RNA–Protein interactions for RNA: ENST00000482807.1

RCAN3-206, Transcript of RCAN family member 3, humanhuman

TSL 3

Gene RCAN3, Length 497 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCAN3-206ENST00000482807 NISCHQ9Y2I1 1504 aa38.67■■■■□ 3.78
RCAN3-206ENST00000482807 ABCC9O60706 1549 aa35.01■■■■□ 3.2
RCAN3-206ENST00000482807 CCDC180Q9P1Z9 1646 aa34.75■■■■□ 3.15
RCAN3-206ENST00000482807 RB1CC1Q8TDY2 1594 aa33.18■■■□□ 2.9
RCAN3-206ENST00000482807 DNAJC5BQ9UF47 199 aa33.11■■■□□ 2.89
RCAN3-206ENST00000482807 NACADO15069 1562 aa32.92■■■□□ 2.86
RCAN3-206ENST00000482807 DCAF8L2P0C7V8 631 aa32.63■■■□□ 2.81
RCAN3-206ENST00000482807 PABPN1Q86U42 306 aaKnown RBP eCLIP32.56■■■□□ 2.8
RCAN3-206ENST00000482807 MYO15BQ96JP2 1530 aa32.43■■■□□ 2.78
RCAN3-206ENST00000482807 UNC13AQ9UPW8 1703 aa32.42■■■□□ 2.78
RCAN3-206ENST00000482807 BICRAQ9NZM4 1560 aa32.31■■■□□ 2.76
RCAN3-206ENST00000482807 ZCCHC6Q5VYS8 1495 aaKnown RBP32.03■■■□□ 2.72
RCAN3-206ENST00000482807 DCAF1Q9Y4B6 1507 aa31.94■■■□□ 2.7
RCAN3-206ENST00000482807 SHROOM4Q9ULL8 1493 aa31.81■■■□□ 2.68
RCAN3-206ENST00000482807 SCRIBQ14160 1630 aa31.67■■■□□ 2.66
RCAN3-206ENST00000482807 CC2D2AQ9P2K1 1620 aa31.6■■■□□ 2.65
RCAN3-206ENST00000482807 CECR2Q9BXF3 1484 aa31.57■■■□□ 2.64
RCAN3-206ENST00000482807 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.63
RCAN3-206ENST00000482807 DNAJC5Q9H3Z4 198 aa30.52■■■□□ 2.48
RCAN3-206ENST00000482807 NCAPD3P42695 1498 aa30.44■■■□□ 2.46
RCAN3-206ENST00000482807 ATAD2BQ9ULI0 1458 aa30.31■■■□□ 2.44
RCAN3-206ENST00000482807 CUX2O14529 1486 aa30.26■■■□□ 2.44
RCAN3-206ENST00000482807 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
RCAN3-206ENST00000482807 SMARCA4P51532 1647 aa30.19■■■□□ 2.42
RCAN3-206ENST00000482807 HMGXB3Q12766 1538 aa30.17■■■□□ 2.42
RCAN3-206ENST00000482807 SMARCA2P51531 1590 aa30.16■■■□□ 2.42
RCAN3-206ENST00000482807 NESP48681 1621 aa30.04■■■□□ 2.4
RCAN3-206ENST00000482807 BAZ1AQ9NRL2 1556 aaPredicted RBP30■■■□□ 2.39
RCAN3-206ENST00000482807 BAZ1BQ9UIG0 1483 aaKnown RBP29.96■■■□□ 2.39
RCAN3-206ENST00000482807 PEG3Q9GZU2 1588 aa29.94■■■□□ 2.38
RCAN3-206ENST00000482807 MROH2BQ7Z745 1585 aa29.81■■■□□ 2.36
RCAN3-206ENST00000482807 THOC2Q8NI27 1593 aaKnown RBP29.77■■■□□ 2.36
RCAN3-206ENST00000482807 LAMC3Q9Y6N6 1575 aa29.74■■■□□ 2.35
RCAN3-206ENST00000482807 KIF21AQ7Z4S6 1674 aa29.58■■■□□ 2.33
RCAN3-206ENST00000482807 PDS5BQ9NTI5 1447 aa29.57■■■□□ 2.32
RCAN3-206ENST00000482807 CADPSQ9ULU8 1353 aa29.48■■■□□ 2.31
RCAN3-206ENST00000482807 WIZO95785 1651 aa29.4■■■□□ 2.3
RCAN3-206ENST00000482807 MRC2Q9UBG0 1479 aa29.36■■■□□ 2.29
RCAN3-206ENST00000482807 WDR62O43379 1518 aa29.32■■■□□ 2.28
RCAN3-206ENST00000482807 CEP164Q9UPV0 1460 aa29.18■■■□□ 2.26
RCAN3-206ENST00000482807 FANCD2Q9BXW9 1451 aa29.15■■■□□ 2.26
RCAN3-206ENST00000482807 CFTRP13569 1480 aa29.12■■■□□ 2.25
RCAN3-206ENST00000482807 RSF1Q96T23 1441 aaPredicted RBP29.11■■■□□ 2.25
RCAN3-206ENST00000482807 TRIM41Q8WV44 630 aa29.03■■■□□ 2.24
RCAN3-206ENST00000482807 TOP2AP11388 1531 aaKnown RBP29.03■■■□□ 2.24
RCAN3-206ENST00000482807 URB2Q14146 1524 aaKnown RBP28.95■■■□□ 2.23
RCAN3-206ENST00000482807 OSCARQ8IYS5 282 aa28.8■■■□□ 2.2
RCAN3-206ENST00000482807 SUPT5HO00267 1087 aaKnown RBP28.78■■■□□ 2.2
RCAN3-206ENST00000482807 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
RCAN3-206ENST00000482807 PRDM2Q13029 1718 aa28.69■■■□□ 2.18
RCAN3-206ENST00000482807 ZNF608Q9ULD9 1512 aaPredicted RBP28.64■■■□□ 2.17
RCAN3-206ENST00000482807 IFT140Q96RY7 1462 aa28.61■■■□□ 2.17
RCAN3-206ENST00000482807 TOPBP1Q92547 1522 aa28.58■■■□□ 2.17
RCAN3-206ENST00000482807 RIMBP3CA6NJZ7 1639 aa28.48■■■□□ 2.15
RCAN3-206ENST00000482807 RIMBP3BA6NNM3 1639 aa28.48■■■□□ 2.15
RCAN3-206ENST00000482807 RIMBP3Q9UFD9 1639 aa28.48■■■□□ 2.15
RCAN3-206ENST00000482807 ABCC8Q09428 1581 aa28.45■■■□□ 2.14
RCAN3-206ENST00000482807 EIF4G3O43432 1585 aaKnown RBP28.43■■■□□ 2.14
RCAN3-206ENST00000482807 DNMBPQ6XZF7 1577 aa28.43■■■□□ 2.14
RCAN3-206ENST00000482807 ARHGEF11O15085 1522 aa28.4■■■□□ 2.14
RCAN3-206ENST00000482807 TARBP1Q13395 1621 aaKnown RBP28.35■■■□□ 2.13
RCAN3-206ENST00000482807 AQRO60306 1485 aaKnown RBP eCLIP28.32■■■□□ 2.12
RCAN3-206ENST00000482807 POLA1P09884 1462 aaPredicted RBP28.28■■■□□ 2.12
RCAN3-206ENST00000482807 CHD1O14646 1710 aa28.21■■■□□ 2.11
RCAN3-206ENST00000482807 RAD54L2Q9Y4B4 1467 aa28.18■■■□□ 2.1
RCAN3-206ENST00000482807 CYB5RLQ6IPT4 315 aa28.16■■■□□ 2.1
RCAN3-206ENST00000482807 ARAP1Q96P48 1450 aa28.12■■■□□ 2.09
RCAN3-206ENST00000482807 SOGA1O94964 1423 aa28.11■■■□□ 2.09
RCAN3-206ENST00000482807 TDRD9Q8NDG6 1382 aaKnown RBP28.11■■■□□ 2.09
RCAN3-206ENST00000482807 FBLN2P98095 1184 aa28.1■■■□□ 2.09
RCAN3-206ENST00000482807 FGD5Q6ZNL6 1462 aa28.06■■■□□ 2.08
RCAN3-206ENST00000482807 SNAPC4Q5SXM2 1469 aa28.02■■■□□ 2.08
RCAN3-206ENST00000482807 CUX1P39880 1505 aa28.02■■■□□ 2.08
RCAN3-206ENST00000482807 WDR97A6NE52 1622 aa28■■■□□ 2.07
RCAN3-206ENST00000482807 CLASP1Q7Z460 1538 aa27.97■■■□□ 2.07
RCAN3-206ENST00000482807 MAGI1Q96QZ7 1491 aaPredicted RBP27.92■■■□□ 2.06
RCAN3-206ENST00000482807 GRIN2BQ13224 1484 aa27.89■■■□□ 2.06
RCAN3-206ENST00000482807 TRHP20396 242 aaPredicted RBP27.87■■■□□ 2.05
RCAN3-206ENST00000482807 CHMP7Q8WUX9 453 aaPredicted RBP27.87■■■□□ 2.05
RCAN3-206ENST00000482807 SYNJ1O43426 1573 aa27.86■■■□□ 2.05
RCAN3-206ENST00000482807 SYNJ2O15056 1496 aa27.84■■■□□ 2.05
RCAN3-206ENST00000482807 GAPVD1Q14C86 1478 aa27.76■■■□□ 2.04
RCAN3-206ENST00000482807 ABCA10Q8WWZ4 1543 aa27.73■■■□□ 2.03
RCAN3-206ENST00000482807 PBRM1Q86U86 1689 aa27.73■■■□□ 2.03
RCAN3-206ENST00000482807 ABCA5Q8WWZ7 1642 aa27.71■■■□□ 2.03
RCAN3-206ENST00000482807 GRIN2AQ12879 1464 aa27.56■■■□□ 2
RCAN3-206ENST00000482807 WRNQ14191 1432 aaPredicted RBP eCLIP27.55■■■□□ 2
RCAN3-206ENST00000482807 ERCC6L2Q5T890 1561 aa27.52■■■□□ 2
RCAN3-206ENST00000482807 ADAMTS12P58397 1594 aa27.52■■■□□ 2
RCAN3-206ENST00000482807 NUP160Q12769 1436 aa27.5■■□□□ 1.99
RCAN3-206ENST00000482807 CEP170Q5SW79 1584 aa27.48■■□□□ 1.99
RCAN3-206ENST00000482807 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
RCAN3-206ENST00000482807 BIVM-ERCC5R4GMW8 1640 aa27.47■■□□□ 1.99
RCAN3-206ENST00000482807 FHAD1B1AJZ9 1412 aa27.41■■□□□ 1.98
RCAN3-206ENST00000482807 SHROOM2Q13796 1616 aa27.38■■□□□ 1.97
RCAN3-206ENST00000482807 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
RCAN3-206ENST00000482807 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
RCAN3-206ENST00000482807 PRG4Q92954 1404 aaPredicted RBP27.22■■□□□ 1.95
RCAN3-206ENST00000482807 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
RCAN3-206ENST00000482807 JPH4Q96JJ6 628 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms