFSF13B-204ENST00000486502 SYNJ1O43426 1573 aa28.27■■■□□ 2.12
TNFSF13B-204ENST00000486502 CLASP1Q7Z460 1538 aa28.2■■■□□ 2.1
TNFSF13B-204ENST00000486502 ABCA10Q8WWZ4 1543 aa28.19■■■□□ 2.1
TNFSF13B-204ENST00000486502 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
TNFSF13B-204ENST00000486502 PBRM1Q86U86 1689 aa28.15■■■□□ 2.1
TNFSF13B-204ENST00000486502 ABCA5Q8WWZ7 1642 aa28.07■■■□□ 2.08
TNFSF13B-204ENST00000486502 TOP2BQ02880 1626 aa27.99■■■□□ 2.07
TNFSF13B-204ENST00000486502 GRIN2AQ12879 1464 aa27.98■■■□□ 2.07
TNFSF13B-204ENST00000486502 BIVM-ERCC5R4GMW8 1640 aa27.94■■■□□ 2.06
TNFSF13B-204ENST00000486502 FHAD1B1AJZ9 1412 aa27.93■■■□□ 2.06
TNFSF13B-204ENST00000486502 ADAMTS12P58397 1594 aa27.88■■■□□ 2.05
TNFSF13B-204ENST00000486502 NUP160Q12769 1436 aa27.86■■■□□ 2.05
TNFSF13B-204ENST00000486502 CEP170Q5SW79 1584 aa27.85■■■□□ 2.05
TNFSF13B-204ENST00000486502 ERCC6L2Q5T890 1561 aa27.84■■■□□ 2.05
TNFSF13B-204ENST00000486502 ERICH3Q5RHP9 1530 aa27.82■■■□□ 2.04
TNFSF13B-204ENST00000486502 JPH4Q96JJ6 628 aa27.8■■■□□ 2.04
TNFSF13B-204ENST00000486502 PRG4Q92954 1404 aaPredicted RBP27.74■■■□□ 2.03
TNFSF13B-204ENST00000486502 AEBP2Q6ZN18 517 aaPredicted RBP27.69■■■□□ 2.02
TNFSF13B-204ENST00000486502 SHROOM2Q13796 1616 aa27.67■■■□□ 2.02
TNFSF13B-204ENST00000486502 NPM1P06748 294 aaKnown RBP eCLIP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms