RNA–Protein interactions for RNA: ENST00000484049.6

CCNC-205, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-205ENST00000484049 AEBP2Q6ZN18 517 aaPredicted RBP27.54■■■□□ 2
CCNC-205ENST00000484049 CHIC1Q5VXU3 224 aa26.24■■□□□ 1.79
CCNC-205ENST00000484049 NISCHQ9Y2I1 1504 aa25.43■■□□□ 1.66
CCNC-205ENST00000484049 SENP3Q9H4L4 574 aaPredicted RBP23.31■■□□□ 1.32
CCNC-205ENST00000484049 ABCC9O60706 1549 aa23.3■■□□□ 1.32
CCNC-205ENST00000484049 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
CCNC-205ENST00000484049 CCDC180Q9P1Z9 1646 aa22.91■■□□□ 1.26
CCNC-205ENST00000484049 DNAJC5BQ9UF47 199 aa22.29■■□□□ 1.16
CCNC-205ENST00000484049 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
CCNC-205ENST00000484049 FOXD1Q16676 465 aa21.8■■□□□ 1.08
CCNC-205ENST00000484049 NACADO15069 1562 aa21.74■■□□□ 1.07
CCNC-205ENST00000484049 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
CCNC-205ENST00000484049 UNC13AQ9UPW8 1703 aa21.57■■□□□ 1.04
CCNC-205ENST00000484049 DCAF8L2P0C7V8 631 aa21.56■■□□□ 1.04
CCNC-205ENST00000484049 BICRAQ9NZM4 1560 aa21.45■■□□□ 1.03
CCNC-205ENST00000484049 MYO15BQ96JP2 1530 aa21.33■■□□□ 1.01
CCNC-205ENST00000484049 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
CCNC-205ENST00000484049 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
CCNC-205ENST00000484049 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
CCNC-205ENST00000484049 SHROOM4Q9ULL8 1493 aa20.98■□□□□ 0.95
CCNC-205ENST00000484049 PLPPR3Q6T4P5 718 aa20.97■□□□□ 0.95
CCNC-205ENST00000484049 DCAF1Q9Y4B6 1507 aa20.95■□□□□ 0.94
CCNC-205ENST00000484049 SCRIBQ14160 1630 aa20.9■□□□□ 0.94
CCNC-205ENST00000484049 EIF4G1Q04637 1599 aaKnown RBP20.9■□□□□ 0.94
CCNC-205ENST00000484049 POTEDQ86YR6 584 aa20.87■□□□□ 0.93
CCNC-205ENST00000484049 DNAJC5Q9H3Z4 198 aa20.61■□□□□ 0.89
CCNC-205ENST00000484049 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.88
CCNC-205ENST00000484049 MSH5O43196 834 aa20.52■□□□□ 0.87
CCNC-205ENST00000484049 ADRA2BP18089 450 aa20.47■□□□□ 0.87
CCNC-205ENST00000484049 PIAS4Q8N2W9 510 aaPredicted RBP20.33■□□□□ 0.84
CCNC-205ENST00000484049 CUX2O14529 1486 aa20.17■□□□□ 0.82
CCNC-205ENST00000484049 NCAPD3P42695 1498 aa20.12■□□□□ 0.81
CCNC-205ENST00000484049 ERCC6Q03468 1493 aa20.06■□□□□ 0.8
CCNC-205ENST00000484049 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.8
CCNC-205ENST00000484049 NESP48681 1621 aa19.97■□□□□ 0.79
CCNC-205ENST00000484049 HMGXB3Q12766 1538 aa19.91■□□□□ 0.78
CCNC-205ENST00000484049 SMARCA4P51532 1647 aa19.9■□□□□ 0.78
CCNC-205ENST00000484049 SMARCA2P51531 1590 aa19.88■□□□□ 0.77
CCNC-205ENST00000484049 THOC2Q8NI27 1593 aaKnown RBP19.8■□□□□ 0.76
CCNC-205ENST00000484049 BAZ1BQ9UIG0 1483 aaKnown RBP19.76■□□□□ 0.75
CCNC-205ENST00000484049 PEG3Q9GZU2 1588 aa19.71■□□□□ 0.75
CCNC-205ENST00000484049 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.75
CCNC-205ENST00000484049 LAMC3Q9Y6N6 1575 aa19.68■□□□□ 0.74
CCNC-205ENST00000484049 KIF21AQ7Z4S6 1674 aa19.66■□□□□ 0.74
CCNC-205ENST00000484049 MROH2BQ7Z745 1585 aa19.62■□□□□ 0.73
CCNC-205ENST00000484049 PDS5BQ9NTI5 1447 aa19.56■□□□□ 0.72
CCNC-205ENST00000484049 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
CCNC-205ENST00000484049 CADPSQ9ULU8 1353 aa19.48■□□□□ 0.71
CCNC-205ENST00000484049 MRC2Q9UBG0 1479 aa19.44■□□□□ 0.7
CCNC-205ENST00000484049 WDR62O43379 1518 aa19.43■□□□□ 0.7
CCNC-205ENST00000484049 WIZO95785 1651 aa19.36■□□□□ 0.69
CCNC-205ENST00000484049 CEP164Q9UPV0 1460 aa19.28■□□□□ 0.68
CCNC-205ENST00000484049 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
CCNC-205ENST00000484049 CFTRP13569 1480 aa19.2■□□□□ 0.66
CCNC-205ENST00000484049 OSCARQ8IYS5 282 aa19.19■□□□□ 0.66
CCNC-205ENST00000484049 URB2Q14146 1524 aaKnown RBP19.17■□□□□ 0.66
CCNC-205ENST00000484049 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.64
CCNC-205ENST00000484049 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
CCNC-205ENST00000484049 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
CCNC-205ENST00000484049 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
CCNC-205ENST00000484049 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
CCNC-205ENST00000484049 ZNF608Q9ULD9 1512 aaPredicted RBP18.99■□□□□ 0.63
CCNC-205ENST00000484049 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
CCNC-205ENST00000484049 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
CCNC-205ENST00000484049 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
CCNC-205ENST00000484049 CCDC88BA6NC98 1476 aa18.88■□□□□ 0.61
CCNC-205ENST00000484049 TOPBP1Q92547 1522 aa18.87■□□□□ 0.61
CCNC-205ENST00000484049 EIF4G3O43432 1585 aaKnown RBP18.82■□□□□ 0.6
CCNC-205ENST00000484049 CYB5RLQ6IPT4 315 aa18.8■□□□□ 0.6
CCNC-205ENST00000484049 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
CCNC-205ENST00000484049 AQRO60306 1485 aaKnown RBP eCLIP18.76■□□□□ 0.59
CCNC-205ENST00000484049 CHD1O14646 1710 aa18.76■□□□□ 0.59
CCNC-205ENST00000484049 TARBP1Q13395 1621 aaKnown RBP18.75■□□□□ 0.59
CCNC-205ENST00000484049 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
CCNC-205ENST00000484049 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
CCNC-205ENST00000484049 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
CCNC-205ENST00000484049 TRHP20396 242 aaPredicted RBP18.66■□□□□ 0.58
CCNC-205ENST00000484049 POLA1P09884 1462 aaPredicted RBP18.65■□□□□ 0.58
CCNC-205ENST00000484049 FBLN2P98095 1184 aa18.64■□□□□ 0.57
CCNC-205ENST00000484049 RAD54L2Q9Y4B4 1467 aa18.63■□□□□ 0.57
CCNC-205ENST00000484049 TDRD9Q8NDG6 1382 aaKnown RBP18.58■□□□□ 0.57
CCNC-205ENST00000484049 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
CCNC-205ENST00000484049 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
CCNC-205ENST00000484049 CLASP1Q7Z460 1538 aa18.55■□□□□ 0.56
CCNC-205ENST00000484049 SOGA1O94964 1423 aa18.55■□□□□ 0.56
CCNC-205ENST00000484049 SNAPC4Q5SXM2 1469 aa18.53■□□□□ 0.56
CCNC-205ENST00000484049 FGD5Q6ZNL6 1462 aa18.48■□□□□ 0.55
CCNC-205ENST00000484049 PPP4R3CPQ6ZMV5 832 aa18.45■□□□□ 0.54
CCNC-205ENST00000484049 CUX1P39880 1505 aa18.45■□□□□ 0.54
CCNC-205ENST00000484049 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
CCNC-205ENST00000484049 CHMP7Q8WUX9 453 aaPredicted RBP18.44■□□□□ 0.54
CCNC-205ENST00000484049 MAGI1Q96QZ7 1491 aaPredicted RBP18.43■□□□□ 0.54
CCNC-205ENST00000484049 SYNJ1O43426 1573 aa18.43■□□□□ 0.54
CCNC-205ENST00000484049 GRIN2BQ13224 1484 aa18.41■□□□□ 0.54
CCNC-205ENST00000484049 SYNJ2O15056 1496 aa18.39■□□□□ 0.53
CCNC-205ENST00000484049 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
CCNC-205ENST00000484049 PBRM1Q86U86 1689 aa18.33■□□□□ 0.52
CCNC-205ENST00000484049 ERCC6L2Q5T890 1561 aa18.29■□□□□ 0.52
CCNC-205ENST00000484049 ABCA5Q8WWZ7 1642 aa18.26■□□□□ 0.51
CCNC-205ENST00000484049 ABCA10Q8WWZ4 1543 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms