RNA–Protein interactions for RNA: ENST00000486377.1

RNF7-206, Transcript of ring finger protein 7, humanhuman

TSL 3

Gene RNF7, Length 418 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-206ENST00000486377 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
RNF7-206ENST00000486377 AEBP2Q6ZN18 517 aaPredicted RBP23.29■■□□□ 1.32
RNF7-206ENST00000486377 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
RNF7-206ENST00000486377 CCDC180Q9P1Z9 1646 aa21.78■■□□□ 1.08
RNF7-206ENST00000486377 ABCC9O60706 1549 aa21.65■■□□□ 1.06
RNF7-206ENST00000486377 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
RNF7-206ENST00000486377 NACADO15069 1562 aa20.51■□□□□ 0.87
RNF7-206ENST00000486377 DCAF8L2P0C7V8 631 aa20.34■□□□□ 0.85
RNF7-206ENST00000486377 UNC13AQ9UPW8 1703 aa20.27■□□□□ 0.83
RNF7-206ENST00000486377 MYO15BQ96JP2 1530 aa20.25■□□□□ 0.83
RNF7-206ENST00000486377 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
RNF7-206ENST00000486377 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
RNF7-206ENST00000486377 PABPN1Q86U42 306 aaKnown RBP eCLIP20.12■□□□□ 0.81
RNF7-206ENST00000486377 BICRAQ9NZM4 1560 aa20.09■□□□□ 0.81
RNF7-206ENST00000486377 DCAF1Q9Y4B6 1507 aa20.06■□□□□ 0.8
RNF7-206ENST00000486377 SCRIBQ14160 1630 aa19.89■□□□□ 0.77
RNF7-206ENST00000486377 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
RNF7-206ENST00000486377 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
RNF7-206ENST00000486377 PHF23Q9BUL5 403 aaPredicted RBP19.59■□□□□ 0.73
RNF7-206ENST00000486377 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.72
RNF7-206ENST00000486377 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
RNF7-206ENST00000486377 CECR2Q9BXF3 1484 aa19.47■□□□□ 0.71
RNF7-206ENST00000486377 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
RNF7-206ENST00000486377 ATAD2BQ9ULI0 1458 aa18.91■□□□□ 0.62
RNF7-206ENST00000486377 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
RNF7-206ENST00000486377 SMARCA2P51531 1590 aa18.85■□□□□ 0.61
RNF7-206ENST00000486377 BAZ1AQ9NRL2 1556 aaPredicted RBP18.85■□□□□ 0.61
RNF7-206ENST00000486377 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
RNF7-206ENST00000486377 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
RNF7-206ENST00000486377 PEG3Q9GZU2 1588 aa18.76■□□□□ 0.59
RNF7-206ENST00000486377 BAZ1BQ9UIG0 1483 aaKnown RBP18.73■□□□□ 0.59
RNF7-206ENST00000486377 NESP48681 1621 aa18.66■□□□□ 0.58
RNF7-206ENST00000486377 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
RNF7-206ENST00000486377 FOXD1Q16676 465 aa18.58■□□□□ 0.56
RNF7-206ENST00000486377 CUX2O14529 1486 aa18.57■□□□□ 0.56
RNF7-206ENST00000486377 WIZO95785 1651 aa18.55■□□□□ 0.56
RNF7-206ENST00000486377 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
RNF7-206ENST00000486377 THOC2Q8NI27 1593 aaKnown RBP18.48■□□□□ 0.55
RNF7-206ENST00000486377 KIF21AQ7Z4S6 1674 aa18.45■□□□□ 0.54
RNF7-206ENST00000486377 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
RNF7-206ENST00000486377 DNAJC5Q9H3Z4 198 aa18.34■□□□□ 0.53
RNF7-206ENST00000486377 PDS5BQ9NTI5 1447 aa18.33■□□□□ 0.53
RNF7-206ENST00000486377 CADPSQ9ULU8 1353 aa18.33■□□□□ 0.53
RNF7-206ENST00000486377 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
RNF7-206ENST00000486377 MRC2Q9UBG0 1479 aa18.24■□□□□ 0.51
RNF7-206ENST00000486377 WDR62O43379 1518 aa18.21■□□□□ 0.51
RNF7-206ENST00000486377 CFTRP13569 1480 aa18.19■□□□□ 0.5
RNF7-206ENST00000486377 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
RNF7-206ENST00000486377 FANCD2Q9BXW9 1451 aa18.17■□□□□ 0.5
RNF7-206ENST00000486377 PRDM2Q13029 1718 aa18.09■□□□□ 0.49
RNF7-206ENST00000486377 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
RNF7-206ENST00000486377 URB2Q14146 1524 aaKnown RBP18.05■□□□□ 0.48
RNF7-206ENST00000486377 TOPBP1Q92547 1522 aa17.86■□□□□ 0.45
RNF7-206ENST00000486377 DNMBPQ6XZF7 1577 aa17.81■□□□□ 0.44
RNF7-206ENST00000486377 ZNF608Q9ULD9 1512 aaPredicted RBP17.81■□□□□ 0.44
RNF7-206ENST00000486377 IFT140Q96RY7 1462 aa17.8■□□□□ 0.44
RNF7-206ENST00000486377 EIF4G3O43432 1585 aaKnown RBP17.75■□□□□ 0.43
RNF7-206ENST00000486377 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
RNF7-206ENST00000486377 TARBP1Q13395 1621 aaKnown RBP17.71■□□□□ 0.43
RNF7-206ENST00000486377 POLA1P09884 1462 aaPredicted RBP17.69■□□□□ 0.42
RNF7-206ENST00000486377 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
RNF7-206ENST00000486377 TRIM41Q8WV44 630 aa17.64■□□□□ 0.41
RNF7-206ENST00000486377 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
RNF7-206ENST00000486377 CUX1P39880 1505 aa17.62■□□□□ 0.41
RNF7-206ENST00000486377 AQRO60306 1485 aaKnown RBP eCLIP17.62■□□□□ 0.41
RNF7-206ENST00000486377 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
RNF7-206ENST00000486377 CHD1O14646 1710 aa17.6■□□□□ 0.41
RNF7-206ENST00000486377 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
RNF7-206ENST00000486377 RIMBP3CA6NJZ7 1639 aa17.56■□□□□ 0.4
RNF7-206ENST00000486377 RIMBP3BA6NNM3 1639 aa17.56■□□□□ 0.4
RNF7-206ENST00000486377 RIMBP3Q9UFD9 1639 aa17.56■□□□□ 0.4
RNF7-206ENST00000486377 SOGA1O94964 1423 aa17.54■□□□□ 0.4
RNF7-206ENST00000486377 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
RNF7-206ENST00000486377 POTEDQ86YR6 584 aa17.52■□□□□ 0.4
RNF7-206ENST00000486377 TDRD9Q8NDG6 1382 aaKnown RBP17.52■□□□□ 0.39
RNF7-206ENST00000486377 ARHGEF11O15085 1522 aa17.5■□□□□ 0.39
RNF7-206ENST00000486377 SNAPC4Q5SXM2 1469 aa17.49■□□□□ 0.39
RNF7-206ENST00000486377 MSH5O43196 834 aa17.44■□□□□ 0.38
RNF7-206ENST00000486377 PBRM1Q86U86 1689 aa17.44■□□□□ 0.38
RNF7-206ENST00000486377 FBLN2P98095 1184 aa17.41■□□□□ 0.38
RNF7-206ENST00000486377 GRIN2BQ13224 1484 aa17.41■□□□□ 0.38
RNF7-206ENST00000486377 ABCA5Q8WWZ7 1642 aa17.4■□□□□ 0.38
RNF7-206ENST00000486377 MAGI1Q96QZ7 1491 aaPredicted RBP17.4■□□□□ 0.38
RNF7-206ENST00000486377 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
RNF7-206ENST00000486377 SYNJ1O43426 1573 aa17.38■□□□□ 0.37
RNF7-206ENST00000486377 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
RNF7-206ENST00000486377 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
RNF7-206ENST00000486377 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
RNF7-206ENST00000486377 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
RNF7-206ENST00000486377 TOP2BQ02880 1626 aa17.36■□□□□ 0.37
RNF7-206ENST00000486377 SYNJ2O15056 1496 aa17.34■□□□□ 0.37
RNF7-206ENST00000486377 WRNQ14191 1432 aaPredicted RBP eCLIP17.32■□□□□ 0.36
RNF7-206ENST00000486377 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
RNF7-206ENST00000486377 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
RNF7-206ENST00000486377 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
RNF7-206ENST00000486377 ADAMTS12P58397 1594 aa17.28■□□□□ 0.36
RNF7-206ENST00000486377 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
RNF7-206ENST00000486377 GRIN2AQ12879 1464 aa17.21■□□□□ 0.35
RNF7-206ENST00000486377 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
RNF7-206ENST00000486377 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms