RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-211ENST00000485967 NISCHQ9Y2I1 1504 aa32.84■■■□□ 2.85
SCAP-211ENST00000485967 CCDC180Q9P1Z9 1646 aa29.44■■■□□ 2.3
SCAP-211ENST00000485967 ABCC9O60706 1549 aa29.4■■■□□ 2.3
SCAP-211ENST00000485967 RB1CC1Q8TDY2 1594 aa27.99■■■□□ 2.07
SCAP-211ENST00000485967 NACADO15069 1562 aa27.8■■■□□ 2.04
SCAP-211ENST00000485967 DCAF8L2P0C7V8 631 aa27.58■■■□□ 2.01
SCAP-211ENST00000485967 DNAJC5BQ9UF47 199 aa27.57■■■□□ 2
SCAP-211ENST00000485967 MYO15BQ96JP2 1530 aa27.43■■□□□ 1.98
SCAP-211ENST00000485967 UNC13AQ9UPW8 1703 aa27.41■■□□□ 1.98
SCAP-211ENST00000485967 ZCCHC6Q5VYS8 1495 aaKnown RBP27.37■■□□□ 1.97
SCAP-211ENST00000485967 PABPN1Q86U42 306 aaKnown RBP eCLIP27.28■■□□□ 1.96
SCAP-211ENST00000485967 BICRAQ9NZM4 1560 aa27.22■■□□□ 1.95
SCAP-211ENST00000485967 DCAF1Q9Y4B6 1507 aa27.14■■□□□ 1.94
SCAP-211ENST00000485967 SHROOM4Q9ULL8 1493 aa26.88■■□□□ 1.89
SCAP-211ENST00000485967 SCRIBQ14160 1630 aa26.77■■□□□ 1.88
SCAP-211ENST00000485967 CC2D2AQ9P2K1 1620 aa26.59■■□□□ 1.85
SCAP-211ENST00000485967 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
SCAP-211ENST00000485967 CECR2Q9BXF3 1484 aa26.5■■□□□ 1.83
SCAP-211ENST00000485967 NCAPD3P42695 1498 aa25.64■■□□□ 1.69
SCAP-211ENST00000485967 ATAD2BQ9ULI0 1458 aa25.56■■□□□ 1.68
SCAP-211ENST00000485967 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
SCAP-211ENST00000485967 HMGXB3Q12766 1538 aa25.51■■□□□ 1.67
SCAP-211ENST00000485967 SMARCA2P51531 1590 aa25.5■■□□□ 1.67
SCAP-211ENST00000485967 BAZ1AQ9NRL2 1556 aaPredicted RBP25.44■■□□□ 1.66
SCAP-211ENST00000485967 CUX2O14529 1486 aa25.4■■□□□ 1.66
SCAP-211ENST00000485967 ERCC6Q03468 1493 aa25.38■■□□□ 1.65
SCAP-211ENST00000485967 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
SCAP-211ENST00000485967 PEG3Q9GZU2 1588 aa25.34■■□□□ 1.65
SCAP-211ENST00000485967 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
SCAP-211ENST00000485967 BAZ1BQ9UIG0 1483 aaKnown RBP25.31■■□□□ 1.64
SCAP-211ENST00000485967 NESP48681 1621 aa25.25■■□□□ 1.63
SCAP-211ENST00000485967 RSF1Q96T23 1441 aaPredicted RBP25.13■■□□□ 1.61
SCAP-211ENST00000485967 LAMC3Q9Y6N6 1575 aa25.1■■□□□ 1.61
SCAP-211ENST00000485967 THOC2Q8NI27 1593 aaKnown RBP25.09■■□□□ 1.61
SCAP-211ENST00000485967 WIZO95785 1651 aa25.05■■□□□ 1.6
SCAP-211ENST00000485967 KIF21AQ7Z4S6 1674 aa24.97■■□□□ 1.59
SCAP-211ENST00000485967 PDS5BQ9NTI5 1447 aa24.89■■□□□ 1.58
SCAP-211ENST00000485967 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
SCAP-211ENST00000485967 CADPSQ9ULU8 1353 aa24.82■■□□□ 1.56
SCAP-211ENST00000485967 TOP2AP11388 1531 aaKnown RBP24.79■■□□□ 1.56
SCAP-211ENST00000485967 MRC2Q9UBG0 1479 aa24.73■■□□□ 1.55
SCAP-211ENST00000485967 WDR62O43379 1518 aa24.71■■□□□ 1.55
SCAP-211ENST00000485967 CEP164Q9UPV0 1460 aa24.62■■□□□ 1.53
SCAP-211ENST00000485967 CFTRP13569 1480 aa24.58■■□□□ 1.52
SCAP-211ENST00000485967 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.52
SCAP-211ENST00000485967 CCDC88BA6NC98 1476 aa24.54■■□□□ 1.52
SCAP-211ENST00000485967 URB2Q14146 1524 aaKnown RBP24.4■■□□□ 1.5
SCAP-211ENST00000485967 PRDM2Q13029 1718 aa24.39■■□□□ 1.5
SCAP-211ENST00000485967 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
SCAP-211ENST00000485967 TOPBP1Q92547 1522 aa24.12■■□□□ 1.45
SCAP-211ENST00000485967 IFT140Q96RY7 1462 aa24.12■■□□□ 1.45
SCAP-211ENST00000485967 OSCARQ8IYS5 282 aa24.1■■□□□ 1.45
SCAP-211ENST00000485967 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
SCAP-211ENST00000485967 DNMBPQ6XZF7 1577 aa24.04■■□□□ 1.44
SCAP-211ENST00000485967 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
SCAP-211ENST00000485967 EIF4G3O43432 1585 aaKnown RBP24.01■■□□□ 1.43
SCAP-211ENST00000485967 TARBP1Q13395 1621 aaKnown RBP23.94■■□□□ 1.42
SCAP-211ENST00000485967 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
SCAP-211ENST00000485967 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
SCAP-211ENST00000485967 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
SCAP-211ENST00000485967 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
SCAP-211ENST00000485967 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
SCAP-211ENST00000485967 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.41e-6■■■■■ 30.9
SCAP-211ENST00000485967 CHD1O14646 1710 aa23.82■■□□□ 1.4
SCAP-211ENST00000485967 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
SCAP-211ENST00000485967 CUX1P39880 1505 aa23.73■■□□□ 1.39
SCAP-211ENST00000485967 WRNQ14191 1432 aaPredicted RBP eCLIP23.72■■□□□ 1.39
SCAP-211ENST00000485967 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
SCAP-211ENST00000485967 FGD5Q6ZNL6 1462 aa23.71■■□□□ 1.39
SCAP-211ENST00000485967 SOGA1O94964 1423 aa23.68■■□□□ 1.38
SCAP-211ENST00000485967 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
SCAP-211ENST00000485967 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
SCAP-211ENST00000485967 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
SCAP-211ENST00000485967 SYNJ1O43426 1573 aa23.58■■□□□ 1.37
SCAP-211ENST00000485967 FBLN2P98095 1184 aa23.58■■□□□ 1.37
SCAP-211ENST00000485967 TOP2BQ02880 1626 aa23.58■■□□□ 1.36
SCAP-211ENST00000485967 MAGI1Q96QZ7 1491 aaPredicted RBP23.57■■□□□ 1.36
SCAP-211ENST00000485967 CLASP1Q7Z460 1538 aa23.57■■□□□ 1.36
SCAP-211ENST00000485967 BIVM-ERCC5R4GMW8 1640 aa23.55■■□□□ 1.36
SCAP-211ENST00000485967 CYB5RLQ6IPT4 315 aa23.54■■□□□ 1.36
SCAP-211ENST00000485967 GRIN2BQ13224 1484 aa23.54■■□□□ 1.36
SCAP-211ENST00000485967 PBRM1Q86U86 1689 aa23.5■■□□□ 1.35
SCAP-211ENST00000485967 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
SCAP-211ENST00000485967 ABCA5Q8WWZ7 1642 aa23.47■■□□□ 1.35
SCAP-211ENST00000485967 ABCA10Q8WWZ4 1543 aa23.44■■□□□ 1.34
SCAP-211ENST00000485967 GAPVD1Q14C86 1478 aa23.44■■□□□ 1.34
SCAP-211ENST00000485967 CHMP7Q8WUX9 453 aaPredicted RBP23.42■■□□□ 1.34
SCAP-211ENST00000485967 ADAMTS12P58397 1594 aa23.29■■□□□ 1.32
SCAP-211ENST00000485967 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
SCAP-211ENST00000485967 GRIN2AQ12879 1464 aa23.26■■□□□ 1.31
SCAP-211ENST00000485967 TRHP20396 242 aaPredicted RBP23.26■■□□□ 1.31
SCAP-211ENST00000485967 KIF27Q86VH2 1401 aa23.23■■□□□ 1.31
SCAP-211ENST00000485967 NUP160Q12769 1436 aa23.2■■□□□ 1.3
SCAP-211ENST00000485967 CEP170Q5SW79 1584 aa23.19■■□□□ 1.3
SCAP-211ENST00000485967 ERCC6L2Q5T890 1561 aa23.16■■□□□ 1.3
SCAP-211ENST00000485967 ERICH3Q5RHP9 1530 aa23.15■■□□□ 1.3
SCAP-211ENST00000485967 FHAD1B1AJZ9 1412 aa23.15■■□□□ 1.3
SCAP-211ENST00000485967 SHROOM2Q13796 1616 aa23.13■■□□□ 1.29
SCAP-211ENST00000485967 IGF1RP08069 1367 aa23.1■■□□□ 1.29
SCAP-211ENST00000485967 RUSC2Q8N2Y8 1516 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms