RNA–Protein interactions for RNA: ENST00000486434.1

GABBR1-214, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 1 (best)

Gene GABBR1, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-214ENST00000486434 NISCHQ9Y2I1 1504 aa22.65■■□□□ 1.22
GABBR1-214ENST00000486434 CCDC180Q9P1Z9 1646 aa20.25■□□□□ 0.83
GABBR1-214ENST00000486434 ABCC9O60706 1549 aa19.74■□□□□ 0.75
GABBR1-214ENST00000486434 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
GABBR1-214ENST00000486434 NACADO15069 1562 aa19.01■□□□□ 0.63
GABBR1-214ENST00000486434 DCAF8L2P0C7V8 631 aa18.87■□□□□ 0.61
GABBR1-214ENST00000486434 MYO15BQ96JP2 1530 aa18.87■□□□□ 0.61
GABBR1-214ENST00000486434 ZCCHC6Q5VYS8 1495 aaKnown RBP18.86■□□□□ 0.61
GABBR1-214ENST00000486434 DCAF1Q9Y4B6 1507 aa18.78■□□□□ 0.6
GABBR1-214ENST00000486434 UNC13AQ9UPW8 1703 aa18.63■□□□□ 0.57
GABBR1-214ENST00000486434 BICRAQ9NZM4 1560 aa18.42■□□□□ 0.54
GABBR1-214ENST00000486434 SCRIBQ14160 1630 aa18.41■□□□□ 0.54
GABBR1-214ENST00000486434 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
GABBR1-214ENST00000486434 SHROOM4Q9ULL8 1493 aa18.3■□□□□ 0.52
GABBR1-214ENST00000486434 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
GABBR1-214ENST00000486434 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.46
GABBR1-214ENST00000486434 CC2D2AQ9P2K1 1620 aa17.9■□□□□ 0.46
GABBR1-214ENST00000486434 AEBP2Q6ZN18 517 aaPredicted RBP17.81■□□□□ 0.44
GABBR1-214ENST00000486434 CECR2Q9BXF3 1484 aa17.75■□□□□ 0.43
GABBR1-214ENST00000486434 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
GABBR1-214ENST00000486434 BAZ1AQ9NRL2 1556 aaPredicted RBP17.59■□□□□ 0.41
GABBR1-214ENST00000486434 SMARCA2P51531 1590 aa17.52■□□□□ 0.39
GABBR1-214ENST00000486434 NCAPD3P42695 1498 aa17.49■□□□□ 0.39
GABBR1-214ENST00000486434 ATAD2BQ9ULI0 1458 aa17.48■□□□□ 0.39
GABBR1-214ENST00000486434 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
GABBR1-214ENST00000486434 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
GABBR1-214ENST00000486434 MROH2BQ7Z745 1585 aa17.43■□□□□ 0.38
GABBR1-214ENST00000486434 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
GABBR1-214ENST00000486434 WIZO95785 1651 aa17.28■□□□□ 0.36
GABBR1-214ENST00000486434 RSF1Q96T23 1441 aaPredicted RBP17.2■□□□□ 0.34
GABBR1-214ENST00000486434 TOP2AP11388 1531 aaKnown RBP17.11■□□□□ 0.33
GABBR1-214ENST00000486434 LAMC3Q9Y6N6 1575 aa17.09■□□□□ 0.33
GABBR1-214ENST00000486434 NESP48681 1621 aa17.06■□□□□ 0.32
GABBR1-214ENST00000486434 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
GABBR1-214ENST00000486434 CADPSQ9ULU8 1353 aa16.96■□□□□ 0.31
GABBR1-214ENST00000486434 PDS5BQ9NTI5 1447 aa16.94■□□□□ 0.3
GABBR1-214ENST00000486434 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
GABBR1-214ENST00000486434 CUX2O14529 1486 aa16.91■□□□□ 0.3
GABBR1-214ENST00000486434 THOC2Q8NI27 1593 aaKnown RBP16.88■□□□□ 0.29
GABBR1-214ENST00000486434 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
GABBR1-214ENST00000486434 CFTRP13569 1480 aa16.86■□□□□ 0.29
GABBR1-214ENST00000486434 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
GABBR1-214ENST00000486434 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
GABBR1-214ENST00000486434 FANCD2Q9BXW9 1451 aa16.79■□□□□ 0.28
GABBR1-214ENST00000486434 CHIC1Q5VXU3 224 aa16.78■□□□□ 0.28
GABBR1-214ENST00000486434 MRC2Q9UBG0 1479 aa16.78■□□□□ 0.28
GABBR1-214ENST00000486434 WDR62O43379 1518 aa16.73■□□□□ 0.27
GABBR1-214ENST00000486434 SUPT5HO00267 1087 aaKnown RBP16.69■□□□□ 0.26
GABBR1-214ENST00000486434 URB2Q14146 1524 aaKnown RBP16.61■□□□□ 0.25
GABBR1-214ENST00000486434 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
GABBR1-214ENST00000486434 DNMBPQ6XZF7 1577 aa16.53■□□□□ 0.24
GABBR1-214ENST00000486434 TOPBP1Q92547 1522 aa16.52■□□□□ 0.24
GABBR1-214ENST00000486434 IFT140Q96RY7 1462 aa16.44■□□□□ 0.22
GABBR1-214ENST00000486434 CUX1P39880 1505 aa16.37■□□□□ 0.21
GABBR1-214ENST00000486434 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
GABBR1-214ENST00000486434 POLA1P09884 1462 aaPredicted RBP16.36■□□□□ 0.21
GABBR1-214ENST00000486434 TARBP1Q13395 1621 aaKnown RBP16.36■□□□□ 0.21
GABBR1-214ENST00000486434 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.2
GABBR1-214ENST00000486434 EIF4G3O43432 1585 aaKnown RBP16.33■□□□□ 0.2
GABBR1-214ENST00000486434 ZNF608Q9ULD9 1512 aaPredicted RBP16.32■□□□□ 0.2
GABBR1-214ENST00000486434 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
GABBR1-214ENST00000486434 SOGA1O94964 1423 aa16.28■□□□□ 0.2
GABBR1-214ENST00000486434 BIVM-ERCC5R4GMW8 1640 aa16.27■□□□□ 0.2
GABBR1-214ENST00000486434 RAD54L2Q9Y4B4 1467 aa16.27■□□□□ 0.19
GABBR1-214ENST00000486434 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
GABBR1-214ENST00000486434 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
GABBR1-214ENST00000486434 SYNJ1O43426 1573 aa16.22■□□□□ 0.19
GABBR1-214ENST00000486434 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.19
GABBR1-214ENST00000486434 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
GABBR1-214ENST00000486434 ABCA10Q8WWZ4 1543 aa16.17■□□□□ 0.18
GABBR1-214ENST00000486434 PBRM1Q86U86 1689 aa16.17■□□□□ 0.18
GABBR1-214ENST00000486434 CHD1O14646 1710 aa16.16■□□□□ 0.18
GABBR1-214ENST00000486434 ABCA5Q8WWZ7 1642 aa16.15■□□□□ 0.18
GABBR1-214ENST00000486434 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
GABBR1-214ENST00000486434 GRIN2BQ13224 1484 aa16.13■□□□□ 0.17
GABBR1-214ENST00000486434 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
GABBR1-214ENST00000486434 SNAPC4Q5SXM2 1469 aa16.1■□□□□ 0.17
GABBR1-214ENST00000486434 MAGI1Q96QZ7 1491 aaPredicted RBP16.1■□□□□ 0.17
GABBR1-214ENST00000486434 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
GABBR1-214ENST00000486434 FBLN2P98095 1184 aa16.03■□□□□ 0.16
GABBR1-214ENST00000486434 ERICH3Q5RHP9 1530 aa16■□□□□ 0.15
GABBR1-214ENST00000486434 ADAMTS12P58397 1594 aa16■□□□□ 0.15
GABBR1-214ENST00000486434 CHMP7Q8WUX9 453 aaPredicted RBP15.99■□□□□ 0.15
GABBR1-214ENST00000486434 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
GABBR1-214ENST00000486434 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
GABBR1-214ENST00000486434 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
GABBR1-214ENST00000486434 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
GABBR1-214ENST00000486434 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
GABBR1-214ENST00000486434 GRIN2AQ12879 1464 aa15.92■□□□□ 0.14
GABBR1-214ENST00000486434 KIF27Q86VH2 1401 aa15.92■□□□□ 0.14
GABBR1-214ENST00000486434 ARHGEF11O15085 1522 aa15.91■□□□□ 0.14
GABBR1-214ENST00000486434 CUL7Q14999 1698 aa15.89■□□□□ 0.13
GABBR1-214ENST00000486434 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
GABBR1-214ENST00000486434 NUP160Q12769 1436 aa15.84■□□□□ 0.13
GABBR1-214ENST00000486434 IGF1RP08069 1367 aa15.81■□□□□ 0.12
GABBR1-214ENST00000486434 TRIM41Q8WV44 630 aa15.81■□□□□ 0.12
GABBR1-214ENST00000486434 SHROOM2Q13796 1616 aa15.78■□□□□ 0.12
GABBR1-214ENST00000486434 ARAP1Q96P48 1450 aa15.77■□□□□ 0.11
GABBR1-214ENST00000486434 RUSC2Q8N2Y8 1516 aa15.76■□□□□ 0.11
GABBR1-214ENST00000486434 CARMIL1Q5VZK9 1371 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms