RNA–Protein interactions for RNA: ENST00000483839.2

GTPBP4-203, Transcript of GTP binding protein 4, humanhuman

TSL 2

Gene GTPBP4, Length 596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP4-203ENST00000483839 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
GTPBP4-203ENST00000483839 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
GTPBP4-203ENST00000483839 NISCHQ9Y2I1 1504 aa22.78■■□□□ 1.24
GTPBP4-203ENST00000483839 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
GTPBP4-203ENST00000483839 ABCC9O60706 1549 aa21.19■□□□□ 0.98
GTPBP4-203ENST00000483839 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
GTPBP4-203ENST00000483839 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
GTPBP4-203ENST00000483839 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
GTPBP4-203ENST00000483839 FOXD1Q16676 465 aa20.01■□□□□ 0.79
GTPBP4-203ENST00000483839 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
GTPBP4-203ENST00000483839 NACADO15069 1562 aa19.73■□□□□ 0.75
GTPBP4-203ENST00000483839 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
GTPBP4-203ENST00000483839 BICRAQ9NZM4 1560 aa19.57■□□□□ 0.72
GTPBP4-203ENST00000483839 PABPN1Q86U42 306 aaKnown RBP eCLIP19.55■□□□□ 0.72
GTPBP4-203ENST00000483839 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
GTPBP4-203ENST00000483839 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
GTPBP4-203ENST00000483839 DNAJC5Q9H3Z4 198 aa19.25■□□□□ 0.67
GTPBP4-203ENST00000483839 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
GTPBP4-203ENST00000483839 SHROOM4Q9ULL8 1493 aa19.2■□□□□ 0.66
GTPBP4-203ENST00000483839 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
GTPBP4-203ENST00000483839 EIF4G1Q04637 1599 aaKnown RBP19.04■□□□□ 0.64
GTPBP4-203ENST00000483839 PLPPR3Q6T4P5 718 aa18.88■□□□□ 0.61
GTPBP4-203ENST00000483839 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
GTPBP4-203ENST00000483839 ZCCHC6Q5VYS8 1495 aaKnown RBP18.79■□□□□ 0.6
GTPBP4-203ENST00000483839 SCRIBQ14160 1630 aa18.74■□□□□ 0.59
GTPBP4-203ENST00000483839 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
GTPBP4-203ENST00000483839 MSH5O43196 834 aa18.65■□□□□ 0.58
GTPBP4-203ENST00000483839 CUX2O14529 1486 aa18.6■□□□□ 0.57
GTPBP4-203ENST00000483839 PIAS4Q8N2W9 510 aaPredicted RBP18.6■□□□□ 0.57
GTPBP4-203ENST00000483839 ADRA2BP18089 450 aa18.57■□□□□ 0.56
GTPBP4-203ENST00000483839 POTEDQ86YR6 584 aa18.45■□□□□ 0.54
GTPBP4-203ENST00000483839 NCAPD3P42695 1498 aa18.25■□□□□ 0.51
GTPBP4-203ENST00000483839 ERCC6Q03468 1493 aa18.24■□□□□ 0.51
GTPBP4-203ENST00000483839 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
GTPBP4-203ENST00000483839 NESP48681 1621 aa18.1■□□□□ 0.49
GTPBP4-203ENST00000483839 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
GTPBP4-203ENST00000483839 HMGXB3Q12766 1538 aa18.07■□□□□ 0.48
GTPBP4-203ENST00000483839 SMARCA2P51531 1590 aa17.95■□□□□ 0.46
GTPBP4-203ENST00000483839 SMARCA4P51532 1647 aa17.92■□□□□ 0.46
GTPBP4-203ENST00000483839 TRIM41Q8WV44 630 aa17.91■□□□□ 0.46
GTPBP4-203ENST00000483839 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
GTPBP4-203ENST00000483839 LAMC3Q9Y6N6 1575 aa17.9■□□□□ 0.46
GTPBP4-203ENST00000483839 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
GTPBP4-203ENST00000483839 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
GTPBP4-203ENST00000483839 WDR62O43379 1518 aa17.72■□□□□ 0.43
GTPBP4-203ENST00000483839 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.43
GTPBP4-203ENST00000483839 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
GTPBP4-203ENST00000483839 MRC2Q9UBG0 1479 aa17.65■□□□□ 0.42
GTPBP4-203ENST00000483839 CADPSQ9ULU8 1353 aa17.57■□□□□ 0.4
GTPBP4-203ENST00000483839 MROH2BQ7Z745 1585 aa17.54■□□□□ 0.4
GTPBP4-203ENST00000483839 RIMBP3CA6NJZ7 1639 aa17.5■□□□□ 0.39
GTPBP4-203ENST00000483839 RIMBP3BA6NNM3 1639 aa17.5■□□□□ 0.39
GTPBP4-203ENST00000483839 RIMBP3Q9UFD9 1639 aa17.5■□□□□ 0.39
GTPBP4-203ENST00000483839 OSCARQ8IYS5 282 aa17.48■□□□□ 0.39
GTPBP4-203ENST00000483839 CEP164Q9UPV0 1460 aa17.42■□□□□ 0.38
GTPBP4-203ENST00000483839 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
GTPBP4-203ENST00000483839 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
GTPBP4-203ENST00000483839 URB2Q14146 1524 aaKnown RBP17.34■□□□□ 0.37
GTPBP4-203ENST00000483839 CFTRP13569 1480 aa17.31■□□□□ 0.36
GTPBP4-203ENST00000483839 WIZO95785 1651 aa17.29■□□□□ 0.36
GTPBP4-203ENST00000483839 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
GTPBP4-203ENST00000483839 ARAP1Q96P48 1450 aa17.18■□□□□ 0.34
GTPBP4-203ENST00000483839 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
GTPBP4-203ENST00000483839 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
GTPBP4-203ENST00000483839 MAPK8IP2Q13387 824 aaPredicted RBP17.12■□□□□ 0.33
GTPBP4-203ENST00000483839 CHD1O14646 1710 aa17.1■□□□□ 0.33
GTPBP4-203ENST00000483839 EIF4G3O43432 1585 aaKnown RBP17.09■□□□□ 0.33
GTPBP4-203ENST00000483839 CYB5RLQ6IPT4 315 aa17.08■□□□□ 0.32
GTPBP4-203ENST00000483839 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
GTPBP4-203ENST00000483839 TOP2AP11388 1531 aaKnown RBP17.03■□□□□ 0.32
GTPBP4-203ENST00000483839 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
GTPBP4-203ENST00000483839 TARBP1Q13395 1621 aaKnown RBP17■□□□□ 0.31
GTPBP4-203ENST00000483839 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
GTPBP4-203ENST00000483839 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
GTPBP4-203ENST00000483839 CLASP1Q7Z460 1538 aa16.94■□□□□ 0.3
GTPBP4-203ENST00000483839 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
GTPBP4-203ENST00000483839 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.34e-7■■■■□ 22
GTPBP4-203ENST00000483839 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
GTPBP4-203ENST00000483839 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
GTPBP4-203ENST00000483839 CCDC88BA6NC98 1476 aa16.81■□□□□ 0.28
GTPBP4-203ENST00000483839 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
GTPBP4-203ENST00000483839 FBLN2P98095 1184 aa16.76■□□□□ 0.27
GTPBP4-203ENST00000483839 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
GTPBP4-203ENST00000483839 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
GTPBP4-203ENST00000483839 SNAPC4Q5SXM2 1469 aa16.72■□□□□ 0.27
GTPBP4-203ENST00000483839 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
GTPBP4-203ENST00000483839 MAGI1Q96QZ7 1491 aaPredicted RBP16.68■□□□□ 0.26
GTPBP4-203ENST00000483839 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
GTPBP4-203ENST00000483839 TDRD9Q8NDG6 1382 aaKnown RBP16.65■□□□□ 0.26
GTPBP4-203ENST00000483839 KIF13AQ9H1H9 1805 aa16.63■□□□□ 0.25
GTPBP4-203ENST00000483839 SYNJ2O15056 1496 aa16.62■□□□□ 0.25
GTPBP4-203ENST00000483839 SOGA1O94964 1423 aa16.61■□□□□ 0.25
GTPBP4-203ENST00000483839 CHMP7Q8WUX9 453 aaPredicted RBP16.6■□□□□ 0.25
GTPBP4-203ENST00000483839 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
GTPBP4-203ENST00000483839 PPP4R3CPQ6ZMV5 832 aa16.58■□□□□ 0.24
GTPBP4-203ENST00000483839 GRIN2BQ13224 1484 aa16.58■□□□□ 0.24
GTPBP4-203ENST00000483839 FGD5Q6ZNL6 1462 aa16.57■□□□□ 0.24
GTPBP4-203ENST00000483839 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
GTPBP4-203ENST00000483839 CUX1P39880 1505 aa16.52■□□□□ 0.24
GTPBP4-203ENST00000483839 SHROOM2Q13796 1616 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms