RNA–Protein interactions for RNA: ENST00000484468.1

LPP-216, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-216ENST00000484468 NISCHQ9Y2I1 1504 aa18.85■□□□□ 0.61
LPP-216ENST00000484468 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
LPP-216ENST00000484468 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
LPP-216ENST00000484468 ABCC9O60706 1549 aa16.76■□□□□ 0.27
LPP-216ENST00000484468 CHIC1Q5VXU3 224 aa16.4■□□□□ 0.22
LPP-216ENST00000484468 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.15
LPP-216ENST00000484468 NACADO15069 1562 aa15.87■□□□□ 0.13
LPP-216ENST00000484468 DCAF8L2P0C7V8 631 aa15.84■□□□□ 0.13
LPP-216ENST00000484468 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
LPP-216ENST00000484468 ZCCHC6Q5VYS8 1495 aaKnown RBP15.68■□□□□ 0.1
LPP-216ENST00000484468 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
LPP-216ENST00000484468 PABPN1Q86U42 306 aaKnown RBP eCLIP15.62■□□□□ 0.09
LPP-216ENST00000484468 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
LPP-216ENST00000484468 DCAF1Q9Y4B6 1507 aa15.55■□□□□ 0.08
LPP-216ENST00000484468 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
LPP-216ENST00000484468 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
LPP-216ENST00000484468 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.04
LPP-216ENST00000484468 CC2D2AQ9P2K1 1620 aa15.14■□□□□ 0.01
LPP-216ENST00000484468 EIF4G1Q04637 1599 aaKnown RBP15.13■□□□□ 0.01
LPP-216ENST00000484468 CECR2Q9BXF3 1484 aa15.06■□□□□ 0
LPP-216ENST00000484468 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
LPP-216ENST00000484468 SENP3Q9H4L4 574 aaPredicted RBP14.68□□□□□ -0.06
LPP-216ENST00000484468 ATAD2BQ9ULI0 1458 aa14.67□□□□□ -0.06
LPP-216ENST00000484468 NCAPD3P42695 1498 aa14.65□□□□□ -0.06
LPP-216ENST00000484468 SMARCA2P51531 1590 aa14.61□□□□□ -0.07
LPP-216ENST00000484468 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
LPP-216ENST00000484468 HMGXB3Q12766 1538 aa14.59□□□□□ -0.07
LPP-216ENST00000484468 PHF23Q9BUL5 403 aaPredicted RBP14.57□□□□□ -0.08
LPP-216ENST00000484468 MROH2BQ7Z745 1585 aa14.56□□□□□ -0.08
LPP-216ENST00000484468 BAZ1BQ9UIG0 1483 aaKnown RBP14.53□□□□□ -0.08
LPP-216ENST00000484468 PEG3Q9GZU2 1588 aa14.52□□□□□ -0.08
LPP-216ENST00000484468 NESP48681 1621 aa14.44□□□□□ -0.1
LPP-216ENST00000484468 ERCC6Q03468 1493 aa14.44□□□□□ -0.1
LPP-216ENST00000484468 WIZO95785 1651 aa14.39□□□□□ -0.11
LPP-216ENST00000484468 CUX2O14529 1486 aa14.34□□□□□ -0.11
LPP-216ENST00000484468 LAMC3Q9Y6N6 1575 aa14.31□□□□□ -0.12
LPP-216ENST00000484468 RSF1Q96T23 1441 aaPredicted RBP14.28□□□□□ -0.12
LPP-216ENST00000484468 THOC2Q8NI27 1593 aaKnown RBP14.27□□□□□ -0.12
LPP-216ENST00000484468 KIF21AQ7Z4S6 1674 aa14.25□□□□□ -0.13
LPP-216ENST00000484468 CADPSQ9ULU8 1353 aa14.22□□□□□ -0.13
LPP-216ENST00000484468 PDS5BQ9NTI5 1447 aa14.21□□□□□ -0.13
LPP-216ENST00000484468 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
LPP-216ENST00000484468 DNAJC5Q9H3Z4 198 aa14.14□□□□□ -0.15
LPP-216ENST00000484468 MRC2Q9UBG0 1479 aa14.12□□□□□ -0.15
LPP-216ENST00000484468 CFTRP13569 1480 aa14.1□□□□□ -0.15
LPP-216ENST00000484468 FANCD2Q9BXW9 1451 aa14.09□□□□□ -0.15
LPP-216ENST00000484468 CEP164Q9UPV0 1460 aa14.09□□□□□ -0.15
LPP-216ENST00000484468 WDR62O43379 1518 aa14.09□□□□□ -0.15
LPP-216ENST00000484468 CCDC88BA6NC98 1476 aa14.04□□□□□ -0.16
LPP-216ENST00000484468 URB2Q14146 1524 aaKnown RBP13.99□□□□□ -0.17
LPP-216ENST00000484468 PRDM2Q13029 1718 aa13.98□□□□□ -0.17
LPP-216ENST00000484468 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
LPP-216ENST00000484468 DNMBPQ6XZF7 1577 aa13.8□□□□□ -0.2
LPP-216ENST00000484468 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
LPP-216ENST00000484468 IFT140Q96RY7 1462 aa13.79□□□□□ -0.2
LPP-216ENST00000484468 SUPT5HO00267 1087 aaKnown RBP13.76□□□□□ -0.21
LPP-216ENST00000484468 FOXD1Q16676 465 aa13.75□□□□□ -0.21
LPP-216ENST00000484468 ABCC8Q09428 1581 aa13.75□□□□□ -0.21
LPP-216ENST00000484468 EIF4G3O43432 1585 aaKnown RBP13.73□□□□□ -0.21
LPP-216ENST00000484468 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
LPP-216ENST00000484468 TARBP1Q13395 1621 aaKnown RBP13.71□□□□□ -0.22
LPP-216ENST00000484468 CUX1P39880 1505 aa13.68□□□□□ -0.22
LPP-216ENST00000484468 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.22
LPP-216ENST00000484468 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
LPP-216ENST00000484468 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
LPP-216ENST00000484468 FGD5Q6ZNL6 1462 aa13.66□□□□□ -0.22
LPP-216ENST00000484468 TRIM41Q8WV44 630 aa13.65□□□□□ -0.22
LPP-216ENST00000484468 POTEDQ86YR6 584 aa13.63□□□□□ -0.23
LPP-216ENST00000484468 SOGA1O94964 1423 aa13.63□□□□□ -0.23
LPP-216ENST00000484468 TDRD9Q8NDG6 1382 aaKnown RBP13.6□□□□□ -0.23
LPP-216ENST00000484468 CHD1O14646 1710 aa13.59□□□□□ -0.23
LPP-216ENST00000484468 SNAPC4Q5SXM2 1469 aa13.55□□□□□ -0.24
LPP-216ENST00000484468 WDR97A6NE52 1622 aa13.55□□□□□ -0.24
LPP-216ENST00000484468 RIMBP3CA6NJZ7 1639 aa13.55□□□□□ -0.24
LPP-216ENST00000484468 RIMBP3BA6NNM3 1639 aa13.55□□□□□ -0.24
LPP-216ENST00000484468 RIMBP3Q9UFD9 1639 aa13.55□□□□□ -0.24
LPP-216ENST00000484468 FBLN2P98095 1184 aa13.53□□□□□ -0.24
LPP-216ENST00000484468 ARHGEF11O15085 1522 aa13.52□□□□□ -0.25
LPP-216ENST00000484468 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
LPP-216ENST00000484468 GRIN2BQ13224 1484 aa13.49□□□□□ -0.25
LPP-216ENST00000484468 ABCA10Q8WWZ4 1543 aa13.49□□□□□ -0.25
LPP-216ENST00000484468 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
LPP-216ENST00000484468 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
LPP-216ENST00000484468 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
LPP-216ENST00000484468 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
LPP-216ENST00000484468 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
LPP-216ENST00000484468 TOP2BQ02880 1626 aa13.46□□□□□ -0.25
LPP-216ENST00000484468 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.25
LPP-216ENST00000484468 SYNJ2O15056 1496 aa13.44□□□□□ -0.26
LPP-216ENST00000484468 CLASP1Q7Z460 1538 aa13.44□□□□□ -0.26
LPP-216ENST00000484468 CHMP7Q8WUX9 453 aaPredicted RBP13.43□□□□□ -0.26
LPP-216ENST00000484468 ARAP1Q96P48 1450 aa13.42□□□□□ -0.26
LPP-216ENST00000484468 ADAMTS12P58397 1594 aa13.38□□□□□ -0.27
LPP-216ENST00000484468 CYB5RLQ6IPT4 315 aa13.37□□□□□ -0.27
LPP-216ENST00000484468 GRIN2AQ12879 1464 aa13.34□□□□□ -0.27
LPP-216ENST00000484468 ERICH3Q5RHP9 1530 aa13.31□□□□□ -0.28
LPP-216ENST00000484468 CEP170Q5SW79 1584 aa13.31□□□□□ -0.28
LPP-216ENST00000484468 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
LPP-216ENST00000484468 NUP160Q12769 1436 aa13.29□□□□□ -0.28
LPP-216ENST00000484468 ERCC6L2Q5T890 1561 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms