RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 NISCHQ9Y2I1 1504 aa16.26■□□□□ 0.19
CAPN13-206ENST00000485248 ABCC9O60706 1549 aa15.7■□□□□ 0.1
CAPN13-206ENST00000485248 CHIC1Q5VXU3 224 aa15.2■□□□□ 0.02
CAPN13-206ENST00000485248 DNAJC5BQ9UF47 199 aa15.2■□□□□ 0.02
CAPN13-206ENST00000485248 CCDC180Q9P1Z9 1646 aa15.02□□□□□ -0.01
CAPN13-206ENST00000485248 AEBP2Q6ZN18 517 aaPredicted RBP14.83□□□□□ -0.04
CAPN13-206ENST00000485248 RB1CC1Q8TDY2 1594 aa14.68□□□□□ -0.06
CAPN13-206ENST00000485248 DNAJC5Q9H3Z4 198 aa14.62□□□□□ -0.07
CAPN13-206ENST00000485248 PABPN1Q86U42 306 aaKnown RBP eCLIP14.46□□□□□ -0.09
CAPN13-206ENST00000485248 NACADO15069 1562 aa14.35□□□□□ -0.11
CAPN13-206ENST00000485248 UNC13AQ9UPW8 1703 aa14.26□□□□□ -0.13
CAPN13-206ENST00000485248 CECR2Q9BXF3 1484 aa14.24□□□□□ -0.13
CAPN13-206ENST00000485248 DCAF8L2P0C7V8 631 aa14.19□□□□□ -0.14
CAPN13-206ENST00000485248 CC2D2AQ9P2K1 1620 aa14.15□□□□□ -0.14
CAPN13-206ENST00000485248 BICRAQ9NZM4 1560 aa14.11□□□□□ -0.15
CAPN13-206ENST00000485248 SHROOM4Q9ULL8 1493 aa13.99□□□□□ -0.17
CAPN13-206ENST00000485248 EIF4G1Q04637 1599 aaKnown RBP13.92□□□□□ -0.18
CAPN13-206ENST00000485248 CUX2O14529 1486 aa13.88□□□□□ -0.19
CAPN13-206ENST00000485248 MYO15BQ96JP2 1530 aa13.84□□□□□ -0.19
CAPN13-206ENST00000485248 TRIM41Q8WV44 630 aa13.81□□□□□ -0.2
CAPN13-206ENST00000485248 ERCC6Q03468 1493 aa13.74□□□□□ -0.21
CAPN13-206ENST00000485248 SCRIBQ14160 1630 aa13.63□□□□□ -0.23
CAPN13-206ENST00000485248 PHF23Q9BUL5 403 aaPredicted RBP13.48□□□□□ -0.25
CAPN13-206ENST00000485248 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
CAPN13-206ENST00000485248 ZCCHC6Q5VYS8 1495 aaKnown RBP13.32□□□□□ -0.28
CAPN13-206ENST00000485248 THOC2Q8NI27 1593 aaKnown RBP13.28□□□□□ -0.28
CAPN13-206ENST00000485248 NESP48681 1621 aa13.21□□□□□ -0.29
CAPN13-206ENST00000485248 SMARCA2P51531 1590 aa13.21□□□□□ -0.29
CAPN13-206ENST00000485248 NCAPD3P42695 1498 aa13.18□□□□□ -0.3
CAPN13-206ENST00000485248 BAZ1AQ9NRL2 1556 aaPredicted RBP13.16□□□□□ -0.3
CAPN13-206ENST00000485248 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
CAPN13-206ENST00000485248 KIF21AQ7Z4S6 1674 aa13.1□□□□□ -0.31
CAPN13-206ENST00000485248 LAMC3Q9Y6N6 1575 aa13.1□□□□□ -0.31
CAPN13-206ENST00000485248 HMGXB3Q12766 1538 aa13.08□□□□□ -0.31
CAPN13-206ENST00000485248 PDS5BQ9NTI5 1447 aa13.06□□□□□ -0.32
CAPN13-206ENST00000485248 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
CAPN13-206ENST00000485248 ATAD2BQ9ULI0 1458 aa13.04□□□□□ -0.32
CAPN13-206ENST00000485248 RIMBP3CA6NJZ7 1639 aa13.01□□□□□ -0.33
CAPN13-206ENST00000485248 RIMBP3BA6NNM3 1639 aa13.01□□□□□ -0.33
CAPN13-206ENST00000485248 RIMBP3Q9UFD9 1639 aa13.01□□□□□ -0.33
CAPN13-206ENST00000485248 MRC2Q9UBG0 1479 aa12.97□□□□□ -0.33
CAPN13-206ENST00000485248 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
CAPN13-206ENST00000485248 WDR62O43379 1518 aa12.94□□□□□ -0.34
CAPN13-206ENST00000485248 SMARCA4P51532 1647 aa12.89□□□□□ -0.35
CAPN13-206ENST00000485248 ARHGEF11O15085 1522 aa12.88□□□□□ -0.35
CAPN13-206ENST00000485248 CYB5RLQ6IPT4 315 aa12.85□□□□□ -0.35
CAPN13-206ENST00000485248 CEP164Q9UPV0 1460 aa12.8□□□□□ -0.36
CAPN13-206ENST00000485248 CADPSQ9ULU8 1353 aa12.78□□□□□ -0.36
CAPN13-206ENST00000485248 PEG3Q9GZU2 1588 aa12.73□□□□□ -0.37
CAPN13-206ENST00000485248 ILDR1Q86SU0 546 aaPredicted RBP12.69□□□□□ -0.38
CAPN13-206ENST00000485248 FANCD2Q9BXW9 1451 aa12.67□□□□□ -0.38
CAPN13-206ENST00000485248 ARAP1Q96P48 1450 aa12.66□□□□□ -0.38
CAPN13-206ENST00000485248 PLPPR3Q6T4P5 718 aa12.66□□□□□ -0.38
CAPN13-206ENST00000485248 RSF1Q96T23 1441 aaPredicted RBP12.59□□□□□ -0.39
CAPN13-206ENST00000485248 CHD1O14646 1710 aa12.56□□□□□ -0.4
CAPN13-206ENST00000485248 IFT140Q96RY7 1462 aa12.55□□□□□ -0.4
CAPN13-206ENST00000485248 URB2Q14146 1524 aaKnown RBP12.55□□□□□ -0.4
CAPN13-206ENST00000485248 FBLN2P98095 1184 aa12.53□□□□□ -0.4
CAPN13-206ENST00000485248 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
CAPN13-206ENST00000485248 EIF4G3O43432 1585 aaKnown RBP12.5□□□□□ -0.41
CAPN13-206ENST00000485248 MROH2BQ7Z745 1585 aa12.49□□□□□ -0.41
CAPN13-206ENST00000485248 CFTRP13569 1480 aa12.46□□□□□ -0.42
CAPN13-206ENST00000485248 SENP3Q9H4L4 574 aaPredicted RBP12.41□□□□□ -0.42
CAPN13-206ENST00000485248 PRDM2Q13029 1718 aa12.4□□□□□ -0.43
CAPN13-206ENST00000485248 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
CAPN13-206ENST00000485248 WIZO95785 1651 aa12.36□□□□□ -0.43
CAPN13-206ENST00000485248 AQRO60306 1485 aaKnown RBP eCLIP12.33□□□□□ -0.44
CAPN13-206ENST00000485248 CLASP1Q7Z460 1538 aa12.32□□□□□ -0.44
CAPN13-206ENST00000485248 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
CAPN13-206ENST00000485248 ABCC8Q09428 1581 aa12.32□□□□□ -0.44
CAPN13-206ENST00000485248 GAPVD1Q14C86 1478 aa12.31□□□□□ -0.44
CAPN13-206ENST00000485248 CHMP7Q8WUX9 453 aaPredicted RBP12.29□□□□□ -0.44
CAPN13-206ENST00000485248 ERCC6L2Q5T890 1561 aa12.25□□□□□ -0.45
CAPN13-206ENST00000485248 DNMBPQ6XZF7 1577 aa12.25□□□□□ -0.45
CAPN13-206ENST00000485248 TARBP1Q13395 1621 aaKnown RBP12.24□□□□□ -0.45
CAPN13-206ENST00000485248 SNAPC4Q5SXM2 1469 aa12.23□□□□□ -0.45
CAPN13-206ENST00000485248 KDM4FA0A1W2PPD8 638 aa12.22□□□□□ -0.45
CAPN13-206ENST00000485248 KIF13AQ9H1H9 1805 aa12.21□□□□□ -0.46
CAPN13-206ENST00000485248 MAGI1Q96QZ7 1491 aaPredicted RBP12.19□□□□□ -0.46
CAPN13-206ENST00000485248 KDM6BO15054 1643 aa12.19□□□□□ -0.46
CAPN13-206ENST00000485248 TOP2AP11388 1531 aaKnown RBP12.18□□□□□ -0.46
CAPN13-206ENST00000485248 WDR97A6NE52 1622 aa12.18□□□□□ -0.46
CAPN13-206ENST00000485248 FBXO41Q8TF61 875 aa12.17□□□□□ -0.46
CAPN13-206ENST00000485248 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
CAPN13-206ENST00000485248 LMTK3Q96Q04 1460 aa12.14□□□□□ -0.47
CAPN13-206ENST00000485248 HECW2Q9P2P5 1572 aa12.14□□□□□ -0.47
CAPN13-206ENST00000485248 TDRD9Q8NDG6 1382 aaKnown RBP12.14□□□□□ -0.47
CAPN13-206ENST00000485248 POLA1P09884 1462 aaPredicted RBP12.14□□□□□ -0.47
CAPN13-206ENST00000485248 FAM69CQ0P6D2 419 aa12.11□□□□□ -0.47
CAPN13-206ENST00000485248 GRIN2BQ13224 1484 aa12.1□□□□□ -0.47
CAPN13-206ENST00000485248 SOGA1O94964 1423 aa12.1□□□□□ -0.47
CAPN13-206ENST00000485248 RAD54L2Q9Y4B4 1467 aa12.09□□□□□ -0.47
CAPN13-206ENST00000485248 NPM1P06748 294 aaKnown RBP eCLIP12.08□□□□□ -0.48
CAPN13-206ENST00000485248 ADGRL1O94910 1474 aa12.06□□□□□ -0.48
CAPN13-206ENST00000485248 PBRM1Q86U86 1689 aa12.04□□□□□ -0.48
CAPN13-206ENST00000485248 ABCC10Q5T3U5 1492 aa12.04□□□□□ -0.48
CAPN13-206ENST00000485248 EHMT2Q96KQ7 1210 aa12.04□□□□□ -0.48
CAPN13-206ENST00000485248 TSPOAP1O95153 1857 aa12.02□□□□□ -0.48
CAPN13-206ENST00000485248 CEP170Q5SW79 1584 aa12.01□□□□□ -0.49
CAPN13-206ENST00000485248 DIP2BQ9P265 1576 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms