RNA–Protein interactions for RNA: ENST00000485937.1

PSMD2-214, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

TSL 2

Gene PSMD2, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-214ENST00000485937 NISCHQ9Y2I1 1504 aa29.28■■■□□ 2.28
PSMD2-214ENST00000485937 ABCC9O60706 1549 aa26.55■■□□□ 1.84
PSMD2-214ENST00000485937 CCDC180Q9P1Z9 1646 aa26.27■■□□□ 1.8
PSMD2-214ENST00000485937 RB1CC1Q8TDY2 1594 aa25.15■■□□□ 1.62
PSMD2-214ENST00000485937 DCAF8L2P0C7V8 631 aa25.04■■□□□ 1.6
PSMD2-214ENST00000485937 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
PSMD2-214ENST00000485937 NACADO15069 1562 aa24.93■■□□□ 1.58
PSMD2-214ENST00000485937 PABPN1Q86U42 306 aaKnown RBP eCLIP24.77■■□□□ 1.56
PSMD2-214ENST00000485937 MYO15BQ96JP2 1530 aa24.48■■□□□ 1.51
PSMD2-214ENST00000485937 UNC13AQ9UPW8 1703 aa24.47■■□□□ 1.51
PSMD2-214ENST00000485937 BICRAQ9NZM4 1560 aa24.36■■□□□ 1.49
PSMD2-214ENST00000485937 ZCCHC6Q5VYS8 1495 aaKnown RBP24.2■■□□□ 1.47
PSMD2-214ENST00000485937 DCAF1Q9Y4B6 1507 aa24.12■■□□□ 1.45
PSMD2-214ENST00000485937 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
PSMD2-214ENST00000485937 SHROOM4Q9ULL8 1493 aa24.01■■□□□ 1.43
PSMD2-214ENST00000485937 CECR2Q9BXF3 1484 aa23.92■■□□□ 1.42
PSMD2-214ENST00000485937 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
PSMD2-214ENST00000485937 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
PSMD2-214ENST00000485937 DNAJC5Q9H3Z4 198 aa23.12■■□□□ 1.29
PSMD2-214ENST00000485937 NCAPD3P42695 1498 aa23.03■■□□□ 1.28
PSMD2-214ENST00000485937 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
PSMD2-214ENST00000485937 ATAD2BQ9ULI0 1458 aa22.94■■□□□ 1.26
PSMD2-214ENST00000485937 CUX2O14529 1486 aa22.89■■□□□ 1.25
PSMD2-214ENST00000485937 SMARCA2P51531 1590 aa22.88■■□□□ 1.25
PSMD2-214ENST00000485937 SMARCA4P51532 1647 aa22.85■■□□□ 1.25
PSMD2-214ENST00000485937 HMGXB3Q12766 1538 aa22.8■■□□□ 1.24
PSMD2-214ENST00000485937 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
PSMD2-214ENST00000485937 BAZ1AQ9NRL2 1556 aaPredicted RBP22.75■■□□□ 1.23
PSMD2-214ENST00000485937 NESP48681 1621 aa22.73■■□□□ 1.23
PSMD2-214ENST00000485937 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
PSMD2-214ENST00000485937 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
PSMD2-214ENST00000485937 LAMC3Q9Y6N6 1575 aa22.52■■□□□ 1.2
PSMD2-214ENST00000485937 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
PSMD2-214ENST00000485937 THOC2Q8NI27 1593 aaKnown RBP22.45■■□□□ 1.18
PSMD2-214ENST00000485937 KIF21AQ7Z4S6 1674 aa22.38■■□□□ 1.17
PSMD2-214ENST00000485937 CADPSQ9ULU8 1353 aa22.37■■□□□ 1.17
PSMD2-214ENST00000485937 WIZO95785 1651 aa22.28■■□□□ 1.16
PSMD2-214ENST00000485937 MRC2Q9UBG0 1479 aa22.24■■□□□ 1.15
PSMD2-214ENST00000485937 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
PSMD2-214ENST00000485937 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
PSMD2-214ENST00000485937 WDR62O43379 1518 aa22.14■■□□□ 1.13
PSMD2-214ENST00000485937 FANCD2Q9BXW9 1451 aa22.1■■□□□ 1.13
PSMD2-214ENST00000485937 RSF1Q96T23 1441 aaPredicted RBP22.06■■□□□ 1.12
PSMD2-214ENST00000485937 CFTRP13569 1480 aa22.03■■□□□ 1.12
PSMD2-214ENST00000485937 TOP2AP11388 1531 aaKnown RBP21.98■■□□□ 1.11
PSMD2-214ENST00000485937 OSCARQ8IYS5 282 aa21.95■■□□□ 1.1
PSMD2-214ENST00000485937 URB2Q14146 1524 aaKnown RBP21.9■■□□□ 1.1
PSMD2-214ENST00000485937 CCDC88BA6NC98 1476 aa21.78■■□□□ 1.08
PSMD2-214ENST00000485937 PRDM2Q13029 1718 aa21.71■■□□□ 1.07
PSMD2-214ENST00000485937 IFT140Q96RY7 1462 aa21.7■■□□□ 1.06
PSMD2-214ENST00000485937 ZNF608Q9ULD9 1512 aaPredicted RBP21.67■■□□□ 1.06
PSMD2-214ENST00000485937 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
PSMD2-214ENST00000485937 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
PSMD2-214ENST00000485937 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
PSMD2-214ENST00000485937 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
PSMD2-214ENST00000485937 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
PSMD2-214ENST00000485937 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
PSMD2-214ENST00000485937 FBLN2P98095 1184 aa21.52■■□□□ 1.04
PSMD2-214ENST00000485937 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
PSMD2-214ENST00000485937 AQRO60306 1485 aaKnown RBP eCLIP21.5■■□□□ 1.033e-10■■□□□ 12.4
PSMD2-214ENST00000485937 ARHGEF11O15085 1522 aa21.48■■□□□ 1.03
PSMD2-214ENST00000485937 CYB5RLQ6IPT4 315 aa21.47■■□□□ 1.03
PSMD2-214ENST00000485937 TARBP1Q13395 1621 aaKnown RBP21.41■■□□□ 1.02
PSMD2-214ENST00000485937 POLA1P09884 1462 aaPredicted RBP21.41■■□□□ 1.02
PSMD2-214ENST00000485937 SOGA1O94964 1423 aa21.38■■□□□ 1.01
PSMD2-214ENST00000485937 RAD54L2Q9Y4B4 1467 aa21.38■■□□□ 1.01
PSMD2-214ENST00000485937 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
PSMD2-214ENST00000485937 CHD1O14646 1710 aa21.35■■□□□ 1.01
PSMD2-214ENST00000485937 TRHP20396 242 aaPredicted RBP21.34■■□□□ 1.01
PSMD2-214ENST00000485937 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
PSMD2-214ENST00000485937 FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
PSMD2-214ENST00000485937 SNAPC4Q5SXM2 1469 aa21.25■□□□□ 0.99
PSMD2-214ENST00000485937 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
PSMD2-214ENST00000485937 CUX1P39880 1505 aa21.2■□□□□ 0.98
PSMD2-214ENST00000485937 GRIN2BQ13224 1484 aa21.18■□□□□ 0.98
PSMD2-214ENST00000485937 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
PSMD2-214ENST00000485937 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
PSMD2-214ENST00000485937 MAGI1Q96QZ7 1491 aaPredicted RBP21.16■□□□□ 0.98
PSMD2-214ENST00000485937 SYNJ1O43426 1573 aa21.14■□□□□ 0.98
PSMD2-214ENST00000485937 SYNJ2O15056 1496 aa21.11■□□□□ 0.97
PSMD2-214ENST00000485937 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
PSMD2-214ENST00000485937 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
PSMD2-214ENST00000485937 PBRM1Q86U86 1689 aa21.01■□□□□ 0.95
PSMD2-214ENST00000485937 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
PSMD2-214ENST00000485937 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.95
PSMD2-214ENST00000485937 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
PSMD2-214ENST00000485937 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
PSMD2-214ENST00000485937 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
PSMD2-214ENST00000485937 FHAD1B1AJZ9 1412 aa20.82■□□□□ 0.92
PSMD2-214ENST00000485937 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
PSMD2-214ENST00000485937 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
PSMD2-214ENST00000485937 ERCC6L2Q5T890 1561 aa20.79■□□□□ 0.92
PSMD2-214ENST00000485937 NUP160Q12769 1436 aa20.78■□□□□ 0.92
PSMD2-214ENST00000485937 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
PSMD2-214ENST00000485937 CEP170Q5SW79 1584 aa20.78■□□□□ 0.92
PSMD2-214ENST00000485937 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
PSMD2-214ENST00000485937 JPH4Q96JJ6 628 aa20.71■□□□□ 0.91
PSMD2-214ENST00000485937 PRG4Q92954 1404 aaPredicted RBP20.69■□□□□ 0.9
PSMD2-214ENST00000485937 SHROOM2Q13796 1616 aa20.67■□□□□ 0.9
PSMD2-214ENST00000485937 NPM1P06748 294 aaKnown RBP eCLIP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms