RNA–Protein interactions for RNA: ENST00000483064.1

SNCG-204, Transcript of synuclein gamma, humanhuman

TSL 2

Gene SNCG, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-204ENST00000483064 NISCHQ9Y2I1 1504 aa36.29■■■■□ 3.4
SNCG-204ENST00000483064 ABCC9O60706 1549 aa32.73■■■□□ 2.83
SNCG-204ENST00000483064 CCDC180Q9P1Z9 1646 aa32.52■■■□□ 2.8
SNCG-204ENST00000483064 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
SNCG-204ENST00000483064 NACADO15069 1562 aa30.85■■■□□ 2.53
SNCG-204ENST00000483064 DCAF8L2P0C7V8 631 aa30.85■■■□□ 2.53
SNCG-204ENST00000483064 DNAJC5BQ9UF47 199 aa30.81■■■□□ 2.52
SNCG-204ENST00000483064 PABPN1Q86U42 306 aaKnown RBP eCLIP30.52■■■□□ 2.48
SNCG-204ENST00000483064 MYO15BQ96JP2 1530 aa30.39■■■□□ 2.46
SNCG-204ENST00000483064 UNC13AQ9UPW8 1703 aa30.21■■■□□ 2.43
SNCG-204ENST00000483064 BICRAQ9NZM4 1560 aa30.11■■■□□ 2.41
SNCG-204ENST00000483064 ZCCHC6Q5VYS8 1495 aaKnown RBP30.04■■■□□ 2.4
SNCG-204ENST00000483064 DCAF1Q9Y4B6 1507 aa29.96■■■□□ 2.39
SNCG-204ENST00000483064 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
SNCG-204ENST00000483064 SCRIBQ14160 1630 aa29.68■■■□□ 2.34
SNCG-204ENST00000483064 CECR2Q9BXF3 1484 aa29.5■■■□□ 2.31
SNCG-204ENST00000483064 CC2D2AQ9P2K1 1620 aa29.5■■■□□ 2.31
SNCG-204ENST00000483064 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
SNCG-204ENST00000483064 NCAPD3P42695 1498 aa28.51■■■□□ 2.15
SNCG-204ENST00000483064 DNAJC5Q9H3Z4 198 aa28.4■■■□□ 2.14
SNCG-204ENST00000483064 ATAD2BQ9ULI0 1458 aa28.4■■■□□ 2.14
SNCG-204ENST00000483064 ERCC6Q03468 1493 aa28.31■■■□□ 2.12
SNCG-204ENST00000483064 SMARCA2P51531 1590 aa28.31■■■□□ 2.12
SNCG-204ENST00000483064 SMARCA4P51532 1647 aa28.29■■■□□ 2.12
SNCG-204ENST00000483064 HMGXB3Q12766 1538 aa28.24■■■□□ 2.11
SNCG-204ENST00000483064 CUX2O14529 1486 aa28.24■■■□□ 2.11
SNCG-204ENST00000483064 BAZ1AQ9NRL2 1556 aaPredicted RBP28.18■■■□□ 2.1
SNCG-204ENST00000483064 BAZ1BQ9UIG0 1483 aaKnown RBP28.14■■■□□ 2.09
SNCG-204ENST00000483064 NESP48681 1621 aa28.06■■■□□ 2.08
SNCG-204ENST00000483064 PEG3Q9GZU2 1588 aa28.01■■■□□ 2.07
SNCG-204ENST00000483064 MROH2BQ7Z745 1585 aa27.95■■■□□ 2.07
SNCG-204ENST00000483064 LAMC3Q9Y6N6 1575 aa27.84■■■□□ 2.05
SNCG-204ENST00000483064 PDS5BQ9NTI5 1447 aa27.77■■■□□ 2.04
SNCG-204ENST00000483064 THOC2Q8NI27 1593 aaKnown RBP27.72■■■□□ 2.03
SNCG-204ENST00000483064 CADPSQ9ULU8 1353 aa27.67■■■□□ 2.02
SNCG-204ENST00000483064 KIF21AQ7Z4S6 1674 aa27.6■■■□□ 2.01
SNCG-204ENST00000483064 WIZO95785 1651 aa27.57■■■□□ 2
SNCG-204ENST00000483064 MRC2Q9UBG0 1479 aa27.49■■□□□ 1.99
SNCG-204ENST00000483064 RSF1Q96T23 1441 aaPredicted RBP27.38■■□□□ 1.97
SNCG-204ENST00000483064 WDR62O43379 1518 aa27.37■■□□□ 1.97
SNCG-204ENST00000483064 CEP164Q9UPV0 1460 aa27.37■■□□□ 1.97
SNCG-204ENST00000483064 FANCD2Q9BXW9 1451 aa27.33■■□□□ 1.97
SNCG-204ENST00000483064 CFTRP13569 1480 aa27.3■■□□□ 1.96
SNCG-204ENST00000483064 TOP2AP11388 1531 aaKnown RBP27.26■■□□□ 1.95
SNCG-204ENST00000483064 TRIM41Q8WV44 630 aa27.15■■□□□ 1.94
SNCG-204ENST00000483064 URB2Q14146 1524 aaKnown RBP27.08■■□□□ 1.93
SNCG-204ENST00000483064 OSCARQ8IYS5 282 aa27.04■■□□□ 1.92
SNCG-204ENST00000483064 CCDC88BA6NC98 1476 aa26.99■■□□□ 1.91
SNCG-204ENST00000483064 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
SNCG-204ENST00000483064 IFT140Q96RY7 1462 aa26.83■■□□□ 1.89
SNCG-204ENST00000483064 TOPBP1Q92547 1522 aa26.78■■□□□ 1.88
SNCG-204ENST00000483064 ZNF608Q9ULD9 1512 aaPredicted RBP26.77■■□□□ 1.88
SNCG-204ENST00000483064 ABCC8Q09428 1581 aa26.76■■□□□ 1.87
SNCG-204ENST00000483064 DNMBPQ6XZF7 1577 aa26.65■■□□□ 1.86
SNCG-204ENST00000483064 EIF4G3O43432 1585 aaKnown RBP26.56■■□□□ 1.84
SNCG-204ENST00000483064 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.846e-6■■■■□ 25.1
SNCG-204ENST00000483064 RIMBP3CA6NJZ7 1639 aa26.54■■□□□ 1.84
SNCG-204ENST00000483064 RIMBP3BA6NNM3 1639 aa26.54■■□□□ 1.84
SNCG-204ENST00000483064 RIMBP3Q9UFD9 1639 aa26.54■■□□□ 1.84
SNCG-204ENST00000483064 POLA1P09884 1462 aaPredicted RBP26.5■■□□□ 1.83
SNCG-204ENST00000483064 FBLN2P98095 1184 aa26.5■■□□□ 1.83
SNCG-204ENST00000483064 TARBP1Q13395 1621 aaKnown RBP26.49■■□□□ 1.83
SNCG-204ENST00000483064 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
SNCG-204ENST00000483064 SOGA1O94964 1423 aa26.44■■□□□ 1.82
SNCG-204ENST00000483064 RAD54L2Q9Y4B4 1467 aa26.42■■□□□ 1.82
SNCG-204ENST00000483064 CYB5RLQ6IPT4 315 aa26.41■■□□□ 1.82
SNCG-204ENST00000483064 TDRD9Q8NDG6 1382 aaKnown RBP26.41■■□□□ 1.82
SNCG-204ENST00000483064 CHD1O14646 1710 aa26.34■■□□□ 1.81
SNCG-204ENST00000483064 FGD5Q6ZNL6 1462 aa26.33■■□□□ 1.81
SNCG-204ENST00000483064 CHMP7Q8WUX9 453 aaPredicted RBP26.28■■□□□ 1.8
SNCG-204ENST00000483064 CUX1P39880 1505 aa26.26■■□□□ 1.79
SNCG-204ENST00000483064 SNAPC4Q5SXM2 1469 aa26.25■■□□□ 1.79
SNCG-204ENST00000483064 WDR97A6NE52 1622 aa26.23■■□□□ 1.79
SNCG-204ENST00000483064 ARAP1Q96P48 1450 aa26.22■■□□□ 1.79
SNCG-204ENST00000483064 SUPT5HO00267 1087 aaKnown RBP26.21■■□□□ 1.79
SNCG-204ENST00000483064 GRIN2BQ13224 1484 aa26.2■■□□□ 1.78
SNCG-204ENST00000483064 MAGI1Q96QZ7 1491 aaPredicted RBP26.19■■□□□ 1.78
SNCG-204ENST00000483064 TRHP20396 242 aaPredicted RBP26.19■■□□□ 1.78
SNCG-204ENST00000483064 SYNJ2O15056 1496 aa26.11■■□□□ 1.77
SNCG-204ENST00000483064 SYNJ1O43426 1573 aa26.11■■□□□ 1.77
SNCG-204ENST00000483064 CLASP1Q7Z460 1538 aa26.09■■□□□ 1.77
SNCG-204ENST00000483064 GAPVD1Q14C86 1478 aa26.09■■□□□ 1.77
SNCG-204ENST00000483064 ABCA10Q8WWZ4 1543 aa26.03■■□□□ 1.76
SNCG-204ENST00000483064 WRNQ14191 1432 aaPredicted RBP eCLIP25.97■■□□□ 1.75
SNCG-204ENST00000483064 PBRM1Q86U86 1689 aa25.95■■□□□ 1.74
SNCG-204ENST00000483064 ABCA5Q8WWZ7 1642 aa25.92■■□□□ 1.74
SNCG-204ENST00000483064 GRIN2AQ12879 1464 aa25.84■■□□□ 1.73
SNCG-204ENST00000483064 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
SNCG-204ENST00000483064 FHAD1B1AJZ9 1412 aa25.77■■□□□ 1.72
SNCG-204ENST00000483064 BIVM-ERCC5R4GMW8 1640 aa25.77■■□□□ 1.72
SNCG-204ENST00000483064 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
SNCG-204ENST00000483064 NUP160Q12769 1436 aa25.75■■□□□ 1.71
SNCG-204ENST00000483064 CEP170Q5SW79 1584 aa25.7■■□□□ 1.71
SNCG-204ENST00000483064 ERICH3Q5RHP9 1530 aa25.69■■□□□ 1.7
SNCG-204ENST00000483064 ERCC6L2Q5T890 1561 aa25.67■■□□□ 1.7
SNCG-204ENST00000483064 JPH4Q96JJ6 628 aa25.58■■□□□ 1.69
SNCG-204ENST00000483064 SHROOM2Q13796 1616 aa25.57■■□□□ 1.68
SNCG-204ENST00000483064 PRG4Q92954 1404 aaPredicted RBP25.56■■□□□ 1.68
SNCG-204ENST00000483064 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
SNCG-204ENST00000483064 NPM1P06748 294 aaKnown RBP eCLIP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms