RNA–Protein interactions for RNA: ENST00000485161.5

RABL3-207, Transcript of RAB, member of RAS oncogene family like 3, humanhuman

TSL 5

Gene RABL3, Length 1,715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABL3-207ENST00000485161 NISCHQ9Y2I1 1504 aa17.95■□□□□ 0.46
RABL3-207ENST00000485161 AEBP2Q6ZN18 517 aaPredicted RBP17.05■□□□□ 0.32
RABL3-207ENST00000485161 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
RABL3-207ENST00000485161 ABCC9O60706 1549 aa16.31■□□□□ 0.2
RABL3-207ENST00000485161 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
RABL3-207ENST00000485161 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
RABL3-207ENST00000485161 RB1CC1Q8TDY2 1594 aa15.47■□□□□ 0.07
RABL3-207ENST00000485161 DCAF8L2P0C7V8 631 aa15.45■□□□□ 0.06
RABL3-207ENST00000485161 NACADO15069 1562 aa15.32■□□□□ 0.04
RABL3-207ENST00000485161 PABPN1Q86U42 306 aaKnown RBP eCLIP15.24■□□□□ 0.03
RABL3-207ENST00000485161 UNC13AQ9UPW8 1703 aa15.21■□□□□ 0.03
RABL3-207ENST00000485161 BICRAQ9NZM4 1560 aa15.12■□□□□ 0.01
RABL3-207ENST00000485161 MYO15BQ96JP2 1530 aa15.09■□□□□ 0.01
RABL3-207ENST00000485161 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
RABL3-207ENST00000485161 ZCCHC6Q5VYS8 1495 aaKnown RBP14.84□□□□□ -0.03
RABL3-207ENST00000485161 CC2D2AQ9P2K1 1620 aa14.8□□□□□ -0.04
RABL3-207ENST00000485161 SCRIBQ14160 1630 aa14.77□□□□□ -0.04
RABL3-207ENST00000485161 DCAF1Q9Y4B6 1507 aa14.76□□□□□ -0.05
RABL3-207ENST00000485161 CECR2Q9BXF3 1484 aa14.75□□□□□ -0.05
RABL3-207ENST00000485161 EIF4G1Q04637 1599 aaKnown RBP14.71□□□□□ -0.06
RABL3-207ENST00000485161 DNAJC5Q9H3Z4 198 aa14.57□□□□□ -0.08
RABL3-207ENST00000485161 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
RABL3-207ENST00000485161 SENP3Q9H4L4 574 aaPredicted RBP14.4□□□□□ -0.1
RABL3-207ENST00000485161 CUX2O14529 1486 aa14.28□□□□□ -0.12
RABL3-207ENST00000485161 POTEDQ86YR6 584 aa14.21□□□□□ -0.13
RABL3-207ENST00000485161 NCAPD3P42695 1498 aa14.15□□□□□ -0.14
RABL3-207ENST00000485161 ERCC6Q03468 1493 aa14.11□□□□□ -0.15
RABL3-207ENST00000485161 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
RABL3-207ENST00000485161 HMGXB3Q12766 1538 aa14.04□□□□□ -0.16
RABL3-207ENST00000485161 SMARCA4P51532 1647 aa14.01□□□□□ -0.17
RABL3-207ENST00000485161 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
RABL3-207ENST00000485161 THOC2Q8NI27 1593 aaKnown RBP13.99□□□□□ -0.17
RABL3-207ENST00000485161 NESP48681 1621 aa13.97□□□□□ -0.17
RABL3-207ENST00000485161 BAZ1BQ9UIG0 1483 aaKnown RBP13.96□□□□□ -0.17
RABL3-207ENST00000485161 BAZ1AQ9NRL2 1556 aaPredicted RBP13.94□□□□□ -0.18
RABL3-207ENST00000485161 PEG3Q9GZU2 1588 aa13.91□□□□□ -0.18
RABL3-207ENST00000485161 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
RABL3-207ENST00000485161 MROH2BQ7Z745 1585 aa13.86□□□□□ -0.19
RABL3-207ENST00000485161 KIF21AQ7Z4S6 1674 aa13.83□□□□□ -0.2
RABL3-207ENST00000485161 PDS5BQ9NTI5 1447 aa13.76□□□□□ -0.21
RABL3-207ENST00000485161 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.22
RABL3-207ENST00000485161 WDR62O43379 1518 aa13.71□□□□□ -0.22
RABL3-207ENST00000485161 WIZO95785 1651 aa13.69□□□□□ -0.22
RABL3-207ENST00000485161 MRC2Q9UBG0 1479 aa13.66□□□□□ -0.22
RABL3-207ENST00000485161 TRIM41Q8WV44 630 aa13.63□□□□□ -0.23
RABL3-207ENST00000485161 CEP164Q9UPV0 1460 aa13.58□□□□□ -0.23
RABL3-207ENST00000485161 FANCD2Q9BXW9 1451 aa13.56□□□□□ -0.24
RABL3-207ENST00000485161 RSF1Q96T23 1441 aaPredicted RBP13.55□□□□□ -0.24
RABL3-207ENST00000485161 CFTRP13569 1480 aa13.49□□□□□ -0.25
RABL3-207ENST00000485161 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
RABL3-207ENST00000485161 FOXD1Q16676 465 aa13.45□□□□□ -0.26
RABL3-207ENST00000485161 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
RABL3-207ENST00000485161 URB2Q14146 1524 aaKnown RBP13.43□□□□□ -0.26
RABL3-207ENST00000485161 RIMBP3CA6NJZ7 1639 aa13.43□□□□□ -0.26
RABL3-207ENST00000485161 RIMBP3BA6NNM3 1639 aa13.43□□□□□ -0.26
RABL3-207ENST00000485161 RIMBP3Q9UFD9 1639 aa13.43□□□□□ -0.26
RABL3-207ENST00000485161 CCDC88BA6NC98 1476 aa13.38□□□□□ -0.27
RABL3-207ENST00000485161 PRDM2Q13029 1718 aa13.37□□□□□ -0.27
RABL3-207ENST00000485161 ARHGEF11O15085 1522 aa13.34□□□□□ -0.27
RABL3-207ENST00000485161 ZNF608Q9ULD9 1512 aaPredicted RBP13.3□□□□□ -0.28
RABL3-207ENST00000485161 IFT140Q96RY7 1462 aa13.3□□□□□ -0.28
RABL3-207ENST00000485161 TOPBP1Q92547 1522 aa13.28□□□□□ -0.28
RABL3-207ENST00000485161 FBLN2P98095 1184 aa13.26□□□□□ -0.29
RABL3-207ENST00000485161 PLPPR3Q6T4P5 718 aa13.25□□□□□ -0.29
RABL3-207ENST00000485161 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
RABL3-207ENST00000485161 ABCC8Q09428 1581 aa13.22□□□□□ -0.29
RABL3-207ENST00000485161 AQRO60306 1485 aaKnown RBP eCLIP13.21□□□□□ -0.29
RABL3-207ENST00000485161 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
RABL3-207ENST00000485161 CHD1O14646 1710 aa13.2□□□□□ -0.3
RABL3-207ENST00000485161 TARBP1Q13395 1621 aaKnown RBP13.19□□□□□ -0.3
RABL3-207ENST00000485161 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
RABL3-207ENST00000485161 CYB5RLQ6IPT4 315 aa13.19□□□□□ -0.3
RABL3-207ENST00000485161 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
RABL3-207ENST00000485161 TDRD9Q8NDG6 1382 aaKnown RBP13.14□□□□□ -0.31
RABL3-207ENST00000485161 POLA1P09884 1462 aaPredicted RBP13.14□□□□□ -0.31
RABL3-207ENST00000485161 SOGA1O94964 1423 aa13.13□□□□□ -0.31
RABL3-207ENST00000485161 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
RABL3-207ENST00000485161 SUPT5HO00267 1087 aaKnown RBP13.09□□□□□ -0.31
RABL3-207ENST00000485161 CLASP1Q7Z460 1538 aa13.09□□□□□ -0.31
RABL3-207ENST00000485161 CHMP7Q8WUX9 453 aaPredicted RBP13.08□□□□□ -0.32
RABL3-207ENST00000485161 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
RABL3-207ENST00000485161 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
RABL3-207ENST00000485161 SNAPC4Q5SXM2 1469 aa13.05□□□□□ -0.32
RABL3-207ENST00000485161 CUX1P39880 1505 aa13.02□□□□□ -0.33
RABL3-207ENST00000485161 GRIN2BQ13224 1484 aa12.98□□□□□ -0.33
RABL3-207ENST00000485161 MAGI1Q96QZ7 1491 aaPredicted RBP12.96□□□□□ -0.33
RABL3-207ENST00000485161 SYNJ1O43426 1573 aa12.96□□□□□ -0.33
RABL3-207ENST00000485161 SYNJ2O15056 1496 aa12.94□□□□□ -0.34
RABL3-207ENST00000485161 GAPVD1Q14C86 1478 aa12.94□□□□□ -0.34
RABL3-207ENST00000485161 PBRM1Q86U86 1689 aa12.88□□□□□ -0.35
RABL3-207ENST00000485161 ABCA10Q8WWZ4 1543 aa12.87□□□□□ -0.35
RABL3-207ENST00000485161 WRNQ14191 1432 aaPredicted RBP eCLIP12.86□□□□□ -0.35
RABL3-207ENST00000485161 PPP6R1Q9UPN7 881 aa12.86□□□□□ -0.35
RABL3-207ENST00000485161 ABCA5Q8WWZ7 1642 aa12.84□□□□□ -0.35
RABL3-207ENST00000485161 ADRA2BP18089 450 aa12.82□□□□□ -0.36
RABL3-207ENST00000485161 GRIN2AQ12879 1464 aa12.81□□□□□ -0.36
RABL3-207ENST00000485161 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
RABL3-207ENST00000485161 MSH5O43196 834 aa12.79□□□□□ -0.36
RABL3-207ENST00000485161 SHROOM2Q13796 1616 aa12.79□□□□□ -0.36
RABL3-207ENST00000485161 KIF13AQ9H1H9 1805 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms