RNA–Protein interactions for RNA: ENST00000484068.5

PHC3-209, Transcript of polyhomeotic homolog 3, humanhuman

TSL 4

Gene PHC3, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-209ENST00000484068 NISCHQ9Y2I1 1504 aa24.24■■□□□ 1.47
PHC3-209ENST00000484068 CCDC180Q9P1Z9 1646 aa21.54■■□□□ 1.04
PHC3-209ENST00000484068 AEBP2Q6ZN18 517 aaPredicted RBP21.39■■□□□ 1.01
PHC3-209ENST00000484068 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
PHC3-209ENST00000484068 ABCC9O60706 1549 aa21.35■■□□□ 1.01
PHC3-209ENST00000484068 DCAF8L2P0C7V8 631 aa20.5■□□□□ 0.87
PHC3-209ENST00000484068 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
PHC3-209ENST00000484068 NACADO15069 1562 aa20.33■□□□□ 0.84
PHC3-209ENST00000484068 ZCCHC6Q5VYS8 1495 aaKnown RBP20.13■□□□□ 0.81
PHC3-209ENST00000484068 MYO15BQ96JP2 1530 aa20.11■□□□□ 0.81
PHC3-209ENST00000484068 DCAF1Q9Y4B6 1507 aa19.98■□□□□ 0.79
PHC3-209ENST00000484068 PABPN1Q86U42 306 aaKnown RBP eCLIP19.98■□□□□ 0.79
PHC3-209ENST00000484068 UNC13AQ9UPW8 1703 aa19.91■□□□□ 0.78
PHC3-209ENST00000484068 BICRAQ9NZM4 1560 aa19.78■□□□□ 0.76
PHC3-209ENST00000484068 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
PHC3-209ENST00000484068 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
PHC3-209ENST00000484068 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
PHC3-209ENST00000484068 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
PHC3-209ENST00000484068 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
PHC3-209ENST00000484068 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
PHC3-209ENST00000484068 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
PHC3-209ENST00000484068 BAZ1AQ9NRL2 1556 aaPredicted RBP18.79■□□□□ 0.6
PHC3-209ENST00000484068 ATAD2BQ9ULI0 1458 aa18.78■□□□□ 0.6
PHC3-209ENST00000484068 NCAPD3P42695 1498 aa18.77■□□□□ 0.6
PHC3-209ENST00000484068 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
PHC3-209ENST00000484068 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
PHC3-209ENST00000484068 MROH2BQ7Z745 1585 aa18.7■□□□□ 0.58
PHC3-209ENST00000484068 BAZ1BQ9UIG0 1483 aaKnown RBP18.63■□□□□ 0.57
PHC3-209ENST00000484068 HMGXB3Q12766 1538 aa18.63■□□□□ 0.57
PHC3-209ENST00000484068 PEG3Q9GZU2 1588 aa18.59■□□□□ 0.57
PHC3-209ENST00000484068 WIZO95785 1651 aa18.5■□□□□ 0.55
PHC3-209ENST00000484068 RSF1Q96T23 1441 aaPredicted RBP18.43■□□□□ 0.54
PHC3-209ENST00000484068 NESP48681 1621 aa18.42■□□□□ 0.54
PHC3-209ENST00000484068 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
PHC3-209ENST00000484068 LAMC3Q9Y6N6 1575 aa18.28■□□□□ 0.52
PHC3-209ENST00000484068 TOP2AP11388 1531 aaKnown RBP18.25■□□□□ 0.51
PHC3-209ENST00000484068 CADPSQ9ULU8 1353 aa18.25■□□□□ 0.51
PHC3-209ENST00000484068 SENP3Q9H4L4 574 aaPredicted RBP18.24■□□□□ 0.51
PHC3-209ENST00000484068 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.51
PHC3-209ENST00000484068 CUX2O14529 1486 aa18.19■□□□□ 0.5
PHC3-209ENST00000484068 KIF21AQ7Z4S6 1674 aa18.15■□□□□ 0.5
PHC3-209ENST00000484068 THOC2Q8NI27 1593 aaKnown RBP18.09■□□□□ 0.49
PHC3-209ENST00000484068 CCDC88BA6NC98 1476 aa18.08■□□□□ 0.49
PHC3-209ENST00000484068 CFTRP13569 1480 aa18.08■□□□□ 0.49
PHC3-209ENST00000484068 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
PHC3-209ENST00000484068 CEP164Q9UPV0 1460 aa18.02■□□□□ 0.48
PHC3-209ENST00000484068 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
PHC3-209ENST00000484068 SUPT5HO00267 1087 aaKnown RBP17.99■□□□□ 0.47
PHC3-209ENST00000484068 WDR62O43379 1518 aa17.93■□□□□ 0.46
PHC3-209ENST00000484068 DNAJC5Q9H3Z4 198 aa17.88■□□□□ 0.45
PHC3-209ENST00000484068 PRDM2Q13029 1718 aa17.88■□□□□ 0.45
PHC3-209ENST00000484068 URB2Q14146 1524 aaKnown RBP17.86■□□□□ 0.45
PHC3-209ENST00000484068 TOPBP1Q92547 1522 aa17.73■□□□□ 0.43
PHC3-209ENST00000484068 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
PHC3-209ENST00000484068 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
PHC3-209ENST00000484068 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
PHC3-209ENST00000484068 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
PHC3-209ENST00000484068 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
PHC3-209ENST00000484068 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
PHC3-209ENST00000484068 CUX1P39880 1505 aa17.54■□□□□ 0.4
PHC3-209ENST00000484068 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
PHC3-209ENST00000484068 SOGA1O94964 1423 aa17.54■□□□□ 0.4
PHC3-209ENST00000484068 FGD5Q6ZNL6 1462 aa17.52■□□□□ 0.4
PHC3-209ENST00000484068 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.399e-6■□□□□ 10.2
PHC3-209ENST00000484068 TARBP1Q13395 1621 aaKnown RBP17.51■□□□□ 0.39
PHC3-209ENST00000484068 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
PHC3-209ENST00000484068 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
PHC3-209ENST00000484068 TDRD9Q8NDG6 1382 aaKnown RBP17.48■□□□□ 0.39
PHC3-209ENST00000484068 FBLN2P98095 1184 aa17.41■□□□□ 0.38
PHC3-209ENST00000484068 WRNQ14191 1432 aaPredicted RBP eCLIP17.39■□□□□ 0.38
PHC3-209ENST00000484068 SYNJ1O43426 1573 aa17.34■□□□□ 0.37
PHC3-209ENST00000484068 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
PHC3-209ENST00000484068 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
PHC3-209ENST00000484068 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
PHC3-209ENST00000484068 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
PHC3-209ENST00000484068 BIVM-ERCC5R4GMW8 1640 aa17.31■□□□□ 0.36
PHC3-209ENST00000484068 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
PHC3-209ENST00000484068 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
PHC3-209ENST00000484068 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
PHC3-209ENST00000484068 CHD1O14646 1710 aa17.3■□□□□ 0.36
PHC3-209ENST00000484068 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
PHC3-209ENST00000484068 MAGI1Q96QZ7 1491 aaPredicted RBP17.25■□□□□ 0.35
PHC3-209ENST00000484068 ABCA5Q8WWZ7 1642 aa17.24■□□□□ 0.35
PHC3-209ENST00000484068 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
PHC3-209ENST00000484068 SYNJ2O15056 1496 aa17.2■□□□□ 0.34
PHC3-209ENST00000484068 RIMBP3CA6NJZ7 1639 aa17.17■□□□□ 0.34
PHC3-209ENST00000484068 RIMBP3BA6NNM3 1639 aa17.17■□□□□ 0.34
PHC3-209ENST00000484068 RIMBP3Q9UFD9 1639 aa17.17■□□□□ 0.34
PHC3-209ENST00000484068 ARHGEF11O15085 1522 aa17.16■□□□□ 0.34
PHC3-209ENST00000484068 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
PHC3-209ENST00000484068 ERICH3Q5RHP9 1530 aa17.09■□□□□ 0.33
PHC3-209ENST00000484068 CLASP1Q7Z460 1538 aa17.09■□□□□ 0.33
PHC3-209ENST00000484068 ADAMTS12P58397 1594 aa17.09■□□□□ 0.33
PHC3-209ENST00000484068 GRIN2AQ12879 1464 aa17.08■□□□□ 0.32
PHC3-209ENST00000484068 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
PHC3-209ENST00000484068 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
PHC3-209ENST00000484068 FOXD1Q16676 465 aa17.04■□□□□ 0.32
PHC3-209ENST00000484068 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
PHC3-209ENST00000484068 IGF1RP08069 1367 aa17.01■□□□□ 0.31
PHC3-209ENST00000484068 CEP170Q5SW79 1584 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms