RNA–Protein interactions for RNA: ENST00000483538.1

POLR1A-207, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-207ENST00000483538 NISCHQ9Y2I1 1504 aa22■■□□□ 1.11
POLR1A-207ENST00000483538 CCDC180Q9P1Z9 1646 aa19.64■□□□□ 0.73
POLR1A-207ENST00000483538 ABCC9O60706 1549 aa19.06■□□□□ 0.64
POLR1A-207ENST00000483538 ZCCHC6Q5VYS8 1495 aaKnown RBP18.37■□□□□ 0.53
POLR1A-207ENST00000483538 RB1CC1Q8TDY2 1594 aa18.37■□□□□ 0.53
POLR1A-207ENST00000483538 NACADO15069 1562 aa18.36■□□□□ 0.53
POLR1A-207ENST00000483538 MYO15BQ96JP2 1530 aa18.27■□□□□ 0.51
POLR1A-207ENST00000483538 DCAF1Q9Y4B6 1507 aa18.21■□□□□ 0.51
POLR1A-207ENST00000483538 UNC13AQ9UPW8 1703 aa18.15■□□□□ 0.5
POLR1A-207ENST00000483538 DCAF8L2P0C7V8 631 aa18.1■□□□□ 0.49
POLR1A-207ENST00000483538 BICRAQ9NZM4 1560 aa17.93■□□□□ 0.46
POLR1A-207ENST00000483538 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
POLR1A-207ENST00000483538 PABPN1Q86U42 306 aaKnown RBP eCLIP17.73■□□□□ 0.43
POLR1A-207ENST00000483538 SHROOM4Q9ULL8 1493 aa17.63■□□□□ 0.41
POLR1A-207ENST00000483538 DNAJC5BQ9UF47 199 aa17.46■□□□□ 0.39
POLR1A-207ENST00000483538 EIF4G1Q04637 1599 aaKnown RBP17.39■□□□□ 0.37
POLR1A-207ENST00000483538 CC2D2AQ9P2K1 1620 aa17.31■□□□□ 0.36
POLR1A-207ENST00000483538 CECR2Q9BXF3 1484 aa17.14■□□□□ 0.33
POLR1A-207ENST00000483538 SMARCA4P51532 1647 aa17.11■□□□□ 0.33
POLR1A-207ENST00000483538 BAZ1AQ9NRL2 1556 aaPredicted RBP17.03■□□□□ 0.32
POLR1A-207ENST00000483538 MROH2BQ7Z745 1585 aa16.98■□□□□ 0.31
POLR1A-207ENST00000483538 PEG3Q9GZU2 1588 aa16.96■□□□□ 0.31
POLR1A-207ENST00000483538 ATAD2BQ9ULI0 1458 aa16.93■□□□□ 0.3
POLR1A-207ENST00000483538 SMARCA2P51531 1590 aa16.92■□□□□ 0.3
POLR1A-207ENST00000483538 NCAPD3P42695 1498 aa16.92■□□□□ 0.3
POLR1A-207ENST00000483538 HMGXB3Q12766 1538 aa16.9■□□□□ 0.3
POLR1A-207ENST00000483538 WIZO95785 1651 aa16.83■□□□□ 0.28
POLR1A-207ENST00000483538 BAZ1BQ9UIG0 1483 aaKnown RBP16.78■□□□□ 0.28
POLR1A-207ENST00000483538 RSF1Q96T23 1441 aaPredicted RBP16.73■□□□□ 0.27
POLR1A-207ENST00000483538 TOP2AP11388 1531 aaKnown RBP16.62■□□□□ 0.25
POLR1A-207ENST00000483538 NESP48681 1621 aa16.56■□□□□ 0.24
POLR1A-207ENST00000483538 LAMC3Q9Y6N6 1575 aa16.51■□□□□ 0.23
POLR1A-207ENST00000483538 KIF21AQ7Z4S6 1674 aa16.45■□□□□ 0.22
POLR1A-207ENST00000483538 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
POLR1A-207ENST00000483538 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
POLR1A-207ENST00000483538 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
POLR1A-207ENST00000483538 CADPSQ9ULU8 1353 aa16.37■□□□□ 0.21
POLR1A-207ENST00000483538 ERCC6Q03468 1493 aa16.36■□□□□ 0.21
POLR1A-207ENST00000483538 CFTRP13569 1480 aa16.35■□□□□ 0.21
POLR1A-207ENST00000483538 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
POLR1A-207ENST00000483538 CUX2O14529 1486 aa16.24■□□□□ 0.19
POLR1A-207ENST00000483538 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
POLR1A-207ENST00000483538 CEP164Q9UPV0 1460 aa16.21■□□□□ 0.19
POLR1A-207ENST00000483538 WDR62O43379 1518 aa16.2■□□□□ 0.18
POLR1A-207ENST00000483538 MRC2Q9UBG0 1479 aa16.19■□□□□ 0.18
POLR1A-207ENST00000483538 SUPT5HO00267 1087 aaKnown RBP16.17■□□□□ 0.18
POLR1A-207ENST00000483538 URB2Q14146 1524 aaKnown RBP16.13■□□□□ 0.17
POLR1A-207ENST00000483538 DNMBPQ6XZF7 1577 aa16.01■□□□□ 0.15
POLR1A-207ENST00000483538 TOPBP1Q92547 1522 aa16■□□□□ 0.15
POLR1A-207ENST00000483538 CUX1P39880 1505 aa15.93■□□□□ 0.14
POLR1A-207ENST00000483538 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
POLR1A-207ENST00000483538 TARBP1Q13395 1621 aaKnown RBP15.91■□□□□ 0.14
POLR1A-207ENST00000483538 POLA1P09884 1462 aaPredicted RBP15.88■□□□□ 0.13
POLR1A-207ENST00000483538 WDR97A6NE52 1622 aa15.86■□□□□ 0.13
POLR1A-207ENST00000483538 BIVM-ERCC5R4GMW8 1640 aa15.85■□□□□ 0.13
POLR1A-207ENST00000483538 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
POLR1A-207ENST00000483538 EIF4G3O43432 1585 aaKnown RBP15.84■□□□□ 0.13
POLR1A-207ENST00000483538 FGD5Q6ZNL6 1462 aa15.84■□□□□ 0.13
POLR1A-207ENST00000483538 ZNF608Q9ULD9 1512 aaPredicted RBP15.84■□□□□ 0.13
POLR1A-207ENST00000483538 SYNJ1O43426 1573 aa15.83■□□□□ 0.13
POLR1A-207ENST00000483538 TOP2BQ02880 1626 aa15.8■□□□□ 0.12
POLR1A-207ENST00000483538 RAD54L2Q9Y4B4 1467 aa15.78■□□□□ 0.12
POLR1A-207ENST00000483538 WRNQ14191 1432 aaPredicted RBP eCLIP15.74■□□□□ 0.11
POLR1A-207ENST00000483538 SOGA1O94964 1423 aa15.71■□□□□ 0.11
POLR1A-207ENST00000483538 ABCA5Q8WWZ7 1642 aa15.71■□□□□ 0.11
POLR1A-207ENST00000483538 PBRM1Q86U86 1689 aa15.7■□□□□ 0.1
POLR1A-207ENST00000483538 AQRO60306 1485 aaKnown RBP eCLIP15.69■□□□□ 0.15e-8■■■□□ 17.4
POLR1A-207ENST00000483538 ABCA10Q8WWZ4 1543 aa15.67■□□□□ 0.1
POLR1A-207ENST00000483538 CHD1O14646 1710 aa15.66■□□□□ 0.1
POLR1A-207ENST00000483538 TDRD9Q8NDG6 1382 aaKnown RBP15.63■□□□□ 0.09
POLR1A-207ENST00000483538 DNAJC5Q9H3Z4 198 aa15.63■□□□□ 0.09
POLR1A-207ENST00000483538 SNAPC4Q5SXM2 1469 aa15.59■□□□□ 0.09
POLR1A-207ENST00000483538 GRIN2BQ13224 1484 aa15.57■□□□□ 0.08
POLR1A-207ENST00000483538 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
POLR1A-207ENST00000483538 MAGI1Q96QZ7 1491 aaPredicted RBP15.55■□□□□ 0.08
POLR1A-207ENST00000483538 ADAMTS12P58397 1594 aa15.53■□□□□ 0.08
POLR1A-207ENST00000483538 ERICH3Q5RHP9 1530 aa15.48■□□□□ 0.07
POLR1A-207ENST00000483538 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
POLR1A-207ENST00000483538 CLASP1Q7Z460 1538 aa15.46■□□□□ 0.07
POLR1A-207ENST00000483538 OSCARQ8IYS5 282 aa15.42■□□□□ 0.06
POLR1A-207ENST00000483538 GRIN2AQ12879 1464 aa15.41■□□□□ 0.06
POLR1A-207ENST00000483538 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
POLR1A-207ENST00000483538 RIMBP3CA6NJZ7 1639 aa15.4■□□□□ 0.06
POLR1A-207ENST00000483538 RIMBP3BA6NNM3 1639 aa15.4■□□□□ 0.06
POLR1A-207ENST00000483538 RIMBP3Q9UFD9 1639 aa15.4■□□□□ 0.06
POLR1A-207ENST00000483538 CUL7Q14999 1698 aa15.39■□□□□ 0.05
POLR1A-207ENST00000483538 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
POLR1A-207ENST00000483538 KIF27Q86VH2 1401 aa15.37■□□□□ 0.05
POLR1A-207ENST00000483538 ARHGEF11O15085 1522 aa15.36■□□□□ 0.05
POLR1A-207ENST00000483538 RUSC2Q8N2Y8 1516 aa15.35■□□□□ 0.05
POLR1A-207ENST00000483538 FBLN2P98095 1184 aa15.35■□□□□ 0.05
POLR1A-207ENST00000483538 NUP160Q12769 1436 aa15.34■□□□□ 0.05
POLR1A-207ENST00000483538 CHMP7Q8WUX9 453 aaPredicted RBP15.32■□□□□ 0.04
POLR1A-207ENST00000483538 IGF1RP08069 1367 aa15.32■□□□□ 0.04
POLR1A-207ENST00000483538 SHROOM2Q13796 1616 aa15.32■□□□□ 0.04
POLR1A-207ENST00000483538 ERCC6L2Q5T890 1561 aa15.26■□□□□ 0.03
POLR1A-207ENST00000483538 ARAP1Q96P48 1450 aa15.25■□□□□ 0.03
POLR1A-207ENST00000483538 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
POLR1A-207ENST00000483538 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
POLR1A-207ENST00000483538 CTTNBP2Q8WZ74 1663 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms