RNA–Protein interactions for RNA: ENST00000486453.1

MR1-207, Transcript of major histocompatibility complex, class I-related, humanhuman

TSL 3

Gene MR1, Length 749 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MR1-207ENST00000486453 NISCHQ9Y2I1 1504 aa27.47■■□□□ 1.99
MR1-207ENST00000486453 CCDC180Q9P1Z9 1646 aa24.78■■□□□ 1.56
MR1-207ENST00000486453 ABCC9O60706 1549 aa24.71■■□□□ 1.55
MR1-207ENST00000486453 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
MR1-207ENST00000486453 NACADO15069 1562 aa23.45■■□□□ 1.34
MR1-207ENST00000486453 DNAJC5BQ9UF47 199 aa23.29■■□□□ 1.32
MR1-207ENST00000486453 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
MR1-207ENST00000486453 DCAF8L2P0C7V8 631 aa23.06■■□□□ 1.28
MR1-207ENST00000486453 UNC13AQ9UPW8 1703 aa23.03■■□□□ 1.28
MR1-207ENST00000486453 PABPN1Q86U42 306 aaKnown RBP eCLIP22.94■■□□□ 1.26
MR1-207ENST00000486453 BICRAQ9NZM4 1560 aa22.88■■□□□ 1.25
MR1-207ENST00000486453 DCAF1Q9Y4B6 1507 aa22.8■■□□□ 1.24
MR1-207ENST00000486453 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
MR1-207ENST00000486453 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
MR1-207ENST00000486453 SCRIBQ14160 1630 aa22.39■■□□□ 1.18
MR1-207ENST00000486453 CC2D2AQ9P2K1 1620 aa22.39■■□□□ 1.17
MR1-207ENST00000486453 CECR2Q9BXF3 1484 aa22.33■■□□□ 1.16
MR1-207ENST00000486453 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.16
MR1-207ENST00000486453 NCAPD3P42695 1498 aa21.64■■□□□ 1.06
MR1-207ENST00000486453 DNAJC5Q9H3Z4 198 aa21.59■■□□□ 1.05
MR1-207ENST00000486453 CUX2O14529 1486 aa21.5■■□□□ 1.03
MR1-207ENST00000486453 ATAD2BQ9ULI0 1458 aa21.5■■□□□ 1.03
MR1-207ENST00000486453 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
MR1-207ENST00000486453 HMGXB3Q12766 1538 aa21.46■■□□□ 1.03
MR1-207ENST00000486453 SMARCA4P51532 1647 aa21.44■■□□□ 1.02
MR1-207ENST00000486453 ERCC6Q03468 1493 aa21.38■■□□□ 1.01
MR1-207ENST00000486453 BAZ1AQ9NRL2 1556 aaPredicted RBP21.36■■□□□ 1.01
MR1-207ENST00000486453 PEG3Q9GZU2 1588 aa21.32■■□□□ 1
MR1-207ENST00000486453 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
MR1-207ENST00000486453 NESP48681 1621 aa21.18■□□□□ 0.98
MR1-207ENST00000486453 LAMC3Q9Y6N6 1575 aa21.17■□□□□ 0.98
MR1-207ENST00000486453 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
MR1-207ENST00000486453 THOC2Q8NI27 1593 aaKnown RBP21.08■□□□□ 0.97
MR1-207ENST00000486453 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
MR1-207ENST00000486453 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
MR1-207ENST00000486453 CADPSQ9ULU8 1353 aa20.94■□□□□ 0.94
MR1-207ENST00000486453 WIZO95785 1651 aa20.83■□□□□ 0.93
MR1-207ENST00000486453 MRC2Q9UBG0 1479 aa20.81■□□□□ 0.92
MR1-207ENST00000486453 WDR62O43379 1518 aa20.79■□□□□ 0.92
MR1-207ENST00000486453 AEBP2Q6ZN18 517 aaPredicted RBP20.73■□□□□ 0.91
MR1-207ENST00000486453 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
MR1-207ENST00000486453 CFTRP13569 1480 aa20.69■□□□□ 0.9
MR1-207ENST00000486453 FANCD2Q9BXW9 1451 aa20.66■□□□□ 0.9
MR1-207ENST00000486453 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
MR1-207ENST00000486453 TOP2AP11388 1531 aaKnown RBP20.63■□□□□ 0.89
MR1-207ENST00000486453 PRDM2Q13029 1718 aa20.51■□□□□ 0.87
MR1-207ENST00000486453 URB2Q14146 1524 aaKnown RBP20.48■□□□□ 0.87
MR1-207ENST00000486453 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
MR1-207ENST00000486453 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
MR1-207ENST00000486453 CCDC88BA6NC98 1476 aa20.36■□□□□ 0.85
MR1-207ENST00000486453 ABCC8Q09428 1581 aa20.33■□□□□ 0.84
MR1-207ENST00000486453 IFT140Q96RY7 1462 aa20.32■□□□□ 0.84
MR1-207ENST00000486453 TOPBP1Q92547 1522 aa20.27■□□□□ 0.83
MR1-207ENST00000486453 ZNF608Q9ULD9 1512 aaPredicted RBP20.21■□□□□ 0.83
MR1-207ENST00000486453 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
MR1-207ENST00000486453 RIMBP3CA6NJZ7 1639 aa20.16■□□□□ 0.82
MR1-207ENST00000486453 RIMBP3BA6NNM3 1639 aa20.16■□□□□ 0.82
MR1-207ENST00000486453 RIMBP3Q9UFD9 1639 aa20.16■□□□□ 0.82
MR1-207ENST00000486453 EIF4G3O43432 1585 aaKnown RBP20.13■□□□□ 0.81
MR1-207ENST00000486453 TARBP1Q13395 1621 aaKnown RBP20.11■□□□□ 0.81
MR1-207ENST00000486453 ARHGEF11O15085 1522 aa20.08■□□□□ 0.81
MR1-207ENST00000486453 POLA1P09884 1462 aaPredicted RBP20.04■□□□□ 0.8
MR1-207ENST00000486453 AQRO60306 1485 aaKnown RBP eCLIP20.02■□□□□ 0.8
MR1-207ENST00000486453 WDR97A6NE52 1622 aa20.02■□□□□ 0.79
MR1-207ENST00000486453 CHD1O14646 1710 aa20.01■□□□□ 0.79
MR1-207ENST00000486453 SOGA1O94964 1423 aa19.95■□□□□ 0.78
MR1-207ENST00000486453 RAD54L2Q9Y4B4 1467 aa19.9■□□□□ 0.78
MR1-207ENST00000486453 CYB5RLQ6IPT4 315 aa19.89■□□□□ 0.77
MR1-207ENST00000486453 FGD5Q6ZNL6 1462 aa19.87■□□□□ 0.77
MR1-207ENST00000486453 TDRD9Q8NDG6 1382 aaKnown RBP19.87■□□□□ 0.77
MR1-207ENST00000486453 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
MR1-207ENST00000486453 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
MR1-207ENST00000486453 FBLN2P98095 1184 aa19.86■□□□□ 0.77
MR1-207ENST00000486453 CUX1P39880 1505 aa19.84■□□□□ 0.77
MR1-207ENST00000486453 GRIN2BQ13224 1484 aa19.82■□□□□ 0.76
MR1-207ENST00000486453 SNAPC4Q5SXM2 1469 aa19.82■□□□□ 0.76
MR1-207ENST00000486453 CLASP1Q7Z460 1538 aa19.81■□□□□ 0.76
MR1-207ENST00000486453 SYNJ1O43426 1573 aa19.8■□□□□ 0.76
MR1-207ENST00000486453 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
MR1-207ENST00000486453 SYNJ2O15056 1496 aa19.77■□□□□ 0.76
MR1-207ENST00000486453 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
MR1-207ENST00000486453 GAPVD1Q14C86 1478 aa19.71■□□□□ 0.75
MR1-207ENST00000486453 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
MR1-207ENST00000486453 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
MR1-207ENST00000486453 ABCA5Q8WWZ7 1642 aa19.67■□□□□ 0.74
MR1-207ENST00000486453 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
MR1-207ENST00000486453 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
MR1-207ENST00000486453 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
MR1-207ENST00000486453 GRIN2AQ12879 1464 aa19.54■□□□□ 0.72
MR1-207ENST00000486453 NUP160Q12769 1436 aa19.51■□□□□ 0.71
MR1-207ENST00000486453 ADAMTS12P58397 1594 aa19.51■□□□□ 0.71
MR1-207ENST00000486453 SUPT5HO00267 1087 aaKnown RBP19.5■□□□□ 0.71
MR1-207ENST00000486453 ERICH3Q5RHP9 1530 aa19.48■□□□□ 0.71
MR1-207ENST00000486453 FHAD1B1AJZ9 1412 aa19.48■□□□□ 0.71
MR1-207ENST00000486453 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
MR1-207ENST00000486453 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
MR1-207ENST00000486453 CHIC1Q5VXU3 224 aa19.43■□□□□ 0.7
MR1-207ENST00000486453 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
MR1-207ENST00000486453 JPH4Q96JJ6 628 aa19.29■□□□□ 0.68
MR1-207ENST00000486453 PRG4Q92954 1404 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms