RNA–Protein interactions for RNA: ENST00000485359.1

DENND4B-210, Transcript of DENN domain containing 4B, humanhuman

TSL 2

Gene DENND4B, Length 891 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-210ENST00000485359 NISCHQ9Y2I1 1504 aa36.55■■■■□ 3.44
DENND4B-210ENST00000485359 ABCC9O60706 1549 aa33.18■■■□□ 2.9
DENND4B-210ENST00000485359 CCDC180Q9P1Z9 1646 aa32.73■■■□□ 2.83
DENND4B-210ENST00000485359 RB1CC1Q8TDY2 1594 aa31.35■■■□□ 2.61
DENND4B-210ENST00000485359 DNAJC5BQ9UF47 199 aa31.29■■■□□ 2.6
DENND4B-210ENST00000485359 DCAF8L2P0C7V8 631 aa31.2■■■□□ 2.59
DENND4B-210ENST00000485359 NACADO15069 1562 aa31.08■■■□□ 2.57
DENND4B-210ENST00000485359 PABPN1Q86U42 306 aaKnown RBP eCLIP30.95■■■□□ 2.55
DENND4B-210ENST00000485359 MYO15BQ96JP2 1530 aa30.52■■■□□ 2.48
DENND4B-210ENST00000485359 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
DENND4B-210ENST00000485359 BICRAQ9NZM4 1560 aa30.43■■■□□ 2.46
DENND4B-210ENST00000485359 ZCCHC6Q5VYS8 1495 aaKnown RBP30.25■■■□□ 2.43
DENND4B-210ENST00000485359 DCAF1Q9Y4B6 1507 aa30.08■■■□□ 2.41
DENND4B-210ENST00000485359 SCRIBQ14160 1630 aa30.01■■■□□ 2.39
DENND4B-210ENST00000485359 SHROOM4Q9ULL8 1493 aa29.94■■■□□ 2.38
DENND4B-210ENST00000485359 CECR2Q9BXF3 1484 aa29.87■■■□□ 2.37
DENND4B-210ENST00000485359 CC2D2AQ9P2K1 1620 aa29.84■■■□□ 2.37
DENND4B-210ENST00000485359 EIF4G1Q04637 1599 aaKnown RBP29.73■■■□□ 2.35
DENND4B-210ENST00000485359 DNAJC5Q9H3Z4 198 aa28.82■■■□□ 2.2
DENND4B-210ENST00000485359 NCAPD3P42695 1498 aa28.73■■■□□ 2.19
DENND4B-210ENST00000485359 ERCC6Q03468 1493 aa28.66■■■□□ 2.18
DENND4B-210ENST00000485359 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
DENND4B-210ENST00000485359 CUX2O14529 1486 aa28.55■■■□□ 2.16
DENND4B-210ENST00000485359 SMARCA4P51532 1647 aa28.52■■■□□ 2.16
DENND4B-210ENST00000485359 SMARCA2P51531 1590 aa28.51■■■□□ 2.15
DENND4B-210ENST00000485359 HMGXB3Q12766 1538 aa28.46■■■□□ 2.15
DENND4B-210ENST00000485359 NESP48681 1621 aa28.43■■■□□ 2.14
DENND4B-210ENST00000485359 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
DENND4B-210ENST00000485359 BAZ1AQ9NRL2 1556 aaPredicted RBP28.37■■■□□ 2.13
DENND4B-210ENST00000485359 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.11
DENND4B-210ENST00000485359 PEG3Q9GZU2 1588 aa28.18■■■□□ 2.1
DENND4B-210ENST00000485359 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
DENND4B-210ENST00000485359 THOC2Q8NI27 1593 aaKnown RBP28.05■■■□□ 2.08
DENND4B-210ENST00000485359 PDS5BQ9NTI5 1447 aa28.01■■■□□ 2.07
DENND4B-210ENST00000485359 CADPSQ9ULU8 1353 aa27.91■■■□□ 2.06
DENND4B-210ENST00000485359 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
DENND4B-210ENST00000485359 WIZO95785 1651 aa27.82■■■□□ 2.04
DENND4B-210ENST00000485359 MRC2Q9UBG0 1479 aa27.77■■■□□ 2.04
DENND4B-210ENST00000485359 WDR62O43379 1518 aa27.65■■■□□ 2.02
DENND4B-210ENST00000485359 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
DENND4B-210ENST00000485359 CEP164Q9UPV0 1460 aa27.63■■■□□ 2.01
DENND4B-210ENST00000485359 FANCD2Q9BXW9 1451 aa27.6■■■□□ 2.01
DENND4B-210ENST00000485359 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2
DENND4B-210ENST00000485359 CFTRP13569 1480 aa27.51■■■□□ 2
DENND4B-210ENST00000485359 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
DENND4B-210ENST00000485359 URB2Q14146 1524 aaKnown RBP27.36■■□□□ 1.97
DENND4B-210ENST00000485359 OSCARQ8IYS5 282 aa27.33■■□□□ 1.97
DENND4B-210ENST00000485359 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.95
DENND4B-210ENST00000485359 ZNF608Q9ULD9 1512 aaPredicted RBP27.1■■□□□ 1.93
DENND4B-210ENST00000485359 IFT140Q96RY7 1462 aa27.07■■□□□ 1.92
DENND4B-210ENST00000485359 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
DENND4B-210ENST00000485359 PRDM2Q13029 1718 aa27■■□□□ 1.91
DENND4B-210ENST00000485359 ABCC8Q09428 1581 aa26.9■■□□□ 1.9
DENND4B-210ENST00000485359 RIMBP3CA6NJZ7 1639 aa26.88■■□□□ 1.89
DENND4B-210ENST00000485359 RIMBP3BA6NNM3 1639 aa26.88■■□□□ 1.89
DENND4B-210ENST00000485359 RIMBP3Q9UFD9 1639 aa26.88■■□□□ 1.89
DENND4B-210ENST00000485359 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
DENND4B-210ENST00000485359 EIF4G3O43432 1585 aaKnown RBP26.85■■□□□ 1.89
DENND4B-210ENST00000485359 AQRO60306 1485 aaKnown RBP eCLIP26.85■■□□□ 1.894e-8■■■■■ 32.1
DENND4B-210ENST00000485359 ARHGEF11O15085 1522 aa26.82■■□□□ 1.88
DENND4B-210ENST00000485359 FBLN2P98095 1184 aa26.82■■□□□ 1.88
DENND4B-210ENST00000485359 CYB5RLQ6IPT4 315 aa26.76■■□□□ 1.87
DENND4B-210ENST00000485359 POLA1P09884 1462 aaPredicted RBP26.75■■□□□ 1.87
DENND4B-210ENST00000485359 TARBP1Q13395 1621 aaKnown RBP26.72■■□□□ 1.87
DENND4B-210ENST00000485359 RAD54L2Q9Y4B4 1467 aa26.72■■□□□ 1.87
DENND4B-210ENST00000485359 TDRD9Q8NDG6 1382 aaKnown RBP26.7■■□□□ 1.86
DENND4B-210ENST00000485359 SOGA1O94964 1423 aa26.67■■□□□ 1.86
DENND4B-210ENST00000485359 CHD1O14646 1710 aa26.62■■□□□ 1.85
DENND4B-210ENST00000485359 FGD5Q6ZNL6 1462 aa26.58■■□□□ 1.85
DENND4B-210ENST00000485359 ARAP1Q96P48 1450 aa26.57■■□□□ 1.84
DENND4B-210ENST00000485359 TRHP20396 242 aaPredicted RBP26.57■■□□□ 1.84
DENND4B-210ENST00000485359 SNAPC4Q5SXM2 1469 aa26.55■■□□□ 1.84
DENND4B-210ENST00000485359 CHMP7Q8WUX9 453 aaPredicted RBP26.53■■□□□ 1.84
DENND4B-210ENST00000485359 CUX1P39880 1505 aa26.5■■□□□ 1.83
DENND4B-210ENST00000485359 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
DENND4B-210ENST00000485359 SUPT5HO00267 1087 aaKnown RBP26.4■■□□□ 1.82
DENND4B-210ENST00000485359 MAGI1Q96QZ7 1491 aaPredicted RBP26.4■■□□□ 1.82
DENND4B-210ENST00000485359 WDR97A6NE52 1622 aa26.38■■□□□ 1.81
DENND4B-210ENST00000485359 CLASP1Q7Z460 1538 aa26.37■■□□□ 1.81
DENND4B-210ENST00000485359 SYNJ1O43426 1573 aa26.35■■□□□ 1.81
DENND4B-210ENST00000485359 SYNJ2O15056 1496 aa26.35■■□□□ 1.81
DENND4B-210ENST00000485359 GAPVD1Q14C86 1478 aa26.31■■□□□ 1.8
DENND4B-210ENST00000485359 ABCA10Q8WWZ4 1543 aa26.21■■□□□ 1.79
DENND4B-210ENST00000485359 PBRM1Q86U86 1689 aa26.19■■□□□ 1.78
DENND4B-210ENST00000485359 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.78
DENND4B-210ENST00000485359 ABCA5Q8WWZ7 1642 aa26.14■■□□□ 1.78
DENND4B-210ENST00000485359 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
DENND4B-210ENST00000485359 ERCC6L2Q5T890 1561 aa26.02■■□□□ 1.76
DENND4B-210ENST00000485359 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
DENND4B-210ENST00000485359 FHAD1B1AJZ9 1412 aa25.97■■□□□ 1.75
DENND4B-210ENST00000485359 NUP160Q12769 1436 aa25.97■■□□□ 1.75
DENND4B-210ENST00000485359 CEP170Q5SW79 1584 aa25.97■■□□□ 1.75
DENND4B-210ENST00000485359 TOP2BQ02880 1626 aa25.96■■□□□ 1.75
DENND4B-210ENST00000485359 BIVM-ERCC5R4GMW8 1640 aa25.92■■□□□ 1.74
DENND4B-210ENST00000485359 AEBP2Q6ZN18 517 aaPredicted RBP25.91■■□□□ 1.74
DENND4B-210ENST00000485359 ERICH3Q5RHP9 1530 aa25.86■■□□□ 1.73
DENND4B-210ENST00000485359 PRG4Q92954 1404 aaPredicted RBP25.82■■□□□ 1.72
DENND4B-210ENST00000485359 SHROOM2Q13796 1616 aa25.79■■□□□ 1.72
DENND4B-210ENST00000485359 JPH4Q96JJ6 628 aa25.79■■□□□ 1.72
DENND4B-210ENST00000485359 NPM1P06748 294 aaKnown RBP eCLIP25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms