RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 NISCHQ9Y2I1 1504 aa28.97■■■□□ 2.23
COL13A1-209ENST00000484990 ABCC9O60706 1549 aa26.31■■□□□ 1.8
COL13A1-209ENST00000484990 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
COL13A1-209ENST00000484990 RB1CC1Q8TDY2 1594 aa24.97■■□□□ 1.59
COL13A1-209ENST00000484990 DNAJC5BQ9UF47 199 aa24.9■■□□□ 1.58
COL13A1-209ENST00000484990 NACADO15069 1562 aa24.75■■□□□ 1.55
COL13A1-209ENST00000484990 DCAF8L2P0C7V8 631 aa24.72■■□□□ 1.55
COL13A1-209ENST00000484990 PABPN1Q86U42 306 aaKnown RBP eCLIP24.52■■□□□ 1.52
COL13A1-209ENST00000484990 MYO15BQ96JP2 1530 aa24.34■■□□□ 1.49
COL13A1-209ENST00000484990 UNC13AQ9UPW8 1703 aa24.32■■□□□ 1.48
COL13A1-209ENST00000484990 BICRAQ9NZM4 1560 aa24.17■■□□□ 1.46
COL13A1-209ENST00000484990 DCAF1Q9Y4B6 1507 aa23.93■■□□□ 1.42
COL13A1-209ENST00000484990 ZCCHC6Q5VYS8 1495 aaKnown RBP23.93■■□□□ 1.42
COL13A1-209ENST00000484990 SHROOM4Q9ULL8 1493 aa23.89■■□□□ 1.42
COL13A1-209ENST00000484990 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
COL13A1-209ENST00000484990 CC2D2AQ9P2K1 1620 aa23.74■■□□□ 1.39
COL13A1-209ENST00000484990 SCRIBQ14160 1630 aa23.72■■□□□ 1.39
COL13A1-209ENST00000484990 EIF4G1Q04637 1599 aaKnown RBP23.63■■□□□ 1.37
COL13A1-209ENST00000484990 DNAJC5Q9H3Z4 198 aa23.1■■□□□ 1.29
COL13A1-209ENST00000484990 NCAPD3P42695 1498 aa22.86■■□□□ 1.25
COL13A1-209ENST00000484990 CUX2O14529 1486 aa22.79■■□□□ 1.24
COL13A1-209ENST00000484990 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
COL13A1-209ENST00000484990 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
COL13A1-209ENST00000484990 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
COL13A1-209ENST00000484990 HMGXB3Q12766 1538 aa22.62■■□□□ 1.21
COL13A1-209ENST00000484990 SMARCA4P51532 1647 aa22.62■■□□□ 1.21
COL13A1-209ENST00000484990 BAZ1AQ9NRL2 1556 aaPredicted RBP22.52■■□□□ 1.2
COL13A1-209ENST00000484990 BAZ1BQ9UIG0 1483 aaKnown RBP22.52■■□□□ 1.2
COL13A1-209ENST00000484990 NESP48681 1621 aa22.51■■□□□ 1.19
COL13A1-209ENST00000484990 PEG3Q9GZU2 1588 aa22.41■■□□□ 1.18
COL13A1-209ENST00000484990 LAMC3Q9Y6N6 1575 aa22.36■■□□□ 1.17
COL13A1-209ENST00000484990 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
COL13A1-209ENST00000484990 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
COL13A1-209ENST00000484990 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
COL13A1-209ENST00000484990 KIF21AQ7Z4S6 1674 aa22.19■■□□□ 1.14
COL13A1-209ENST00000484990 CADPSQ9ULU8 1353 aa22.18■■□□□ 1.14
COL13A1-209ENST00000484990 MRC2Q9UBG0 1479 aa22.05■■□□□ 1.12
COL13A1-209ENST00000484990 WIZO95785 1651 aa22.01■■□□□ 1.11
COL13A1-209ENST00000484990 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
COL13A1-209ENST00000484990 WDR62O43379 1518 aa21.97■■□□□ 1.11
COL13A1-209ENST00000484990 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
COL13A1-209ENST00000484990 FANCD2Q9BXW9 1451 aa21.89■■□□□ 1.09
COL13A1-209ENST00000484990 CFTRP13569 1480 aa21.84■■□□□ 1.09
COL13A1-209ENST00000484990 OSCARQ8IYS5 282 aa21.83■■□□□ 1.09
COL13A1-209ENST00000484990 RSF1Q96T23 1441 aaPredicted RBP21.79■■□□□ 1.08
COL13A1-209ENST00000484990 TOP2AP11388 1531 aaKnown RBP21.73■■□□□ 1.07
COL13A1-209ENST00000484990 URB2Q14146 1524 aaKnown RBP21.68■■□□□ 1.06
COL13A1-209ENST00000484990 PRDM2Q13029 1718 aa21.55■■□□□ 1.04
COL13A1-209ENST00000484990 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.04
COL13A1-209ENST00000484990 IFT140Q96RY7 1462 aa21.52■■□□□ 1.04
COL13A1-209ENST00000484990 ABCC8Q09428 1581 aa21.46■■□□□ 1.03
COL13A1-209ENST00000484990 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
COL13A1-209ENST00000484990 TOPBP1Q92547 1522 aa21.44■■□□□ 1.02
COL13A1-209ENST00000484990 RIMBP3CA6NJZ7 1639 aa21.41■■□□□ 1.02
COL13A1-209ENST00000484990 RIMBP3BA6NNM3 1639 aa21.41■■□□□ 1.02
COL13A1-209ENST00000484990 RIMBP3Q9UFD9 1639 aa21.41■■□□□ 1.02
COL13A1-209ENST00000484990 ARHGEF11O15085 1522 aa21.34■■□□□ 1.01
COL13A1-209ENST00000484990 DNMBPQ6XZF7 1577 aa21.32■■□□□ 1
COL13A1-209ENST00000484990 CYB5RLQ6IPT4 315 aa21.31■■□□□ 1
COL13A1-209ENST00000484990 EIF4G3O43432 1585 aaKnown RBP21.29■■□□□ 1
COL13A1-209ENST00000484990 AQRO60306 1485 aaKnown RBP eCLIP21.28■■□□□ 1
COL13A1-209ENST00000484990 FBLN2P98095 1184 aa21.28■■□□□ 1
COL13A1-209ENST00000484990 TARBP1Q13395 1621 aaKnown RBP21.22■□□□□ 0.99
COL13A1-209ENST00000484990 POLA1P09884 1462 aaPredicted RBP21.2■□□□□ 0.98
COL13A1-209ENST00000484990 CHD1O14646 1710 aa21.19■□□□□ 0.98
COL13A1-209ENST00000484990 TRHP20396 242 aaPredicted RBP21.17■□□□□ 0.98
COL13A1-209ENST00000484990 SOGA1O94964 1423 aa21.17■□□□□ 0.98
COL13A1-209ENST00000484990 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
COL13A1-209ENST00000484990 TDRD9Q8NDG6 1382 aaKnown RBP21.13■□□□□ 0.97
COL13A1-209ENST00000484990 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
COL13A1-209ENST00000484990 ARAP1Q96P48 1450 aa21.09■□□□□ 0.97
COL13A1-209ENST00000484990 WDR97A6NE52 1622 aa21.04■□□□□ 0.96
COL13A1-209ENST00000484990 FGD5Q6ZNL6 1462 aa21.03■□□□□ 0.96
COL13A1-209ENST00000484990 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
COL13A1-209ENST00000484990 MAGI1Q96QZ7 1491 aaPredicted RBP20.99■□□□□ 0.95
COL13A1-209ENST00000484990 GRIN2BQ13224 1484 aa20.98■□□□□ 0.95
COL13A1-209ENST00000484990 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
COL13A1-209ENST00000484990 CUX1P39880 1505 aa20.95■□□□□ 0.94
COL13A1-209ENST00000484990 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
COL13A1-209ENST00000484990 SYNJ2O15056 1496 aa20.93■□□□□ 0.94
COL13A1-209ENST00000484990 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
COL13A1-209ENST00000484990 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
COL13A1-209ENST00000484990 ABCA10Q8WWZ4 1543 aa20.8■□□□□ 0.92
COL13A1-209ENST00000484990 SUPT5HO00267 1087 aaKnown RBP20.77■□□□□ 0.92
COL13A1-209ENST00000484990 AEBP2Q6ZN18 517 aaPredicted RBP20.76■□□□□ 0.91
COL13A1-209ENST00000484990 WRNQ14191 1432 aaPredicted RBP eCLIP20.72■□□□□ 0.91
COL13A1-209ENST00000484990 ABCA5Q8WWZ7 1642 aa20.72■□□□□ 0.91
COL13A1-209ENST00000484990 GRIN2AQ12879 1464 aa20.68■□□□□ 0.9
COL13A1-209ENST00000484990 FHAD1B1AJZ9 1412 aa20.61■□□□□ 0.89
COL13A1-209ENST00000484990 NUP160Q12769 1436 aa20.61■□□□□ 0.89
COL13A1-209ENST00000484990 TOP2BQ02880 1626 aa20.58■□□□□ 0.89
COL13A1-209ENST00000484990 ADAMTS12P58397 1594 aa20.58■□□□□ 0.88
COL13A1-209ENST00000484990 CEP170Q5SW79 1584 aa20.58■□□□□ 0.88
COL13A1-209ENST00000484990 ERCC6L2Q5T890 1561 aa20.58■□□□□ 0.88
COL13A1-209ENST00000484990 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
COL13A1-209ENST00000484990 ERICH3Q5RHP9 1530 aa20.54■□□□□ 0.88
COL13A1-209ENST00000484990 JPH4Q96JJ6 628 aa20.52■□□□□ 0.88
COL13A1-209ENST00000484990 SHROOM2Q13796 1616 aa20.51■□□□□ 0.87
COL13A1-209ENST00000484990 PRG4Q92954 1404 aaPredicted RBP20.48■□□□□ 0.87
COL13A1-209ENST00000484990 NPM1P06748 294 aaKnown RBP eCLIP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms