RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 NISCHQ9Y2I1 1504 aa32.28■■■□□ 2.76
TMEM54-206ENST00000482771 ABCC9O60706 1549 aa29.4■■■□□ 2.3
TMEM54-206ENST00000482771 CCDC180Q9P1Z9 1646 aa28.92■■■□□ 2.22
TMEM54-206ENST00000482771 DNAJC5BQ9UF47 199 aa27.97■■■□□ 2.07
TMEM54-206ENST00000482771 RB1CC1Q8TDY2 1594 aa27.77■■■□□ 2.04
TMEM54-206ENST00000482771 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
TMEM54-206ENST00000482771 NACADO15069 1562 aa27.52■■■□□ 2
TMEM54-206ENST00000482771 PABPN1Q86U42 306 aaKnown RBP eCLIP27.47■■□□□ 1.99
TMEM54-206ENST00000482771 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
TMEM54-206ENST00000482771 MYO15BQ96JP2 1530 aa27.01■■□□□ 1.91
TMEM54-206ENST00000482771 BICRAQ9NZM4 1560 aa26.97■■□□□ 1.91
TMEM54-206ENST00000482771 ZCCHC6Q5VYS8 1495 aaKnown RBP26.63■■□□□ 1.85
TMEM54-206ENST00000482771 DCAF1Q9Y4B6 1507 aa26.58■■□□□ 1.85
TMEM54-206ENST00000482771 CECR2Q9BXF3 1484 aa26.5■■□□□ 1.83
TMEM54-206ENST00000482771 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
TMEM54-206ENST00000482771 CC2D2AQ9P2K1 1620 aa26.47■■□□□ 1.83
TMEM54-206ENST00000482771 SCRIBQ14160 1630 aa26.44■■□□□ 1.82
TMEM54-206ENST00000482771 EIF4G1Q04637 1599 aaKnown RBP26.33■■□□□ 1.81
TMEM54-206ENST00000482771 DNAJC5Q9H3Z4 198 aa25.86■■□□□ 1.73
TMEM54-206ENST00000482771 NCAPD3P42695 1498 aa25.48■■□□□ 1.67
TMEM54-206ENST00000482771 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
TMEM54-206ENST00000482771 CUX2O14529 1486 aa25.38■■□□□ 1.65
TMEM54-206ENST00000482771 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
TMEM54-206ENST00000482771 SMARCA2P51531 1590 aa25.21■■□□□ 1.63
TMEM54-206ENST00000482771 NESP48681 1621 aa25.18■■□□□ 1.62
TMEM54-206ENST00000482771 SMARCA4P51532 1647 aa25.17■■□□□ 1.62
TMEM54-206ENST00000482771 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
TMEM54-206ENST00000482771 BAZ1BQ9UIG0 1483 aaKnown RBP25.08■■□□□ 1.6
TMEM54-206ENST00000482771 BAZ1AQ9NRL2 1556 aaPredicted RBP25.03■■□□□ 1.6
TMEM54-206ENST00000482771 PEG3Q9GZU2 1588 aa24.91■■□□□ 1.58
TMEM54-206ENST00000482771 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
TMEM54-206ENST00000482771 LAMC3Q9Y6N6 1575 aa24.85■■□□□ 1.57
TMEM54-206ENST00000482771 PDS5BQ9NTI5 1447 aa24.83■■□□□ 1.57
TMEM54-206ENST00000482771 THOC2Q8NI27 1593 aaKnown RBP24.82■■□□□ 1.56
TMEM54-206ENST00000482771 CADPSQ9ULU8 1353 aa24.74■■□□□ 1.55
TMEM54-206ENST00000482771 KIF21AQ7Z4S6 1674 aa24.7■■□□□ 1.54
TMEM54-206ENST00000482771 TRIM41Q8WV44 630 aa24.65■■□□□ 1.54
TMEM54-206ENST00000482771 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.52
TMEM54-206ENST00000482771 WIZO95785 1651 aa24.53■■□□□ 1.52
TMEM54-206ENST00000482771 WDR62O43379 1518 aa24.47■■□□□ 1.51
TMEM54-206ENST00000482771 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
TMEM54-206ENST00000482771 FANCD2Q9BXW9 1451 aa24.4■■□□□ 1.5
TMEM54-206ENST00000482771 OSCARQ8IYS5 282 aa24.37■■□□□ 1.49
TMEM54-206ENST00000482771 CFTRP13569 1480 aa24.34■■□□□ 1.49
TMEM54-206ENST00000482771 RSF1Q96T23 1441 aaPredicted RBP24.32■■□□□ 1.48
TMEM54-206ENST00000482771 URB2Q14146 1524 aaKnown RBP24.2■■□□□ 1.47
TMEM54-206ENST00000482771 TOP2AP11388 1531 aaKnown RBP24.18■■□□□ 1.46
TMEM54-206ENST00000482771 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
TMEM54-206ENST00000482771 ZNF608Q9ULD9 1512 aaPredicted RBP23.99■■□□□ 1.43
TMEM54-206ENST00000482771 IFT140Q96RY7 1462 aa23.96■■□□□ 1.43
TMEM54-206ENST00000482771 TOPBP1Q92547 1522 aa23.89■■□□□ 1.42
TMEM54-206ENST00000482771 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
TMEM54-206ENST00000482771 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
TMEM54-206ENST00000482771 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
TMEM54-206ENST00000482771 PRDM2Q13029 1718 aa23.86■■□□□ 1.41
TMEM54-206ENST00000482771 CYB5RLQ6IPT4 315 aa23.85■■□□□ 1.41
TMEM54-206ENST00000482771 ABCC8Q09428 1581 aa23.83■■□□□ 1.41
TMEM54-206ENST00000482771 ARHGEF11O15085 1522 aa23.8■■□□□ 1.4
TMEM54-206ENST00000482771 FBLN2P98095 1184 aa23.8■■□□□ 1.4
TMEM54-206ENST00000482771 AQRO60306 1485 aaKnown RBP eCLIP23.79■■□□□ 1.45e-7■■■■■ 29.5
TMEM54-206ENST00000482771 DNMBPQ6XZF7 1577 aa23.73■■□□□ 1.39
TMEM54-206ENST00000482771 EIF4G3O43432 1585 aaKnown RBP23.71■■□□□ 1.39
TMEM54-206ENST00000482771 TRHP20396 242 aaPredicted RBP23.67■■□□□ 1.38
TMEM54-206ENST00000482771 TARBP1Q13395 1621 aaKnown RBP23.64■■□□□ 1.38
TMEM54-206ENST00000482771 POLA1P09884 1462 aaPredicted RBP23.63■■□□□ 1.37
TMEM54-206ENST00000482771 TDRD9Q8NDG6 1382 aaKnown RBP23.63■■□□□ 1.37
TMEM54-206ENST00000482771 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
TMEM54-206ENST00000482771 SOGA1O94964 1423 aa23.61■■□□□ 1.37
TMEM54-206ENST00000482771 CHD1O14646 1710 aa23.58■■□□□ 1.37
TMEM54-206ENST00000482771 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
TMEM54-206ENST00000482771 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
TMEM54-206ENST00000482771 SNAPC4Q5SXM2 1469 aa23.45■■□□□ 1.34
TMEM54-206ENST00000482771 FGD5Q6ZNL6 1462 aa23.45■■□□□ 1.34
TMEM54-206ENST00000482771 CUX1P39880 1505 aa23.38■■□□□ 1.33
TMEM54-206ENST00000482771 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
TMEM54-206ENST00000482771 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
TMEM54-206ENST00000482771 CLASP1Q7Z460 1538 aa23.33■■□□□ 1.33
TMEM54-206ENST00000482771 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
TMEM54-206ENST00000482771 WDR97A6NE52 1622 aa23.31■■□□□ 1.32
TMEM54-206ENST00000482771 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
TMEM54-206ENST00000482771 GAPVD1Q14C86 1478 aa23.26■■□□□ 1.31
TMEM54-206ENST00000482771 SUPT5HO00267 1087 aaKnown RBP23.22■■□□□ 1.31
TMEM54-206ENST00000482771 AEBP2Q6ZN18 517 aaPredicted RBP23.18■■□□□ 1.3
TMEM54-206ENST00000482771 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
TMEM54-206ENST00000482771 PBRM1Q86U86 1689 aa23.11■■□□□ 1.29
TMEM54-206ENST00000482771 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.28
TMEM54-206ENST00000482771 ABCA5Q8WWZ7 1642 aa23.06■■□□□ 1.28
TMEM54-206ENST00000482771 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
TMEM54-206ENST00000482771 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
TMEM54-206ENST00000482771 NUP160Q12769 1436 aa22.98■■□□□ 1.27
TMEM54-206ENST00000482771 FHAD1B1AJZ9 1412 aa22.96■■□□□ 1.27
TMEM54-206ENST00000482771 CEP170Q5SW79 1584 aa22.94■■□□□ 1.26
TMEM54-206ENST00000482771 JPH4Q96JJ6 628 aa22.91■■□□□ 1.26
TMEM54-206ENST00000482771 ADAMTS12P58397 1594 aa22.91■■□□□ 1.26
TMEM54-206ENST00000482771 TOP2BQ02880 1626 aa22.88■■□□□ 1.25
TMEM54-206ENST00000482771 PRG4Q92954 1404 aaPredicted RBP22.85■■□□□ 1.25
TMEM54-206ENST00000482771 BIVM-ERCC5R4GMW8 1640 aa22.84■■□□□ 1.25
TMEM54-206ENST00000482771 ERICH3Q5RHP9 1530 aa22.83■■□□□ 1.25
TMEM54-206ENST00000482771 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
TMEM54-206ENST00000482771 NPM1P06748 294 aaKnown RBP eCLIP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms