RNA–Protein interactions for RNA: ENST00000483327.5

SUMF2-216, Transcript of sulfatase modifying factor 2, humanhuman

TSL 2

Gene SUMF2, Length 1,195 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF2-216ENST00000483327 NISCHQ9Y2I1 1504 aa32.16■■■□□ 2.74
SUMF2-216ENST00000483327 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.18
SUMF2-216ENST00000483327 ABCC9O60706 1549 aa27.83■■■□□ 2.05
SUMF2-216ENST00000483327 ZCCHC6Q5VYS8 1495 aaKnown RBP26.86■■□□□ 1.89
SUMF2-216ENST00000483327 RB1CC1Q8TDY2 1594 aa26.77■■□□□ 1.88
SUMF2-216ENST00000483327 NACADO15069 1562 aa26.73■■□□□ 1.87
SUMF2-216ENST00000483327 DCAF8L2P0C7V8 631 aa26.66■■□□□ 1.86
SUMF2-216ENST00000483327 UNC13AQ9UPW8 1703 aa26.58■■□□□ 1.85
SUMF2-216ENST00000483327 MYO15BQ96JP2 1530 aa26.54■■□□□ 1.84
SUMF2-216ENST00000483327 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
SUMF2-216ENST00000483327 SCRIBQ14160 1630 aa26.21■■□□□ 1.79
SUMF2-216ENST00000483327 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
SUMF2-216ENST00000483327 PABPN1Q86U42 306 aaKnown RBP eCLIP25.94■■□□□ 1.74
SUMF2-216ENST00000483327 DNAJC5BQ9UF47 199 aa25.68■■□□□ 1.7
SUMF2-216ENST00000483327 SHROOM4Q9ULL8 1493 aa25.56■■□□□ 1.68
SUMF2-216ENST00000483327 EIF4G1Q04637 1599 aaKnown RBP25.34■■□□□ 1.65
SUMF2-216ENST00000483327 CC2D2AQ9P2K1 1620 aa25.24■■□□□ 1.63
SUMF2-216ENST00000483327 CECR2Q9BXF3 1484 aa25.12■■□□□ 1.61
SUMF2-216ENST00000483327 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
SUMF2-216ENST00000483327 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
SUMF2-216ENST00000483327 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
SUMF2-216ENST00000483327 WIZO95785 1651 aa24.73■■□□□ 1.55
SUMF2-216ENST00000483327 ATAD2BQ9ULI0 1458 aa24.72■■□□□ 1.55
SUMF2-216ENST00000483327 PEG3Q9GZU2 1588 aa24.7■■□□□ 1.54
SUMF2-216ENST00000483327 SMARCA2P51531 1590 aa24.67■■□□□ 1.54
SUMF2-216ENST00000483327 HMGXB3Q12766 1538 aa24.61■■□□□ 1.53
SUMF2-216ENST00000483327 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
SUMF2-216ENST00000483327 BAZ1BQ9UIG0 1483 aaKnown RBP24.53■■□□□ 1.52
SUMF2-216ENST00000483327 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
SUMF2-216ENST00000483327 TOP2AP11388 1531 aaKnown RBP24.32■■□□□ 1.48
SUMF2-216ENST00000483327 NESP48681 1621 aa24.2■■□□□ 1.46
SUMF2-216ENST00000483327 KIF21AQ7Z4S6 1674 aa24.08■■□□□ 1.44
SUMF2-216ENST00000483327 LAMC3Q9Y6N6 1575 aa24.03■■□□□ 1.44
SUMF2-216ENST00000483327 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
SUMF2-216ENST00000483327 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
SUMF2-216ENST00000483327 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
SUMF2-216ENST00000483327 CADPSQ9ULU8 1353 aa23.87■■□□□ 1.41
SUMF2-216ENST00000483327 ERCC6Q03468 1493 aa23.86■■□□□ 1.41
SUMF2-216ENST00000483327 THOC2Q8NI27 1593 aaKnown RBP23.86■■□□□ 1.41
SUMF2-216ENST00000483327 CFTRP13569 1480 aa23.83■■□□□ 1.41
SUMF2-216ENST00000483327 FANCD2Q9BXW9 1451 aa23.7■■□□□ 1.38
SUMF2-216ENST00000483327 PDS5BQ9NTI5 1447 aa23.7■■□□□ 1.38
SUMF2-216ENST00000483327 CUX2O14529 1486 aa23.65■■□□□ 1.38
SUMF2-216ENST00000483327 CEP164Q9UPV0 1460 aa23.65■■□□□ 1.38
SUMF2-216ENST00000483327 MRC2Q9UBG0 1479 aa23.59■■□□□ 1.37
SUMF2-216ENST00000483327 WDR62O43379 1518 aa23.58■■□□□ 1.36
SUMF2-216ENST00000483327 URB2Q14146 1524 aaKnown RBP23.54■■□□□ 1.36
SUMF2-216ENST00000483327 DNMBPQ6XZF7 1577 aa23.4■■□□□ 1.34
SUMF2-216ENST00000483327 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
SUMF2-216ENST00000483327 ABCC8Q09428 1581 aa23.34■■□□□ 1.33
SUMF2-216ENST00000483327 CUX1P39880 1505 aa23.33■■□□□ 1.32
SUMF2-216ENST00000483327 DNAJC5Q9H3Z4 198 aa23.26■■□□□ 1.31
SUMF2-216ENST00000483327 SYNJ1O43426 1573 aa23.25■■□□□ 1.31
SUMF2-216ENST00000483327 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
SUMF2-216ENST00000483327 BIVM-ERCC5R4GMW8 1640 aa23.22■■□□□ 1.31
SUMF2-216ENST00000483327 POLA1P09884 1462 aaPredicted RBP23.2■■□□□ 1.3
SUMF2-216ENST00000483327 WDR97A6NE52 1622 aa23.19■■□□□ 1.3
SUMF2-216ENST00000483327 FGD5Q6ZNL6 1462 aa23.18■■□□□ 1.3
SUMF2-216ENST00000483327 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
SUMF2-216ENST00000483327 ZNF608Q9ULD9 1512 aaPredicted RBP23.14■■□□□ 1.3
SUMF2-216ENST00000483327 EIF4G3O43432 1585 aaKnown RBP23.14■■□□□ 1.29
SUMF2-216ENST00000483327 RAD54L2Q9Y4B4 1467 aa23.13■■□□□ 1.29
SUMF2-216ENST00000483327 WRNQ14191 1432 aaPredicted RBP eCLIP23.09■■□□□ 1.29
SUMF2-216ENST00000483327 IFT140Q96RY7 1462 aa23.09■■□□□ 1.29
SUMF2-216ENST00000483327 PBRM1Q86U86 1689 aa23■■□□□ 1.27
SUMF2-216ENST00000483327 SOGA1O94964 1423 aa22.98■■□□□ 1.27
SUMF2-216ENST00000483327 AQRO60306 1485 aaKnown RBP eCLIP22.95■■□□□ 1.262e-9■■■■■ 39.4
SUMF2-216ENST00000483327 ABCA5Q8WWZ7 1642 aa22.95■■□□□ 1.26
SUMF2-216ENST00000483327 CHD1O14646 1710 aa22.93■■□□□ 1.26
SUMF2-216ENST00000483327 ABCA10Q8WWZ4 1543 aa22.89■■□□□ 1.26
SUMF2-216ENST00000483327 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.25
SUMF2-216ENST00000483327 SNAPC4Q5SXM2 1469 aa22.78■■□□□ 1.24
SUMF2-216ENST00000483327 GAPVD1Q14C86 1478 aa22.77■■□□□ 1.24
SUMF2-216ENST00000483327 GRIN2BQ13224 1484 aa22.72■■□□□ 1.23
SUMF2-216ENST00000483327 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
SUMF2-216ENST00000483327 MAGI1Q96QZ7 1491 aaPredicted RBP22.65■■□□□ 1.22
SUMF2-216ENST00000483327 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
SUMF2-216ENST00000483327 ERICH3Q5RHP9 1530 aa22.61■■□□□ 1.21
SUMF2-216ENST00000483327 SYNJ2O15056 1496 aa22.58■■□□□ 1.2
SUMF2-216ENST00000483327 CUL7Q14999 1698 aa22.54■■□□□ 1.2
SUMF2-216ENST00000483327 KIF27Q86VH2 1401 aa22.52■■□□□ 1.2
SUMF2-216ENST00000483327 FBLN2P98095 1184 aa22.52■■□□□ 1.2
SUMF2-216ENST00000483327 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
SUMF2-216ENST00000483327 CEP170Q5SW79 1584 aa22.51■■□□□ 1.19
SUMF2-216ENST00000483327 CLASP1Q7Z460 1538 aa22.5■■□□□ 1.19
SUMF2-216ENST00000483327 GRIN2AQ12879 1464 aa22.49■■□□□ 1.19
SUMF2-216ENST00000483327 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
SUMF2-216ENST00000483327 FHAD1B1AJZ9 1412 aa22.45■■□□□ 1.18
SUMF2-216ENST00000483327 OSCARQ8IYS5 282 aa22.44■■□□□ 1.18
SUMF2-216ENST00000483327 IGF1RP08069 1367 aa22.43■■□□□ 1.18
SUMF2-216ENST00000483327 RIMBP3CA6NJZ7 1639 aa22.42■■□□□ 1.18
SUMF2-216ENST00000483327 RIMBP3BA6NNM3 1639 aa22.42■■□□□ 1.18
SUMF2-216ENST00000483327 RIMBP3Q9UFD9 1639 aa22.42■■□□□ 1.18
SUMF2-216ENST00000483327 CHMP7Q8WUX9 453 aaPredicted RBP22.41■■□□□ 1.18
SUMF2-216ENST00000483327 NUP160Q12769 1436 aa22.36■■□□□ 1.17
SUMF2-216ENST00000483327 ARHGEF11O15085 1522 aa22.34■■□□□ 1.17
SUMF2-216ENST00000483327 SHROOM2Q13796 1616 aa22.32■■□□□ 1.16
SUMF2-216ENST00000483327 ERCC6L2Q5T890 1561 aa22.32■■□□□ 1.16
SUMF2-216ENST00000483327 CTTNBP2Q8WZ74 1663 aa22.31■■□□□ 1.16
SUMF2-216ENST00000483327 CARMIL1Q5VZK9 1371 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms